Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0500300-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:19077936:19081520:1 gene:Os10g0500300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os10t0500300-00)
Sequence

ATGCGGAAGGCGTACAAGGACTCGTTCAAGGTGCTCGAAGCTGACATCCAGCACGCCAAC
ACCCTGGCCTCCGAATTTCCCCGGGAGTACGATGGCGCGTGCCTGCAGATGCGGCTCTCG
TATAGCCCCGCGGCGCATATATTCCTCTTCCTGGTGCAGTGGACTGACTGCAGCCTCGCC
GGGGCTCTCGGCTTGCTGAGGATCCTCGTCTACAAGGTTTATGTCGACGGGACGACGACA
ATGTCTACCCATGAGAGGAAAGCCAGCATCAAAGAATTCTACGCTGTGATATTTCCTTCT
CTGCTGCAACTGCAAAGGGGGATTACTGATACGGAGGACAAAAAGCAGAAGGCCGTGTGC
ATGGAGAGGTACAGAAGGAGAGATGAGGATGAAAGAAACATCTTATCCGAAATTGATGCC
GAGAGAGAAGAGGAGTGCGGGATTTGCATGGAGATGAACAGCAAAGTGGTGTTGCCCAAC
TGCACCCATAATATGTGCCTCAGATGCTACCAGGACTGGAATTCAAGATCACAGTCTTGT
CCATTCTGCCGTGACAACTTGAAGAAGACTGACCCTGGTGACTTATGGATCTATGTTGAG
GACCAAGATGTGGTTGACTTGGAGACAGTGTCAAGAGAGAACCTCAGAAGGCTGTTCATG
TACATAAACAAGCTGCCTCTGATTGTTCCGGATGTCATCTTCAGTATTTATGATTCCCAC
ATAAAATGA

Peptide Sequence

PEP ID

Os10t0500300-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:19077936:19081520:1 gene:Os10g0500300 transcript:Os10t0500300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os10t0500300-00)
Sequence

MRKAYKDSFKVLEADIQHANTLASEFPREYDGACLQMRLSYSPAAHIFLFLVQWTDCSLA
GALGLLRILVYKVYVDGTTTMSTHERKASIKEFYAVIFPSLLQLQRGITDTEDKKQKAVC
MERYRRRDEDERNILSEIDAEREEECGICMEMNSKVVLPNCTHNMCLRCYQDWNSRSQSC
PFCRDNLKKTDPGDLWIYVEDQDVVDLETVSRENLRRLFMYINKLPLIVPDVIFSIYDSH
IK

Transcript Sequence

Transcript ID

Os10t0500300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:19077936:19081520:1 gene:Os10g0500300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os10t0500300-00)
Sequence

CGCACGCGCCCCGACGCGGCACGCCACCGCGGCGCGCCACGGCGCACACGTGGCGCCGGC
CGGAGCGCGCGCGCGCCTCCGCCTGCGCGCCCGGCACGCACACTCGCGTCGCGTCGCGTC
GGTCCCTGCCACCACACCACACCACACCCACCCACCCCCCTCCCGCCCTCCCACCGCACG
GCGCACGCTCGCGATCGCGAACCCCCCCAGCGAGGGCAAGGAAGGGAGAGGAGACGAGGA
ATCTGAGCGCGCGCGAGCGAGCGAGCGCAAGGGTGGGTGGTTCCGGCCGCGGCGGGGGGG
TTGCCCCGGGGTTGGATGAGAAGGAGGGCGTCGGCGTCGGCGTCGGCGGCGGCGGTGGAG
GCGGTGGCGGTGGTGGCGGTGGTGGAGGATGCGGAAGGCGTACAAGGACTCGTTCAAGGT
GCTCGAAGCTGACATCCAGCACGCCAACACCCTGGCCTCCGAATTTCCCCGGGAGTACGA
TGGCGCGTGCCTGCAGATGCGGCTCTCGTATAGCCCCGCGGCGCATATATTCCTCTTCCT
GGTGCAGTGGACTGACTGCAGCCTCGCCGGGGCTCTCGGCTTGCTGAGGATCCTCGTCTA
CAAGGTTTATGTCGACGGGACGACGACAATGTCTACCCATGAGAGGAAAGCCAGCATCAA
AGAATTCTACGCTGTGATATTTCCTTCTCTGCTGCAACTGCAAAGGGGGATTACTGATAC
GGAGGACAAAAAGCAGAAGGCCGTGTGCATGGAGAGGTACAGAAGGAGAGATGAGGATGA
AAGAAACATCTTATCCGAAATTGATGCCGAGAGAGAAGAGGAGTGCGGGATTTGCATGGA
GATGAACAGCAAAGTGGTGTTGCCCAACTGCACCCATAATATGTGCCTCAGATGCTACCA
GGACTGGAATTCAAGATCACAGTCTTGTCCATTCTGCCGTGACAACTTGAAGAAGACTGA
CCCTGGTGACTTATGGATCTATGTTGAGGACCAAGATGTGGTTGACTTGGAGACAGTGTC
AAGAGAGAACCTCAGAAGGCTGTTCATGTACATAAACAAGCTGCCTCTGATTGTTCCGGA
TGTCATCTTCAGTATTTATGATTCCCACATAAAATGACTCGCAACGCTGCTTCGTCGACG
GCCTTCAGCCAATGCTCTGTTCTGATTAAGCTATGCCCCCAAGTTCTCCATTTCCATGCT
TAGACTCAAGCTCTTGGAAATGCCTGAACCGTTGTGGAGACACAAACCTCCTGGTCGTGT
TGTAGAACTTATTTAGTGGTTACATGCGTCCTATCTTCAAGCATATCAAAGCCAGCTTGT
ATATATCTGACATGGCTCTGTCAATAGAGAACTTGTGCATGCCCCAAATGGAGGCAGTGC
TGTTTGTTACT