Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0498200-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:18998799:19000906:1 gene:Os10g0498200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Epoxide hydrolase family protein. (Os10t0498200-01)
Sequence

ATGGCCACGGCGGAGCAGCGGCAGATCGAGCACGTCCACCTCCCCGTGCGGGGGCTCACC
CTCCACGTCGCGCAAGCCGGCAAAGGGGAGCTCGGGACGGTGGTGTTCCTGCACGGGTTC
CCGGAGATATGGTACTCGTGGCGCCACCAGATGCTCGCCGTCGCCGCCGCAGGGTACCGC
GCCGTCGCGCCGGACTGGCGTGGGTACGGGCTCTCCGACCAGCCGCCGGAGCCGGAGGCG
GCGGTGTACGACGACCTCATCGAGGATCTCCTCGCCATCCTCGACGCCCTCGCCGTGCCC
AAGGCATTCCTTGTTGGAAAGGATTTTGGGGCAATGCCAGCTTACGACTTTGCTCTCCGT
CACCCAAACCGCACATGTGGTGTGATGTGTCTGGGCATCCCCTTAGGCACTGCTGGTTTG
TCCTTTGACACATTGCCAGAAGGATTCTACATTTTACGTTGGGCGCAACCAGGAAGAGCA
GAAGCTGACTTTGGCAAGTATGATGTAAAGAGAGTTGTGCGCACCATCTACATACTATTC
TCTAGGAGCGAGATCCCCATAGCTAAGGAAAATCAAGAGATCATGGATCTTGCAGACTTA
TCGACACCCCTTCCCGAGTGGTTTAGTGAGGAGGATCTTGATGTCTACTCATCCCTCTAT
GAGAATTCTGGTTTTAGATATCCGCTACAGATGCCATATAGGTCTCTGCACCAGAGAAAA
CCAATTGGAGATGCAAAATTCCAAGTCCCAGTGTTTATTGTCATGGGAGAAAAAGATTAT
GTCTTTAAGTTCCCTGGTATCGAGTCTGCTATGAAAGACGGAACTATGGAGAAGCATGCA
CCAAACATAAAGATCACCTACATCCCTGAAGGAGGGCATTTTGTGCAGGAGCAGTTCCGT
GACTATGTGAATGAGCTCCTTCTTGGCTTCTTGAAAGATCATCCTGTGGTTATATAA

Peptide Sequence

PEP ID

Os10t0498200-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:18998799:19000906:1 gene:Os10g0498200 transcript:Os10t0498200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Epoxide hydrolase family protein. (Os10t0498200-01)
Sequence

MATAEQRQIEHVHLPVRGLTLHVAQAGKGELGTVVFLHGFPEIWYSWRHQMLAVAAAGYR
AVAPDWRGYGLSDQPPEPEAAVYDDLIEDLLAILDALAVPKAFLVGKDFGAMPAYDFALR
HPNRTCGVMCLGIPLGTAGLSFDTLPEGFYILRWAQPGRAEADFGKYDVKRVVRTIYILF
SRSEIPIAKENQEIMDLADLSTPLPEWFSEEDLDVYSSLYENSGFRYPLQMPYRSLHQRK
PIGDAKFQVPVFIVMGEKDYVFKFPGIESAMKDGTMEKHAPNIKITYIPEGGHFVQEQFR
DYVNELLLGFLKDHPVVI

Transcript Sequence

Transcript ID

Os10t0498200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:18998799:19000906:1 gene:Os10g0498200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Epoxide hydrolase family protein. (Os10t0498200-01)
Sequence

ACCTCACACTCCCACCACCGTCACGTCGCCCCTCTGCTCTCTGCACTGCTGCGGCGAGGA
GCTAGCTCGAGCCGGCCGGAAGCCATGGCCACGGCGGAGCAGCGGCAGATCGAGCACGTC
CACCTCCCCGTGCGGGGGCTCACCCTCCACGTCGCGCAAGCCGGCAAAGGGGAGCTCGGG
ACGGTGGTGTTCCTGCACGGGTTCCCGGAGATATGGTACTCGTGGCGCCACCAGATGCTC
GCCGTCGCCGCCGCAGGGTACCGCGCCGTCGCGCCGGACTGGCGTGGGTACGGGCTCTCC
GACCAGCCGCCGGAGCCGGAGGCGGCGGTGTACGACGACCTCATCGAGGATCTCCTCGCC
ATCCTCGACGCCCTCGCCGTGCCCAAGGCATTCCTTGTTGGAAAGGATTTTGGGGCAATG
CCAGCTTACGACTTTGCTCTCCGTCACCCAAACCGCACATGTGGTGTGATGTGTCTGGGC
ATCCCCTTAGGCACTGCTGGTTTGTCCTTTGACACATTGCCAGAAGGATTCTACATTTTA
CGTTGGGCGCAACCAGGAAGAGCAGAAGCTGACTTTGGCAAGTATGATGTAAAGAGAGTT
GTGCGCACCATCTACATACTATTCTCTAGGAGCGAGATCCCCATAGCTAAGGAAAATCAA
GAGATCATGGATCTTGCAGACTTATCGACACCCCTTCCCGAGTGGTTTAGTGAGGAGGAT
CTTGATGTCTACTCATCCCTCTATGAGAATTCTGGTTTTAGATATCCGCTACAGATGCCA
TATAGGTCTCTGCACCAGAGAAAACCAATTGGAGATGCAAAATTCCAAGTCCCAGTGTTT
ATTGTCATGGGAGAAAAAGATTATGTCTTTAAGTTCCCTGGTATCGAGTCTGCTATGAAA
GACGGAACTATGGAGAAGCATGCACCAAACATAAAGATCACCTACATCCCTGAAGGAGGG
CATTTTGTGCAGGAGCAGTTCCGTGACTATGTGAATGAGCTCCTTCTTGGCTTCTTGAAA
GATCATCCTGTGGTTATATAAATGCTATTGTAGCCTCAGTTGTGCTTCACCCGTAGTTCA
AGTTGGCTTAGAAAACGTTGTGCTATATCATGGTATGAATTTGTCAACAAACTAAGGATC
AGCTATGGCTAGTTTGTTACTTTCAGTAATGCCTATTTGAGCTTGTTGTATCTAGGTTGT
CCTGCTGGTGTTACTAGCAATGTAAAGACTAAACCCATTGCTATACTTCTACCATG