Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0497900-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:18986705:18988981:1 gene:Os10g0497900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Lanthionine synthetase C-like protein, expressed. (Os10t0497900-01);Similar to Lanthionine synthetase C-like protein, expressed. (Os10t0497900-02)
Sequence	ATGGCGGACCGCTACTTCCCCAACGACCTCCCGGACTTCGTCGCCGAGGCCCCCGACGGC GGCCGCGGCTTGCTGTCGCTCCCTTACTCCAGCCTCTCCGAAAGGCTCCTCCGCGCCGCG CTCCGGATCAAGGACAAGGTCATGGAGGAGACGTGGACCAGGGCGCGGCGACAGGTGACG GACTACACGCTCTACACGGGCGCGCTCGGCACGGCGCTCCTGCTGTTCAAGTCCTTCCAG GTCACCGGCAACCGCGCCGACCTCGCCCTCGCCGGCGACATCGTCAAGGAGTGCGACGCC GCGTCGCGTGGCCTGCCACGCAGGTTCTTGACATTCATCTGTGGGAGGGCTGGGGTTTGC GCTCTTGGTGCAGTGATTGCAAAACATTGCAATGACCAGCTGCTACTCACACACTACCTG AGCTCATTTGATGAGATAATAGTCACTGAGAAAGTTCCCAATGAGTTGTTATATGGAAGA GCAGGGTATTTGTGGGCTTGCTTGTTCTTGAATACGCATCTCGGCGAGAAGACAATTCCC CATGAGCACATTACTTCTGTGGCAAAGGACATCATCGATGAGGGAAGAAAGCTGGCTAAA AAGGGGAACTGCCCCCTGATGTATGAATGGCATGGAAAGAAGTACTGGGGTGCTGCTCAT GGGCTTGCTGGCATTATGCATGTCCTCATGCACACTGAACTCAAGCTAGATGAGAAGGAT GATGTTAAGAACACTCTGCTATACATGATCAGGAACAGGTATCCTACTGGCAACTATCCA TCGAGTGAAGGCAGTGAATCTGACCGCTTGGTGCATTGGTGCCATGGTGCCCCTGGTGTT GCTCTTACACTCGCTAAAGCTTATCAGGTCTTCCATGATGAACATTTCAAGCAGACGGCT GCAGAGGCTGCAGAAGTTGTCTGGAACCGGGGACTTCTCAAGAGAGTTGGAATATGCCAT GGTGTAAGTGGGAACGCCTATGTATTTCTCTCACTCTACCGGCTAACTGGCAATGTTGAG TACCTGTACCGGGCTAAGGCTTTTGCTTGCTTTCTGCTTGAGAAAGCTGATCAGTTGATT GCTGATGGGGCCATGCATGGGGGTGATCACCCATTTTCATTGTTTGAAGGGAGGGCTGGG ATGGCTTACCTCCTTCTAGACATGGTTAGCCCATCAGAATCAAAGTTCCCGGCCTATGAG CTTTGA

Peptide Sequence

PEP ID	Os10t0497900-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:18986705:18988981:1 gene:Os10g0497900 transcript:Os10t0497900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Lanthionine synthetase C-like protein, expressed. (Os10t0497900-01);Similar to Lanthionine synthetase C-like protein, expressed. (Os10t0497900-02)
Sequence	MADRYFPNDLPDFVAEAPDGGRGLLSLPYSSLSERLLRAALRIKDKVMEETWTRARRQVT DYTLYTGALGTALLLFKSFQVTGNRADLALAGDIVKECDAASRGLPRRFLTFICGRAGVC ALGAVIAKHCNDQLLLTHYLSSFDEIIVTEKVPNELLYGRAGYLWACLFLNTHLGEKTIP HEHITSVAKDIIDEGRKLAKKGNCPLMYEWHGKKYWGAAHGLAGIMHVLMHTELKLDEKD DVKNTLLYMIRNRYPTGNYPSSEGSESDRLVHWCHGAPGVALTLAKAYQVFHDEHFKQTA AEAAEVVWNRGLLKRVGICHGVSGNAYVFLSLYRLTGNVEYLYRAKAFACFLLEKADQLI ADGAMHGGDHPFSLFEGRAGMAYLLLDMVSPSESKFPAYEL

Transcript Sequence

Transcript ID	Os10t0497900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:18986705:18988981:1 gene:Os10g0497900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Lanthionine synthetase C-like protein, expressed. (Os10t0497900-01);Similar to Lanthionine synthetase C-like protein, expressed. (Os10t0497900-02)
Sequence	GGGAAACGGTGGTGGTGGGAACAAGAAGGGGAGGAGAGACTCGCCGTCGCCGCCGCTCGA GACCCCCCCGCGCGGCGAGTTGCCGTCGACGTCGTCGTCCTCCTCCTCGCGCGCCACCAA GCGTCACCGCGTGGCGGGCATGGCGGACCGCTACTTCCCCAACGACCTCCCGGACTTCGT CGCCGAGGCCCCCGACGGCGGCCGCGGCTTGCTGTCGCTCCCTTACTCCAGCCTCTCCGA AAGGCTCCTCCGCGCCGCGCTCCGGATCAAGGACAAGGTCATGGAGGAGACGTGGACCAG GGCGCGGCGACAGGTGACGGACTACACGCTCTACACGGGCGCGCTCGGCACGGCGCTCCT GCTGTTCAAGTCCTTCCAGGTCACCGGCAACCGCGCCGACCTCGCCCTCGCCGGCGACAT CGTCAAGGAGTGCGACGCCGCGTCGCGTGGCCTGCCACGCAGGTTCTTGACATTCATCTG TGGGAGGGCTGGGGTTTGCGCTCTTGGTGCAGTGATTGCAAAACATTGCAATGACCAGCT GCTACTCACACACTACCTGAGCTCATTTGATGAGATAATAGTCACTGAGAAAGTTCCCAA TGAGTTGTTATATGGAAGAGCAGGGTATTTGTGGGCTTGCTTGTTCTTGAATACGCATCT CGGCGAGAAGACAATTCCCCATGAGCACATTACTTCTGTGGCAAAGGACATCATCGATGA GGGAAGAAAGCTGGCTAAAAAGGGGAACTGCCCCCTGATGTATGAATGGCATGGAAAGAA GTACTGGGGTGCTGCTCATGGGCTTGCTGGCATTATGCATGTCCTCATGCACACTGAACT CAAGCTAGATGAGAAGGATGATGTTAAGAACACTCTGCTATACATGATCAGGAACAGGTA TCCTACTGGCAACTATCCATCGAGTGAAGGCAGTGAATCTGACCGCTTGGTGCATTGGTG CCATGGTGCCCCTGGTGTTGCTCTTACACTCGCTAAAGCTTATCAGGTCTTCCATGATGA ACATTTCAAGCAGACGGCTGCAGAGGCTGCAGAAGTTGTCTGGAACCGGGGACTTCTCAA GAGAGTTGGAATATGCCATGGTGTAAGTGGGAACGCCTATGTATTTCTCTCACTCTACCG GCTAACTGGCAATGTTGAGTACCTGTACCGGGCTAAGGCTTTTGCTTGCTTTCTGCTTGA GAAAGCTGATCAGTTGATTGCTGATGGGGCCATGCATGGGGGTGATCACCCATTTTCATT GTTTGAAGGGAGGGCTGGGATGGCTTACCTCCTTCTAGACATGGTTAGCCCATCAGAATC AAAGTTCCCGGCCTATGAGCTTTGAAGGGCATCATAAATATATGTATCCTGTTAGGATCA AATGCTCAGTGATCCATCCATCCAAAGTAGCTGTATTGTGTTTTCTTGCGTACCCAGTAA TGTGTGCATTGTAATTTGTTGTCTTTGTAAAGTTCAGTATCCAGATGGTGCAAGCTTGAA CCTTTGTAAAATACATGTTTGAGGGAGTTCCTTGAAATATGATAATATTTATGTTGGTTG TTGCCTCTATTTGTTTACTGAATAAAATATAGTTTTGCCTCC