Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0496900-02
CDS Infomation

cds chromosome:IRGSP-1.0:10:18900290:18904022:1 gene:Os10g0496900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FADED GREEN LEAF description:Similar to Protochlorophyllide reductase B, chloroplastic. (Os10t0496900-01);NADPH: protochlorophyllide oxidoreductase, Chlorophyll synthesis (Os10t0496900-02)
Sequence

ATGGCTCTCCAGGCGGCCACCACCACCTCCTTCCTCCCCTCCGCGCTCTCCGCCCGCAAG
GAGGGAGCGGTGAAGGACTCGGCGTTCTTGGGCGTTCGTCTCGGCGACGGGCTCAAGCTG
GAGACCAGTGCTCTCGGCCTTCGCACCAAGAGGGTGAGCACGTCGTCGGTGGCCATCCGC
GCGCAGGCGTCGGCGGCGGTGTCGTCCCCGACGGTGACGCCGGCGTCGCCGTCGGGCAAG
CAGACGCTGCGCAAGGGCACGGCGGTCATCACCGGCGCGTCGTCCGGGCTTGGCCTCGCG
ACGGCGAAGGCGCTGGCGGAGACGGGCAGGTGGCACGTCGTCATGGGGTGCCGCGACTTC
CTCAAGGCGTCGCGCGCCGCCAAGGCCGCCGGCATGGAGAAGGGCAGCTACACCATCGTC
CACCTCGACCTGGCGTCGCTCGACAGCGTCAGGCAGTTCGTCGCCAACGTCCGGCGGCTG
GAGATGCCCGTCGACGTGGTGGTGTGCAACGCCGCCGTGTACCAGCCCACCGCCAAGCAG
CCGAGCTTCACCGCCGACGGCTTCGAGATGAGCGTCGGCGTCAACCACCTCGGGCACTTC
CTCCTCGCCCGCGAGCTCCTCGCCGACCTCACCTCCTCCGACTACCCCTCCAAGCGCCTC
ATCATCGTCGGCTCCATCACCGGGAACACGAACACGCTGGCGGGGAACGTGCCGCCGAAG
GCGAACCTGGGGGACCTCCGGGGGCTCGCCTCGGGCCTCGACGGCGTGTCGAGCTCCGCC
ATGATCGACGGCGGCGAGTTCGACGGCGCCAAGGCCTACAAGGACAGCAAGGTGTGCAAC
ATGCTGACGATGCAGGAGTTCCACCGCCGGTACCACGGCGAGACCGGGGTGACGTTCGCG
TCGCTCTACCCCGGGTGCATCGCCACCACGGGCCTCTTCCGGGAGCACGTCCCGCTGTTC
CGCCTCCTCTTCCCGCCCTTCCAGAAGTACATCACCAAGGGCTACGTCTCCGAGGAGGAG
GCCGGCAAGCGGCTGGCCCAGGTCGTCAGTGACCCCAGCCTCACCAAGTCCGGGGTGTAC
TGGAGCTGGAACAACAACTCGGCCTCGTTCGAGAACCAGCTCTCCGAGGAGGCCTCCGAT
CCGGAGAAGGCCAAGAAGGTCTGGGAGCTCAGCGAGAAGCTCGTCGGCTTGGCCGATCAC
GATCAGTGA

Peptide Sequence

PEP ID

Os10t0496900-02
PEP Infomation

pep chromosome:IRGSP-1.0:10:18900290:18904022:1 gene:Os10g0496900 transcript:Os10t0496900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FADED GREEN LEAF description:Similar to Protochlorophyllide reductase B, chloroplastic. (Os10t0496900-01);NADPH: protochlorophyllide oxidoreductase, Chlorophyll synthesis (Os10t0496900-02)
Sequence

MALQAATTTSFLPSALSARKEGAVKDSAFLGVRLGDGLKLETSALGLRTKRVSTSSVAIR
AQASAAVSSPTVTPASPSGKQTLRKGTAVITGASSGLGLATAKALAETGRWHVVMGCRDF
LKASRAAKAAGMEKGSYTIVHLDLASLDSVRQFVANVRRLEMPVDVVVCNAAVYQPTAKQ
PSFTADGFEMSVGVNHLGHFLLARELLADLTSSDYPSKRLIIVGSITGNTNTLAGNVPPK
ANLGDLRGLASGLDGVSSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHGETGVTFA
SLYPGCIATTGLFREHVPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVY
WSWNNNSASFENQLSEEASDPEKAKKVWELSEKLVGLADHDQ

Transcript Sequence

Transcript ID

Os10t0496900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:18900290:18904022:1 gene:Os10g0496900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FADED GREEN LEAF description:Similar to Protochlorophyllide reductase B, chloroplastic. (Os10t0496900-01);NADPH: protochlorophyllide oxidoreductase, Chlorophyll synthesis (Os10t0496900-02)
Sequence

TCTTCTTCTTCTAGCTTAGAACCCCAACCCCCCAAAGCCTCACTCACTTCGCTGCAGAGG
AAAAAAAAGAGAGAAAAATCTCCGATGGCTCTCCAGGCGGCCACCACCACCTCCTTCCTC
CCCTCCGCGCTCTCCGCCCGCAAGGAGGGAGCGGTGAAGGACTCGGCGTTCTTGGGCGTT
CGTCTCGGCGACGGGCTCAAGCTGGAGACCAGTGCTCTCGGCCTTCGCACCAAGAGGGTG
AGCACGTCGTCGGTGGCCATCCGCGCGCAGGCGTCGGCGGCGGTGTCGTCCCCGACGGTG
ACGCCGGCGTCGCCGTCGGGCAAGCAGACGCTGCGCAAGGGCACGGCGGTCATCACCGGC
GCGTCGTCCGGGCTTGGCCTCGCGACGGCGAAGGCGCTGGCGGAGACGGGCAGGTGGCAC
GTCGTCATGGGGTGCCGCGACTTCCTCAAGGCGTCGCGCGCCGCCAAGGCCGCCGGCATG
GAGAAGGGCAGCTACACCATCGTCCACCTCGACCTGGCGTCGCTCGACAGCGTCAGGCAG
TTCGTCGCCAACGTCCGGCGGCTGGAGATGCCCGTCGACGTGGTGGTGTGCAACGCCGCC
GTGTACCAGCCCACCGCCAAGCAGCCGAGCTTCACCGCCGACGGCTTCGAGATGAGCGTC
GGCGTCAACCACCTCGGGCACTTCCTCCTCGCCCGCGAGCTCCTCGCCGACCTCACCTCC
TCCGACTACCCCTCCAAGCGCCTCATCATCGTCGGCTCCATCACCGGGAACACGAACACG
CTGGCGGGGAACGTGCCGCCGAAGGCGAACCTGGGGGACCTCCGGGGGCTCGCCTCGGGC
CTCGACGGCGTGTCGAGCTCCGCCATGATCGACGGCGGCGAGTTCGACGGCGCCAAGGCC
TACAAGGACAGCAAGGTGTGCAACATGCTGACGATGCAGGAGTTCCACCGCCGGTACCAC
GGCGAGACCGGGGTGACGTTCGCGTCGCTCTACCCCGGGTGCATCGCCACCACGGGCCTC
TTCCGGGAGCACGTCCCGCTGTTCCGCCTCCTCTTCCCGCCCTTCCAGAAGTACATCACC
AAGGGCTACGTCTCCGAGGAGGAGGCCGGCAAGCGGCTGGCCCAGGTCGTCAGTGACCCC
AGCCTCACCAAGTCCGGGGTGTACTGGAGCTGGAACAACAACTCGGCCTCGTTCGAGAAC
CAGCTCTCCGAGGAGGCCTCCGATCCGGAGAAGGCCAAGAAGGTCTGGGAGCTCAGCGAG
AAGCTCGTCGGCTTGGCCGATCACGATCAGTGAGTGAGAGTGATGTGCTATTGATTTTCG
TCTAGGATTTTGCTGTGCTCTTCTTCTTCTTCTCCTCTCTACCAAGAAAGATCGATGGAG
GAGAATTTGTAGGACGCGTTTCTCACGAATTACTTAGCTGTTAATGATCAGCTTGATGTG
TACGATATGATGGTGCAGAGTGAAAGTTGTGTTGTTCACTGGTGGATCATGGGATGGGAA
TATGGGATTGTTGTAAGATGTAACTCAAGTGTTTTCTTTTTTGGGATTACTTTTGGTAAT
AAGAGCTTGGGTGATCGAAAACTACAGATGGTTTTTCTTTTAAGTTGTATGATCTCTGTA
GAGTTTTTGAGTAATTTGTAGTTTTGTACCCTATCAAAGATCATCTCTAGCTGCCTCTGA
GCTCTCCAACTCTATATGTCCATCTCTAGTATATATGTCCCATATTTCTGACTGAAAATT
TTCAAGTCGGTTGGTTCCCTCCGCC