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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0496000-02
CDS Infomation

cds chromosome:IRGSP-1.0:10:18873532:18875014:-1 gene:Os10g0496000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA BINDING WITH ONE FINGER 27 description:Zinc finger, Dof-type family protein. (Os10t0496000-02)
Sequence

ATGTCGTCGCCGTTCCTGGGCTCTTCTTCCTCTTCCGCTTCGTCGCCCCTCTCTTACCTG
ACCCCGCCTAGGCCTCCTCCTCCTCCTCCTCCCCTTCTCATGGGGCAGGGATACGCCGCT
GCTGCCAATGGCGGAATTGGCGGCGGCGGCGTCGAGGCGGTGAACGCGGCGGCGGCGCCG
AGGCAGGGTGGCAGGCACGCCGGGCACCCGCCGCTGCCGAGGCCGCCGCCGAGGCAGTGC
CCGCGGTGCGGCTCGGCGAACACCAAGTTCTGCTACTACAACAACTACAGCCGCACGCAG
CCGCGGTACCTCTGCAAGGCGTGCCGCCGCCACTGGACGGAGGGCGGCACGCTCCGCGAC
GTCCCCGTCGGCGGCGGCCGCAAGAACAGCAAGCGCGCCGCCGGCGGAGGCAAGGCCGGC
GCCACAGCCTCGACGGCGGCTTCTGCCCATGTCGTCGCGCCGGCGGCGGCGCCGCCGACG
TCGTCGTCGTTCCCCGATCTCCTGAGGCAGATGCTGATGGCGCCGGCTACCGCCGGTGGC
GGAGGCGGCTACAGCATCGACCTGACCGCGTGGCAGCAAATGGCGGCGTTCGCGGCTCCA
CCTCAGGCCGCCACCGGCGATGTCGGCGGCGCGGTCGGAGCGGCGTCGACGGCGGCGCCG
GACGCGAACTGCGGCGGCGGCGGCGTGCAGTACTGGAACGGGTGGCTGCAAGATGACATG
CCCGGTCTAGATGGTTCATGTTAA

Peptide Sequence

PEP ID

Os10t0496000-02
PEP Infomation

pep chromosome:IRGSP-1.0:10:18873532:18875014:-1 gene:Os10g0496000 transcript:Os10t0496000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA BINDING WITH ONE FINGER 27 description:Zinc finger, Dof-type family protein. (Os10t0496000-02)
Sequence

MSSPFLGSSSSSASSPLSYLTPPRPPPPPPPLLMGQGYAAAANGGIGGGGVEAVNAAAAP
RQGGRHAGHPPLPRPPPRQCPRCGSANTKFCYYNNYSRTQPRYLCKACRRHWTEGGTLRD
VPVGGGRKNSKRAAGGGKAGATASTAASAHVVAPAAAPPTSSSFPDLLRQMLMAPATAGG
GGGYSIDLTAWQQMAAFAAPPQAATGDVGGAVGAASTAAPDANCGGGGVQYWNGWLQDDM
PGLDGSC

Transcript Sequence

Transcript ID

Os10t0496000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:18873532:18875014:-1 gene:Os10g0496000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA BINDING WITH ONE FINGER 27 description:Zinc finger, Dof-type family protein. (Os10t0496000-02)
Sequence

CTCCATGGCTTTCCACCTTCGCTTCCTCCTCCTCCTTGCCCTCTAGCTACTAGCTCACAC
TGTCACAGTCACCACACAGCTACTAGAAGTAAGATTTAGCTAGATTATTCATTAATCTGT
ACTAATTGATATTGCTAAGCAGCTGCAGCAGCAGCAGCTGGTTGGGGGGAGGAAGAAGAA
GGAGAGTGTTCGATCGGCGGCGGCGGCGGCTCACCGGTCCGACATGCGCAGGGGTTCACC
GTGGTACGACTACTACTACTCCTCGTCGTCGTCGTCGTCGTCGTCCCCGGCGCGGAGCAA
GCGCGCGCAGGCGCAGCTCGTCGTCGTCGTCTCCGCCGCCGGCAAGAAGCTACCCTGGCC
CTCGCCGCGGCGTCGCGGGAGCCATGTCGTCGCCGTTCCTGGGCTCTTCTTCCTCTTCCG
CTTCGTCGCCCCTCTCTTACCTGACCCCGCCTAGGCCTCCTCCTCCTCCTCCTCCCCTTC
TCATGGGGCAGGGATACGCCGCTGCTGCCAATGGCGGAATTGGCGGCGGCGGCGTCGAGG
CGGTGAACGCGGCGGCGGCGCCGAGGCAGGGTGGCAGGCACGCCGGGCACCCGCCGCTGC
CGAGGCCGCCGCCGAGGCAGTGCCCGCGGTGCGGCTCGGCGAACACCAAGTTCTGCTACT
ACAACAACTACAGCCGCACGCAGCCGCGGTACCTCTGCAAGGCGTGCCGCCGCCACTGGA
CGGAGGGCGGCACGCTCCGCGACGTCCCCGTCGGCGGCGGCCGCAAGAACAGCAAGCGCG
CCGCCGGCGGAGGCAAGGCCGGCGCCACAGCCTCGACGGCGGCTTCTGCCCATGTCGTCG
CGCCGGCGGCGGCGCCGCCGACGTCGTCGTCGTTCCCCGATCTCCTGAGGCAGATGCTGA
TGGCGCCGGCTACCGCCGGTGGCGGAGGCGGCTACAGCATCGACCTGACCGCGTGGCAGC
AAATGGCGGCGTTCGCGGCTCCACCTCAGGCCGCCACCGGCGATGTCGGCGGCGCGGTCG
GAGCGGCGTCGACGGCGGCGCCGGACGCGAACTGCGGCGGCGGCGGCGTGCAGTACTGGA
ACGGGTGGCTGCAAGATGACATGCCCGGTCTAGATGGTTCATGTTAAGTAACCCGTGCTT
GTATTGATACGTATACGTATACGGAGCTACGGATATATATACCGAATACGTATACGTATA
TATATGTGTGTGTATATGCATGTATAGCCTATGTATGCATACATGCATACACATGCGCTA
TGAAAGTATATACGTATGTCGTATGCGCATACTAAATTAGCGTAACAAGAGCCTATGACT
GTACTAGTGTAGTTTGGATTCAGGTTATTAACTCGTGGGTATATGTTGACCTACTGTAGT
TAAATTTGTGTATTTGTGCGACTCT