Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0493800-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:18747265:18750250:1 gene:Os10g0493800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small nuclear RNA activating complex (SNAPc), subunit SNAP43 domain containing protein. (Os10t0493800-01)
Sequence	ATGGATCTTTCTCCTTTCAAGTTGGATATTGATGAGCTACTAGCGGATTATACCGAGGCA AATTGCACTGCATTCGCTGATTTCAAGAGATTGTGGATGGCAAAGAAATTTTCTTATATC TATGAAGGAAGACCTAAGACAAACTCTGGCGCTTTCATGCAGTCGCTCTTTTTGCATTGT ATTGGTCATATGACATCTCAGAGTTGTATGCCTCAAAGATTGGCTGGACTTTACTGCCTT TACTGTCTTTACGAATCGCAACCATACAAGCCACATTTCAAGATCTATTTGTCTCTTGAG GAGTTGAAGAAACTCAAGGATTTTGTTGTTGAGGCTAAGCAAAATGGAATGGCTGTTGTA CCGTCACTTGTCAAAAGAATGCTGGACAAAGGAATGATTTTGTTTGGATTCATCAATCTA CTTGGTGACTCAGGGGTGAAGCAGGTCAATGAGTTAACTGCATCTCAGAATAAGAGAGTG AAATTCGCATGTGACAAGTTGTTTATGAATACTCAGATAGACAGTTATATGCACATGGAT TTGGGTTCGGAGCTTGAACTTGATAAGATCAAGAAATCATCGTTGGATTATGCCAAAGCC AAGGAATTGGCATTTGCAGAGGCAAGCAATATTATCGATGTTGAAGATGCTAGGCACATT GTTCAGAATGACAAACTGCTGGGCGACAGGGTAGATGAAATCGTCAAAGAATGGGATGCA CAGAAGGAGGCCTTCTACGAGAAGACGGGAGTACGTCGCGATGAACTAGCAGTAGTTGAA CATGACGAATCAGGAGTACTCCCTCATGAAAACGATGAATTCGATGAGATTAGACAGCTG CTGCTAGAGTGA

Peptide Sequence

PEP ID	Os10t0493800-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:18747265:18750250:1 gene:Os10g0493800 transcript:Os10t0493800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small nuclear RNA activating complex (SNAPc), subunit SNAP43 domain containing protein. (Os10t0493800-01)
Sequence	MDLSPFKLDIDELLADYTEANCTAFADFKRLWMAKKFSYIYEGRPKTNSGAFMQSLFLHC IGHMTSQSCMPQRLAGLYCLYCLYESQPYKPHFKIYLSLEELKKLKDFVVEAKQNGMAVV PSLVKRMLDKGMILFGFINLLGDSGVKQVNELTASQNKRVKFACDKLFMNTQIDSYMHMD LGSELELDKIKKSSLDYAKAKELAFAEASNIIDVEDARHIVQNDKLLGDRVDEIVKEWDA QKEAFYEKTGVRRDELAVVEHDESGVLPHENDEFDEIRQLLLE

Transcript Sequence

Transcript ID	Os10t0493800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:18747265:18750250:1 gene:Os10g0493800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small nuclear RNA activating complex (SNAPc), subunit SNAP43 domain containing protein. (Os10t0493800-01)
Sequence	ATCGCTAGTGCTCGCGGAGGCCGGAGCGGAGGAGGAGACGGACGCGGCGGCGGCGCCACC GGCGACGGCCTCTCCTTCGTCTCGTTCTCCGCTCTGCTTGACGGGAGGCGGCTCCTCCGC GCGTCCCCCTCTCCGCCGCGGTGACCGGCCGAGGGGTGCTCCGCCCTCCGCTTCTCCCAA CCCCGGACGGGGCGCCGCCGAGCCAGTGCTCCCCGACGGCGGCGGCGGCGGCGAGGAACC CGTCCCCGACAGCCGAAACTCGGATCCCAACTAGGAGGAGCTGCAGAAAGCCGGCGTCTC CTACCTCCAACGGCTTCGACTTGACTGCAAAATATGGATCTTTCTCCTTTCAAGTTGGAT ATTGATGAGCTACTAGCGGATTATACCGAGGCAAATTGCACTGCATTCGCTGATTTCAAG AGATTGTGGATGGCAAAGAAATTTTCTTATATCTATGAAGGAAGACCTAAGACAAACTCT GGCGCTTTCATGCAGTCGCTCTTTTTGCATTGTATTGGTCATATGACATCTCAGAGTTGT ATGCCTCAAAGATTGGCTGGACTTTACTGCCTTTACTGTCTTTACGAATCGCAACCATAC AAGCCACATTTCAAGATCTATTTGTCTCTTGAGGAGTTGAAGAAACTCAAGGATTTTGTT GTTGAGGCTAAGCAAAATGGAATGGCTGTTGTACCGTCACTTGTCAAAAGAATGCTGGAC AAAGGAATGATTTTGTTTGGATTCATCAATCTACTTGGTGACTCAGGGGTGAAGCAGGTC AATGAGTTAACTGCATCTCAGAATAAGAGAGTGAAATTCGCATGTGACAAGTTGTTTATG AATACTCAGATAGACAGTTATATGCACATGGATTTGGGTTCGGAGCTTGAACTTGATAAG ATCAAGAAATCATCGTTGGATTATGCCAAAGCCAAGGAATTGGCATTTGCAGAGGCAAGC AATATTATCGATGTTGAAGATGCTAGGCACATTGTTCAGAATGACAAACTGCTGGGCGAC AGGGTAGATGAAATCGTCAAAGAATGGGATGCACAGAAGGAGGCCTTCTACGAGAAGACG GGAGTACGTCGCGATGAACTAGCAGTAGTTGAACATGACGAATCAGGAGTACTCCCTCAT GAAAACGATGAATTCGATGAGATTAGACAGCTGCTGCTAGAGTGAAAGTAGTGTACAACA GCATCCTCCTAAAAAAACAGATGAAATCATTCATTGGCTTACTGGAGTCTCTCAGTTTTT TTTTCCTTTTGTCACTCATATGCTCTTTTTGAGTGTTTTACTGCCCTGCTGTACGTTGCA AACAAAAACAACTTGTACATAGTAGTGATATGTTGGATGAATGTTACTATTACCATATTG CGTAGTTGTACATTGCAAGATTCATTTATAAGACATGGATTTCATAAAAATTTTGCAG