Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0491000-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:18640397:18641882:1 gene:Os10g0491000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant Basic Secretory Protein family protein. (Os10t0491000-01)
Sequence

ATGAAGCTTCACGTCGTGGCAGCCATCCTGCTGGCCGTGGCCGCGTCGTCGTCGCCGCCG
CCCGCCGCCGCCGTCACCTACGAGGTGAGCAACGAGGCGGCGAGCACCGCCGGCGGCCAG
CGGTTCGACCGGGAGTACGGCGCCGGGTACGCCAAGCAGGTGCTCGCCGCCGCCTCCTCC
TTCACCTGGAGCATCTTCAGCCAGCCGAGCGCCGCCGACCGGAGGCCCGTCGACGCCGTC
GTCCTCGCCGTCCGCGACGTCGACGGCATCGCCTCCACCAGCGGCAACACCATCACGCTC
GGCGCCGGCTACGTCGCCGGCGTCACCGGCAACGACTTCAAGACGCAGGTGACCGGAGTG
TTGTACCATGAGGTGGTGCACGTGTGGCAGTGGGGGCTGCAGGATTACGGGGCGCATTCG
TGGGTGTACGAGGGGATCGCCGACTTTGTGCGGCTGCGCGCCGGCTACCCAGCGGCTGGT
TGGGTGCAGCCGGGGCAAGGGAACAGCTGGGAGGACAGCTACTCCGTGACGGCGAGGTTC
TTCGACTACTGCGACAGCGTCAAGCCAGGGTTCGTTGCCGACCTGAACGCTAAGCTGAAG
AATGGGTACAACGTCGACTACTTCGTGCAGATCACCGGGAAGACCGTGCAGCAGCTGTGG
CAGGATTACAAGGCCAAGTATGGAAACTGA

Peptide Sequence

PEP ID

Os10t0491000-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:18640397:18641882:1 gene:Os10g0491000 transcript:Os10t0491000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant Basic Secretory Protein family protein. (Os10t0491000-01)
Sequence

MKLHVVAAILLAVAASSSPPPAAAVTYEVSNEAASTAGGQRFDREYGAGYAKQVLAAASS
FTWSIFSQPSAADRRPVDAVVLAVRDVDGIASTSGNTITLGAGYVAGVTGNDFKTQVTGV
LYHEVVHVWQWGLQDYGAHSWVYEGIADFVRLRAGYPAAGWVQPGQGNSWEDSYSVTARF
FDYCDSVKPGFVADLNAKLKNGYNVDYFVQITGKTVQQLWQDYKAKYGN

Transcript Sequence

Transcript ID

Os10t0491000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:18640397:18641882:1 gene:Os10g0491000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant Basic Secretory Protein family protein. (Os10t0491000-01)
Sequence

ACTCACCAAGACCACCAGACATGAAGCTTCACGTCGTGGCAGCCATCCTGCTGGCCGTGG
CCGCGTCGTCGTCGCCGCCGCCCGCCGCCGCCGTCACCTACGAGGTGAGCAACGAGGCGG
CGAGCACCGCCGGCGGCCAGCGGTTCGACCGGGAGTACGGCGCCGGGTACGCCAAGCAGG
TGCTCGCCGCCGCCTCCTCCTTCACCTGGAGCATCTTCAGCCAGCCGAGCGCCGCCGACC
GGAGGCCCGTCGACGCCGTCGTCCTCGCCGTCCGCGACGTCGACGGCATCGCCTCCACCA
GCGGCAACACCATCACGCTCGGCGCCGGCTACGTCGCCGGCGTCACCGGCAACGACTTCA
AGACGCAGGTGACCGGAGTGTTGTACCATGAGGTGGTGCACGTGTGGCAGTGGGGGCTGC
AGGATTACGGGGCGCATTCGTGGGTGTACGAGGGGATCGCCGACTTTGTGCGGCTGCGCG
CCGGCTACCCAGCGGCTGGTTGGGTGCAGCCGGGGCAAGGGAACAGCTGGGAGGACAGCT
ACTCCGTGACGGCGAGGTTCTTCGACTACTGCGACAGCGTCAAGCCAGGGTTCGTTGCCG
ACCTGAACGCTAAGCTGAAGAATGGGTACAACGTCGACTACTTCGTGCAGATCACCGGGA
AGACCGTGCAGCAGCTGTGGCAGGATTACAAGGCCAAGTATGGAAACTGATGATCGATCG
ACGCAGAGAATGAATAAGACAAGAGATTACCATCATTGATTGATATAGATTGTTGTAACT
CATAGCTATGGAGTTTACACAATTATTGTATTGCTTACGGATGATAGAATAAAGGGACGC
TGTCTAGTTTTCAATC