Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0490800-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:18635437:18636123:-1 gene:Os10g0490800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Secretory protein. (Os10t0490800-00)
Sequence

ATGGCCACTCTCGCGGCGCTCATGGCCGCCGCGGCCGCGGCCGCGACGGCCGCTGGCGCC
GTGACGTTCGATGCGACGAACACGGCGTCGAGCACCGCCGGCGGGCAGCGGTTCGACCGG
GAGGTCGGCGTGGACTACGCGAAGCAGGTGCTCGCCGACGCGTCGTCCTTCATCTGGGAC
GCCTTCGAGCAGCCCGGCGACGGCGGCGACCGGAAGCCGGTGGACGCGGTGACCCTGACC
GTGGAGGACATCGACGGCGTGGCGTTCACCAGCGGCGACGGCATCCACCTGAGCGCGCGG
TACGTCGGCGGCTACAGCTCCAGCTCCGGCGACGTGAGGACGGAGGTGACCGGCGTGCTG
TACCACGAGGCGACGCACGTGTGGCAGTGGGGGCTGCAGGACTACGCGGCGCACTCGTGG
GTGTACGAGGGGATCGCCGACTTCGTGCGGCTGCGCGCCGGCTACGTCGCCGCCGGCTGG
GTGCAGCCGGGGCAAGGGAACAGCTGGGAGGACAGCTACTCCGTGACGGCGAGGTTCTTC
GACTACTGCGACAGCGTCAAGCCAGGGTTCGTCGCCGACATCAATGCCAAGTTGAAGGAC
GGGTACAATGTCGACTACTTCGTGCAGATCACCGGGAAGACCGTGCAGCAGCTGTGGCAG
GATTACAAGGCCAAGTACGGCAACTGA

Peptide Sequence

PEP ID

Os10t0490800-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:18635437:18636123:-1 gene:Os10g0490800 transcript:Os10t0490800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Secretory protein. (Os10t0490800-00)
Sequence

MATLAALMAAAAAAATAAGAVTFDATNTASSTAGGQRFDREVGVDYAKQVLADASSFIWD
AFEQPGDGGDRKPVDAVTLTVEDIDGVAFTSGDGIHLSARYVGGYSSSSGDVRTEVTGVL
YHEATHVWQWGLQDYAAHSWVYEGIADFVRLRAGYVAAGWVQPGQGNSWEDSYSVTARFF
DYCDSVKPGFVADINAKLKDGYNVDYFVQITGKTVQQLWQDYKAKYGN

Transcript Sequence

Transcript ID

Os10t0490800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:18635437:18636123:-1 gene:Os10g0490800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Secretory protein. (Os10t0490800-00)
Sequence

ATGGCCACTCTCGCGGCGCTCATGGCCGCCGCGGCCGCGGCCGCGACGGCCGCTGGCGCC
GTGACGTTCGATGCGACGAACACGGCGTCGAGCACCGCCGGCGGGCAGCGGTTCGACCGG
GAGGTCGGCGTGGACTACGCGAAGCAGGTGCTCGCCGACGCGTCGTCCTTCATCTGGGAC
GCCTTCGAGCAGCCCGGCGACGGCGGCGACCGGAAGCCGGTGGACGCGGTGACCCTGACC
GTGGAGGACATCGACGGCGTGGCGTTCACCAGCGGCGACGGCATCCACCTGAGCGCGCGG
TACGTCGGCGGCTACAGCTCCAGCTCCGGCGACGTGAGGACGGAGGTGACCGGCGTGCTG
TACCACGAGGCGACGCACGTGTGGCAGTGGGGGCTGCAGGACTACGCGGCGCACTCGTGG
GTGTACGAGGGGATCGCCGACTTCGTGCGGCTGCGCGCCGGCTACGTCGCCGCCGGCTGG
GTGCAGCCGGGGCAAGGGAACAGCTGGGAGGACAGCTACTCCGTGACGGCGAGGTTCTTC
GACTACTGCGACAGCGTCAAGCCAGGGTTCGTCGCCGACATCAATGCCAAGTTGAAGGAC
GGGTACAATGTCGACTACTTCGTGCAGATCACCGGGAAGACCGTGCAGCAGCTGTGGCAG
GATTACAAGGCCAAGTACGGCAACTGA