Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0490666-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:18631316:18631966:-1 gene:Os10g0490666 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Barwin-related endoglucanase. (Os10t0490666-00)
Sequence

ATGGCGGCTAACGTGAAGGTATTGGTCGTGCTCGCTCTCTTGCAGCTGATGTCCCTTCAC
GCCGTCGTCCATGGCGGCGACAATGGCGGCGTCTCCGCCGTGGCCACCGGCAAGCACGAG
CCGAAGCCGAAGCAAGGCGGCGGCGGCGGCGGCGGCGACGGCGGCTGCCACATCAGCGGC
TTCCTGCACGGAAAGGCCGGCAAGTGCAACAGGGCGCACGGCTCCGACTGCTGCGTCACC
GGCCGCCGGTACCCGCAGTTCAGGTGCTCGCCGCCGGTGTCCTCGGCTAGGCCAACGCCG
GCGACGCTGACGCTGAACAGCTTCGCCCGCGGCGGCGACGGCGGCGGGAGGTCGTCCTGC
GACGGCCGGTTCCACCCGGACACCGCCATGGTGGTGGCGCTCTCCAGCGGCTGGCTCCGG
CTCGACGGCGCCAGCCGGTGCAACCGCATGATCCGCGTCGCCGCCGGCAACGGCCGGTCC
GCGCTGGCCAGGGTCGTCGACGAGTGCGACTCGGTGAACGGCTGCGACGCCGAGCACAAC
TTCGAGCCGCCGTGCCCGAACGACGTCGTCGACGGCTCGCCGGCGGTGTGGAAGGCGCTC
GGCCTCGACGAGGGCGTCGGCGAGTTCAAGGTCACCTGGTCTGATGTCTGA

Peptide Sequence

PEP ID

Os10t0490666-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:18631316:18631966:-1 gene:Os10g0490666 transcript:Os10t0490666-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Barwin-related endoglucanase. (Os10t0490666-00)
Sequence

MAANVKVLVVLALLQLMSLHAVVHGGDNGGVSAVATGKHEPKPKQGGGGGGGDGGCHISG
FLHGKAGKCNRAHGSDCCVTGRRYPQFRCSPPVSSARPTPATLTLNSFARGGDGGGRSSC
DGRFHPDTAMVVALSSGWLRLDGASRCNRMIRVAAGNGRSALARVVDECDSVNGCDAEHN
FEPPCPNDVVDGSPAVWKALGLDEGVGEFKVTWSDV

Transcript Sequence

Transcript ID

Os10t0490666-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:18631316:18631966:-1 gene:Os10g0490666 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Barwin-related endoglucanase. (Os10t0490666-00)
Sequence

ATGGCGGCTAACGTGAAGGTATTGGTCGTGCTCGCTCTCTTGCAGCTGATGTCCCTTCAC
GCCGTCGTCCATGGCGGCGACAATGGCGGCGTCTCCGCCGTGGCCACCGGCAAGCACGAG
CCGAAGCCGAAGCAAGGCGGCGGCGGCGGCGGCGGCGACGGCGGCTGCCACATCAGCGGC
TTCCTGCACGGAAAGGCCGGCAAGTGCAACAGGGCGCACGGCTCCGACTGCTGCGTCACC
GGCCGCCGGTACCCGCAGTTCAGGTGCTCGCCGCCGGTGTCCTCGGCTAGGCCAACGCCG
GCGACGCTGACGCTGAACAGCTTCGCCCGCGGCGGCGACGGCGGCGGGAGGTCGTCCTGC
GACGGCCGGTTCCACCCGGACACCGCCATGGTGGTGGCGCTCTCCAGCGGCTGGCTCCGG
CTCGACGGCGCCAGCCGGTGCAACCGCATGATCCGCGTCGCCGCCGGCAACGGCCGGTCC
GCGCTGGCCAGGGTCGTCGACGAGTGCGACTCGGTGAACGGCTGCGACGCCGAGCACAAC
TTCGAGCCGCCGTGCCCGAACGACGTCGTCGACGGCTCGCCGGCGGTGTGGAAGGCGCTC
GGCCTCGACGAGGGCGTCGGCGAGTTCAAGGTCACCTGGTCTGATGTCTGA