Plant GARDEN How To ▶︎

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Oryza sativa

CDS Sequence

CDS ID

Os10t0488300-01

CDS Infomation

cds chromosome:IRGSP-1.0:10:18486477:18496730:1 gene:Os10g0488300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vps52/Sac2 family protein. (Os10t0488300-01)

Sequence

ATGGTGGTCGTCCATGGACAGCGGGCTGAAGACTCGTTTGGTGGGTTTTTCTCCTTCGAT
GAGGACGCTGCCAGTGAGGATATGTCATTGGATGGTTTGGATGAGGAACTTGAAGAGCAC
AAGGATTATGATGTATTGATAAGTATTCTAGCGAATGGTGAAAAACAGAGAGATATGGCA
ACCTTGGTTGAAGGCAACCTAGGCCATGCTGAACAGGATCTGATTCAAGATTATGTTGAA
GATAGTGACAACCTGGTATTATTGCATGATCAGATTCATGACTGTGACATTATTTTGTCA
CAGATAGGATCACTTCTTACTGGATTCCAGGTTCACATTGGTTCCATTAACTCAGAACTA
AGAAGTCTCCAGGAGAGATCCTTGGATATAAGTGTCAGACTGAAGAACCGCAAGTTGGTT
GAGACAAAGCTTGCAAAATTTGTCGAAGAGATTGTTGCTCCTCCTAGTTTGGTGACTGTT
ATTATCGATGGAGAGATAAATGATGGTTATGCTAAAAGTTTGGAAATTTTGAGCAAAAAG
TTGAGATTTTCTCAAGTTGATCCTATGATTAATGCATCAAATTCTCTGAAGGATATTAAA
CCAGAACTGGAAAGGCTTCTACAAAAGGCATTATGCAAGGTGTCCGACTATCTCACTGAA
TTATTCTTTTCCATGAGAAAGCCTGGAACTAATATCCAGATACTGCAACAAAATATGGTT
CAAAAATATAGGTATCTCATCCTCTTTCTTAGAGAGCATGGATCCAAGGTCTACACTGAT
GTTCGTGCAACATATGCTGATACAATGAACAAGGTGCTGAGTGCACATTTTCAAGTGTAC
ATAGAAGCATTGGAGAAGCTCAAGCTTGACATTGGCGTATCAAGTGATTTGACTGGATAT
GACACTAATATCATTGACCTTATATCAAGGGGAAGAGAGCATTTAAGAAATCACCGTTTC
ATGTTTTCTTTAGGTGAACGGGCAAGCATTTTGAAGGAGATTGATCGACCTGGCTTGGTT
CCTCATATATCTGAAGTCAATCCTGTAAAATACCCATATGAAGTTATTTTTAGGAGTATA
CAGAAGCTTCTGATGGACACTGCTAGCTCTGAGTATCTTTTTATCAAGGCATTCTTTGGT
GAAGAATCATTGTTTTATCAGGTTTTTCAAGGACCTTTTAAAGTTATTAATGGACATTTG
GATCATACTCTTCGAAATTATCATGACGCGGTATGCCTAATGCTCATGATCTGCATAACT
AGGAAACACCAGTTGGTTATGTTGAACAGGCGACTTCCTTGTCTAGACGCATATTTGGAT
AAGGTTCTCATCTATCTCTGGCCACGCTTCAAGACTGTTTTTGACATGTATCTTCAAAGC
TTGTACCGGTGTGATACAAAATTGTTATGGGTAGATGGCTCCCATCCACACCATATTGTA
AGGTGCTATGTTGAGTTCACAGCATCCCTTATTCAACTTAATGCTGAATGCGGAGATGGT
CAGCTTGATATGAACTTGGAACGCTTACGGCTAGCTGTTGATAATCTACTTGGTAGACTT
GCTGAAAATTTTGCAAACCCCAAGACGCAACACTTGTTTCTTCTGAATAATTATGACATG
ACCATTTCTGTTCTGAAGGAAGCCGGTGATGAAGCAAATAAACTGCAAAGCTATTTTGAA
GAGAAGCTAGAAAGTAACATGATATCATTTGCGGATGAATTGCTTATGGAGCATTTCAAG
GATTTGATAAAATTTGTGAGAAGCCGTGTCTCTGAAGACCTTATTCTTTATACTGAATGC
CCAAGCATTGCCGATGTTGAGCCAATTGTGAAGAACTTCGCCGTGACATGGAAAACTGCT
CTAGAGCTCATGCACAATGAAGTTGTAACTTCTTGCAGTAACCTTTTAGCTGGGATGGAG
ATTCTAAAAGCAGCAATGGTTCAGCTACTCAATGACTACAACAGACTCTCAGAATGTGTG
AAGATAATCCCAGGAGGATCAACTCTGAACAGGAATCTGGTTTCTATTACATCCATTTCA
TATGAGATGAGGAAATATTCAATAACACTCTAG

Peptide Sequence

PEP ID

Os10t0488300-01

PEP Infomation

pep chromosome:IRGSP-1.0:10:18486477:18496730:1 gene:Os10g0488300 transcript:Os10t0488300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vps52/Sac2 family protein. (Os10t0488300-01)

Sequence

MVVVHGQRAEDSFGGFFSFDEDAASEDMSLDGLDEELEEHKDYDVLISILANGEKQRDMA
TLVEGNLGHAEQDLIQDYVEDSDNLVLLHDQIHDCDIILSQIGSLLTGFQVHIGSINSEL
RSLQERSLDISVRLKNRKLVETKLAKFVEEIVAPPSLVTVIIDGEINDGYAKSLEILSKK
LRFSQVDPMINASNSLKDIKPELERLLQKALCKVSDYLTELFFSMRKPGTNIQILQQNMV
QKYRYLILFLREHGSKVYTDVRATYADTMNKVLSAHFQVYIEALEKLKLDIGVSSDLTGY
DTNIIDLISRGREHLRNHRFMFSLGERASILKEIDRPGLVPHISEVNPVKYPYEVIFRSI
QKLLMDTASSEYLFIKAFFGEESLFYQVFQGPFKVINGHLDHTLRNYHDAVCLMLMICIT
RKHQLVMLNRRLPCLDAYLDKVLIYLWPRFKTVFDMYLQSLYRCDTKLLWVDGSHPHHIV
RCYVEFTASLIQLNAECGDGQLDMNLERLRLAVDNLLGRLAENFANPKTQHLFLLNNYDM
TISVLKEAGDEANKLQSYFEEKLESNMISFADELLMEHFKDLIKFVRSRVSEDLILYTEC
PSIADVEPIVKNFAVTWKTALELMHNEVVTSCSNLLAGMEILKAAMVQLLNDYNRLSECV
KIIPGGSTLNRNLVSITSISYEMRKYSITL

Transcript Sequence

Transcript ID

Os10t0488300-01

Transcript Infomation

cdna chromosome:IRGSP-1.0:10:18486477:18496730:1 gene:Os10g0488300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vps52/Sac2 family protein. (Os10t0488300-01)

Sequence

GTCTCCTTCTCGGACAAGCCTCCTCCACTCCCGGCCTCCCGATCGATCGCGACTAGTTCC
AAGCAGAGATCATCAGCAGCAGGTGGGGGCCGACCGCCTTAGCTCCCCCTCCCCGCCGCC
TGGTTCTCATCTGGCGTGCAACTTGTAGCAGCGGCATGGTGGTCGTCCATGGACAGCGGG
CTGAAGACTCGTTTGGTGGGTTTTTCTCCTTCGATGAGGACGCTGCCAGTGAGGATATGT
CATTGGATGGTTTGGATGAGGAACTTGAAGAGCACAAGGATTATGATGTATTGATAAGTA
TTCTAGCGAATGGTGAAAAACAGAGAGATATGGCAACCTTGGTTGAAGGCAACCTAGGCC
ATGCTGAACAGGATCTGATTCAAGATTATGTTGAAGATAGTGACAACCTGGTATTATTGC
ATGATCAGATTCATGACTGTGACATTATTTTGTCACAGATAGGATCACTTCTTACTGGAT
TCCAGGTTCACATTGGTTCCATTAACTCAGAACTAAGAAGTCTCCAGGAGAGATCCTTGG
ATATAAGTGTCAGACTGAAGAACCGCAAGTTGGTTGAGACAAAGCTTGCAAAATTTGTCG
AAGAGATTGTTGCTCCTCCTAGTTTGGTGACTGTTATTATCGATGGAGAGATAAATGATG
GTTATGCTAAAAGTTTGGAAATTTTGAGCAAAAAGTTGAGATTTTCTCAAGTTGATCCTA
TGATTAATGCATCAAATTCTCTGAAGGATATTAAACCAGAACTGGAAAGGCTTCTACAAA
AGGCATTATGCAAGGTGTCCGACTATCTCACTGAATTATTCTTTTCCATGAGAAAGCCTG
GAACTAATATCCAGATACTGCAACAAAATATGGTTCAAAAATATAGGTATCTCATCCTCT
TTCTTAGAGAGCATGGATCCAAGGTCTACACTGATGTTCGTGCAACATATGCTGATACAA
TGAACAAGGTGCTGAGTGCACATTTTCAAGTGTACATAGAAGCATTGGAGAAGCTCAAGC
TTGACATTGGCGTATCAAGTGATTTGACTGGATATGACACTAATATCATTGACCTTATAT
CAAGGGGAAGAGAGCATTTAAGAAATCACCGTTTCATGTTTTCTTTAGGTGAACGGGCAA
GCATTTTGAAGGAGATTGATCGACCTGGCTTGGTTCCTCATATATCTGAAGTCAATCCTG
TAAAATACCCATATGAAGTTATTTTTAGGAGTATACAGAAGCTTCTGATGGACACTGCTA
GCTCTGAGTATCTTTTTATCAAGGCATTCTTTGGTGAAGAATCATTGTTTTATCAGGTTT
TTCAAGGACCTTTTAAAGTTATTAATGGACATTTGGATCATACTCTTCGAAATTATCATG
ACGCGGTATGCCTAATGCTCATGATCTGCATAACTAGGAAACACCAGTTGGTTATGTTGA
ACAGGCGACTTCCTTGTCTAGACGCATATTTGGATAAGGTTCTCATCTATCTCTGGCCAC
GCTTCAAGACTGTTTTTGACATGTATCTTCAAAGCTTGTACCGGTGTGATACAAAATTGT
TATGGGTAGATGGCTCCCATCCACACCATATTGTAAGGTGCTATGTTGAGTTCACAGCAT
CCCTTATTCAACTTAATGCTGAATGCGGAGATGGTCAGCTTGATATGAACTTGGAACGCT
TACGGCTAGCTGTTGATAATCTACTTGGTAGACTTGCTGAAAATTTTGCAAACCCCAAGA
CGCAACACTTGTTTCTTCTGAATAATTATGACATGACCATTTCTGTTCTGAAGGAAGCCG
GTGATGAAGCAAATAAACTGCAAAGCTATTTTGAAGAGAAGCTAGAAAGTAACATGATAT
CATTTGCGGATGAATTGCTTATGGAGCATTTCAAGGATTTGATAAAATTTGTGAGAAGCC
GTGTCTCTGAAGACCTTATTCTTTATACTGAATGCCCAAGCATTGCCGATGTTGAGCCAA
TTGTGAAGAACTTCGCCGTGACATGGAAAACTGCTCTAGAGCTCATGCACAATGAAGTTG
TAACTTCTTGCAGTAACCTTTTAGCTGGGATGGAGATTCTAAAAGCAGCAATGGTTCAGC
TACTCAATGACTACAACAGACTCTCAGAATGTGTGAAGATAATCCCAGGAGGATCAACTC
TGAACAGGAATCTGGTTTCTATTACATCCATTTCATATGAGATGAGGAAATATTCAATAA
CACTCTAGTAATTGTTATGATGTCCAAGCAATTTTTGGAACAGATGAAAAACAAACAGCG
CTGATAGTTTCGATCCCTATCTTCACAAGCAAGAGAAAAGCGCAACACAAAATTATATAA
TTTTGAACATTCTGTGCTTTGTTTTATGGATTGTACCTTCACGGCTTCACTGAAATTTTC
TGATCAAATAATACTTGACAACAATGATCTGCTTGCAGTTT