Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0484800-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:18316329:18318605:1 gene:Os10g0484800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:polyketide synthase 1, polyketide synthase 21 description:Polyketide synthase, type III domain containing protein. (Os10t0484800-01)
Sequence	ATGGCTGACCTTGGATTCGGCGATGCCAGGAGTGGCAATGGCAGCAGGAGCCAATGCTCC AGGGGGAAGGCGATGCTGCTCGCCCTCGGCAAGGGCCTCCCTGAGCAAGTTCTTCCCCAG GAGAAGGTCGTCGAGACCTACCTCCAGGACACCATCTGCGACGATCCTGCAACAAGGGCA AAGCTGGAAAGACTTTGCAAGACCACCACAGTGAGGACAAGGTACACTGTCATGTCAAAG GAGCTCCTAGACGAGCACCCAGAGCTCAGGACTGAGGGAACTCCAACACTGACGCCACGG CTTGACATCTGCAATGCTGCAGTGCTTGAGCTTGGTGCTACTGCAGCCCGTGCCGCCCTT GGTGAATGGGGGCGTCCAGCAGCTGACATCACCCACCTTGTCTACATCTCGTCCAGTGAG CTTCGCCTCCCAGGGGGTGACCTTTTCCTGGCAACTCGCCTTGGCCTCCATCCAAACACC GTCCGCACTTCCCTTCTCTTCCTTGGCTGCTCCGGTGGCGCTGCCGCGCTCCGCACCGCC AAGGACATTGCTGAGAACAACCCAGGGAGCCGCGTCCTTGTAGTAGCCGCGGAGACGACG GTGCTGGGATTCCGGCCACCAAGTCCTGACCGTCCTTACGATCTTGTTGGTGCTGCCCTG TTTGGTGACGGCGCATCAGCTGCGATCATTGGAGCAGGCCCCATTGCTGCTGAGGAGAGT CCCTTCCTAGAGCTTCAGTTCTCAACACAGGAGTTCCTACCAGGGACGGACAAGGTAATT GATGGCAAGATCACTGAGGAAGGGATTAATTTCAAACTGGGGCGTGATTTGCCCGAAAAG ATTGAAAACCGTATAGAAGGGTTCTGCAGGACACTCATGGATCGGGTTGGGATAAAGGAG TTCAATGATGTATTCTGGGCTGTGCATCCTGGTGGTCCAGCAATACTGAACAGGCTAGAG GTTTGCCTTGAACTCCAGCCAGAGAAGCTCAAGATCAGTAGAAAGGCCCTGATGAACTAT GGTAATGTGAGCAGCAACACCGTCTTCTATGTGTTGGAGTATTTGAGGGATGAGTTGAAG AAAGGGATGATAAGGGAAGAATGGGGACTGATCTTGGCTTTTGGCCCAGGCATCACATTT GAAGGAATGCTAGTTCGAGGCATTAACTGA

Peptide Sequence

PEP ID	Os10t0484800-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:18316329:18318605:1 gene:Os10g0484800 transcript:Os10t0484800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:polyketide synthase 1, polyketide synthase 21 description:Polyketide synthase, type III domain containing protein. (Os10t0484800-01)
Sequence	MADLGFGDARSGNGSRSQCSRGKAMLLALGKGLPEQVLPQEKVVETYLQDTICDDPATRA KLERLCKTTTVRTRYTVMSKELLDEHPELRTEGTPTLTPRLDICNAAVLELGATAARAAL GEWGRPAADITHLVYISSSELRLPGGDLFLATRLGLHPNTVRTSLLFLGCSGGAAALRTA KDIAENNPGSRVLVVAAETTVLGFRPPSPDRPYDLVGAALFGDGASAAIIGAGPIAAEES PFLELQFSTQEFLPGTDKVIDGKITEEGINFKLGRDLPEKIENRIEGFCRTLMDRVGIKE FNDVFWAVHPGGPAILNRLEVCLELQPEKLKISRKALMNYGNVSSNTVFYVLEYLRDELK KGMIREEWGLILAFGPGITFEGMLVRGIN

Transcript Sequence

Transcript ID	Os10t0484800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:18316329:18318605:1 gene:Os10g0484800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:polyketide synthase 1, polyketide synthase 21 description:Polyketide synthase, type III domain containing protein. (Os10t0484800-01)
Sequence	ACTGTCACACAGCGAAATCACAGGACTAGAATACTTGCTGACTACTGAGGCGAAAGGATA CCGGGTGGCGAAGATGGCTGACCTTGGATTCGGCGATGCCAGGAGTGGCAATGGCAGCAG GAGCCAATGCTCCAGGGGGAAGGCGATGCTGCTCGCCCTCGGCAAGGGCCTCCCTGAGCA AGTTCTTCCCCAGGAGAAGGTCGTCGAGACCTACCTCCAGGACACCATCTGCGACGATCC TGCAACAAGGGCAAAGCTGGAAAGACTTTGCAAGACCACCACAGTGAGGACAAGGTACAC TGTCATGTCAAAGGAGCTCCTAGACGAGCACCCAGAGCTCAGGACTGAGGGAACTCCAAC ACTGACGCCACGGCTTGACATCTGCAATGCTGCAGTGCTTGAGCTTGGTGCTACTGCAGC CCGTGCCGCCCTTGGTGAATGGGGGCGTCCAGCAGCTGACATCACCCACCTTGTCTACAT CTCGTCCAGTGAGCTTCGCCTCCCAGGGGGTGACCTTTTCCTGGCAACTCGCCTTGGCCT CCATCCAAACACCGTCCGCACTTCCCTTCTCTTCCTTGGCTGCTCCGGTGGCGCTGCCGC GCTCCGCACCGCCAAGGACATTGCTGAGAACAACCCAGGGAGCCGCGTCCTTGTAGTAGC CGCGGAGACGACGGTGCTGGGATTCCGGCCACCAAGTCCTGACCGTCCTTACGATCTTGT TGGTGCTGCCCTGTTTGGTGACGGCGCATCAGCTGCGATCATTGGAGCAGGCCCCATTGC TGCTGAGGAGAGTCCCTTCCTAGAGCTTCAGTTCTCAACACAGGAGTTCCTACCAGGGAC GGACAAGGTAATTGATGGCAAGATCACTGAGGAAGGGATTAATTTCAAACTGGGGCGTGA TTTGCCCGAAAAGATTGAAAACCGTATAGAAGGGTTCTGCAGGACACTCATGGATCGGGT TGGGATAAAGGAGTTCAATGATGTATTCTGGGCTGTGCATCCTGGTGGTCCAGCAATACT GAACAGGCTAGAGGTTTGCCTTGAACTCCAGCCAGAGAAGCTCAAGATCAGTAGAAAGGC CCTGATGAACTATGGTAATGTGAGCAGCAACACCGTCTTCTATGTGTTGGAGTATTTGAG GGATGAGTTGAAGAAAGGGATGATAAGGGAAGAATGGGGACTGATCTTGGCTTTTGGCCC AGGCATCACATTTGAAGGAATGCTAGTTCGAGGCATTAACTGAGACTGAAAGGGGTCCAA GAAGACTTTCAGCTAGATGGAAGAATCACAAACATACCATTTCCAGGTTAAGTATATAGT ATGAACTTGAAACATCTCATAAGGAGCATAGATGTCTTGACAGCATCTGTGCACTACATA GTTATTGTTTTACTGTAATCTATGTTTTATGTATCAAACAATGTGAGGTACTCTAGTTTG AATGCAAGATACTTG