Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0483500-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:18270328:18274523:1 gene:Os10g0483500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYTOKININ OXIDASE/DEHYDROGENASE 3 description:FAD linked oxidase, N-terminal domain containing protein. (Os10t0483500-01)
Sequence	ATGGAGGTTGCCATGGTCTGCACAAGAGTTAACCTGCTCATCCTCATCCTTTCTCTCTGC TCCCCATACAAGTTTATACAGAGCCCCATGGACTTTGGCCCTTTGAACCTCCTTCCCACC ACCACCACTGCATCCAGTGACTTTGGTAGAATCCTCTTCCACTCCCCATCTGCAGTTCTA AAGCCCCAAGCTCCAAGGGATATATCCCTGCTTCTCAGCTTCCTCTCTGCCTCACCTCTT GGCAAGGTGACGGTGGCAGCCAGGGGAGCAGGTCACTCCATCCATGGACAGGCACAGGCC CTTGATGGCATTGTAGTGGAGATGAGCTCCTTGCCTTCTGAGATTGAATTCTACAGAAGA GGAGAAGGAGATGTTTCTTATGCTGATGTGGGTGGTGGAATCATGTGGATTGAGCTTCTG GAGCAGAGCTTGAAGCTTGGGCTGGCTCCAAGGTCTTGGACTGATTACCTCTATCTCACC ATTGGTGGAACCTTGTCCAATGCTGGCATCAGTGGGCAGACATTCAAGCATGGACCTCAG ATTAGCAATGTTCTACAGCTGGAAGTAGTCACAGGCAGGGGTGAGATTGTGACCTGTTCA CCCACCAAGGATGCAGAGCTATTCAATGCTGTTCTTGGAGGCCTTGGGCAGTTCGGCATC ATTACTAGGGCAAGGATCCTGCTGCAGGAAGCTCCACAGAAAGTGAAGTGGGTTAGAGCC TTCTATGATGATTTCGCCACCTTCACCAAAGACCAGGAGTTGCTGGTGTCAATGCCGGTT TTGGTGGACTATGTGGAAGGTTTCATCGTGTTGAATGAGCAATCCCTTCACAGCTCCTCC ATTGCCTTCCCTACAAATGTTGACTTCAACCCAGATTTTGGCACCAAGAACAACCCTAAG ATCTACTACTGCATAGAGTTTGCTGTCCACGATTACCAGAACAAGAACATCAATGTGGAA CAGGTCGTGGAAGTCATCTCAAGGCAGATGAGCCACATAGCATCCCACTTGTATAGCGTG GAGGTGTCCTACTTTGATTTTCTCAACAGGGTTAGGATGGAGGAGATGAGCCTTAGGAAC AGTGGGCTCTGGGAGGTGCACCATCCATGGTTGAACATGTTCGTGCCAAGCGCTGGGATT AGTGACTTCAGGGACCTGCTCATGGACAGCATCTCACCGGATAACTTCGAGGGCCTCATC CTCATCTACCCACTCCTCAGACACAAGTGGGACACCAACACGTCGGTCGTGTTACCGGAC TCCGGGTCGACGGACCAGGTGATGTACGCGGTGGGCATCCTCCGGTCGGCGAACCCCGAC GACGGGTGCTCCCACCACTGCCTCCAGGAGCTCCTCCTCCGCCACCGCCGCCTCGCCGGC GCCGCCGCGTCGGGCCTCGGCGCGAAGCAGTACCTCGCCCACCACCCGACCCCGGCCGGC TGGCGCCGCCACTTCGGCCGGCGGTGGGAGCGGTTCGCCGATCGCAAGGCCCGGTTCGAC CCGAGGTGCATCCTCGGGCCAGGCCAGGGTATATTCCCCAGGGACAGCAGCAGCAGCAAT GGCGCATTTGCAAGCTATAGCTGA

Peptide Sequence

PEP ID	Os10t0483500-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:18270328:18274523:1 gene:Os10g0483500 transcript:Os10t0483500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYTOKININ OXIDASE/DEHYDROGENASE 3 description:FAD linked oxidase, N-terminal domain containing protein. (Os10t0483500-01)
Sequence	MEVAMVCTRVNLLILILSLCSPYKFIQSPMDFGPLNLLPTTTTASSDFGRILFHSPSAVL KPQAPRDISLLLSFLSASPLGKVTVAARGAGHSIHGQAQALDGIVVEMSSLPSEIEFYRR GEGDVSYADVGGGIMWIELLEQSLKLGLAPRSWTDYLYLTIGGTLSNAGISGQTFKHGPQ ISNVLQLEVVTGRGEIVTCSPTKDAELFNAVLGGLGQFGIITRARILLQEAPQKVKWVRA FYDDFATFTKDQELLVSMPVLVDYVEGFIVLNEQSLHSSSIAFPTNVDFNPDFGTKNNPK IYYCIEFAVHDYQNKNINVEQVVEVISRQMSHIASHLYSVEVSYFDFLNRVRMEEMSLRN SGLWEVHHPWLNMFVPSAGISDFRDLLMDSISPDNFEGLILIYPLLRHKWDTNTSVVLPD SGSTDQVMYAVGILRSANPDDGCSHHCLQELLLRHRRLAGAAASGLGAKQYLAHHPTPAG WRRHFGRRWERFADRKARFDPRCILGPGQGIFPRDSSSSNGAFASYS

Transcript Sequence

Transcript ID	Os10t0483500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:18270328:18274523:1 gene:Os10g0483500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYTOKININ OXIDASE/DEHYDROGENASE 3 description:FAD linked oxidase, N-terminal domain containing protein. (Os10t0483500-01)
Sequence	AAAACCTCATAGCCTCATCAGCTGATCACTGAGTGCCTTCTCCTTCTCCTCCTCCTTTAA GAACCCTCTTCCCTGCCCATCCTTTTCTTCATCCCCTCAACTTTGCCTAAAAGGCAAGAA CAAAGCCATATGATTCTCTGATCCCTTCTTCCAAGCTGCATCCCAACACAACACATTGTG GTGACACAGCAAACATAATATACACACATCCTCTTCTTCTTCTACCACCCTCCATATTCC TGCAAGAAACAACTGGAGGAAGAATCACTACTCCAACACCATGGAGGTTGCCATGGTCTG CACAAGAGTTAACCTGCTCATCCTCATCCTTTCTCTCTGCTCCCCATACAAGTTTATACA GAGCCCCATGGACTTTGGCCCTTTGAACCTCCTTCCCACCACCACCACTGCATCCAGTGA CTTTGGTAGAATCCTCTTCCACTCCCCATCTGCAGTTCTAAAGCCCCAAGCTCCAAGGGA TATATCCCTGCTTCTCAGCTTCCTCTCTGCCTCACCTCTTGGCAAGGTGACGGTGGCAGC CAGGGGAGCAGGTCACTCCATCCATGGACAGGCACAGGCCCTTGATGGCATTGTAGTGGA GATGAGCTCCTTGCCTTCTGAGATTGAATTCTACAGAAGAGGAGAAGGAGATGTTTCTTA TGCTGATGTGGGTGGTGGAATCATGTGGATTGAGCTTCTGGAGCAGAGCTTGAAGCTTGG GCTGGCTCCAAGGTCTTGGACTGATTACCTCTATCTCACCATTGGTGGAACCTTGTCCAA TGCTGGCATCAGTGGGCAGACATTCAAGCATGGACCTCAGATTAGCAATGTTCTACAGCT GGAAGTAGTCACAGGCAGGGGTGAGATTGTGACCTGTTCACCCACCAAGGATGCAGAGCT ATTCAATGCTGTTCTTGGAGGCCTTGGGCAGTTCGGCATCATTACTAGGGCAAGGATCCT GCTGCAGGAAGCTCCACAGAAAGTGAAGTGGGTTAGAGCCTTCTATGATGATTTCGCCAC CTTCACCAAAGACCAGGAGTTGCTGGTGTCAATGCCGGTTTTGGTGGACTATGTGGAAGG TTTCATCGTGTTGAATGAGCAATCCCTTCACAGCTCCTCCATTGCCTTCCCTACAAATGT TGACTTCAACCCAGATTTTGGCACCAAGAACAACCCTAAGATCTACTACTGCATAGAGTT TGCTGTCCACGATTACCAGAACAAGAACATCAATGTGGAACAGGTCGTGGAAGTCATCTC AAGGCAGATGAGCCACATAGCATCCCACTTGTATAGCGTGGAGGTGTCCTACTTTGATTT TCTCAACAGGGTTAGGATGGAGGAGATGAGCCTTAGGAACAGTGGGCTCTGGGAGGTGCA CCATCCATGGTTGAACATGTTCGTGCCAAGCGCTGGGATTAGTGACTTCAGGGACCTGCT CATGGACAGCATCTCACCGGATAACTTCGAGGGCCTCATCCTCATCTACCCACTCCTCAG ACACAAGTGGGACACCAACACGTCGGTCGTGTTACCGGACTCCGGGTCGACGGACCAGGT GATGTACGCGGTGGGCATCCTCCGGTCGGCGAACCCCGACGACGGGTGCTCCCACCACTG CCTCCAGGAGCTCCTCCTCCGCCACCGCCGCCTCGCCGGCGCCGCCGCGTCGGGCCTCGG CGCGAAGCAGTACCTCGCCCACCACCCGACCCCGGCCGGCTGGCGCCGCCACTTCGGCCG GCGGTGGGAGCGGTTCGCCGATCGCAAGGCCCGGTTCGACCCGAGGTGCATCCTCGGGCC AGGCCAGGGTATATTCCCCAGGGACAGCAGCAGCAGCAATGGCGCATTTGCAAGCTATAG CTGACACGAGAAAGTGCAGTGTAGTGCTGTGCTGTGCCGTGCCGTGCCGTGCCGTGACAG CTGGTGGTACAATAAGAGGGGGACATAGGATAGGCAGGCGAGGCTAGGAGGGAGATCTTG TTCTTTCTTTTCGATAGCTTTCTTTTCTGCTTCGATTTGAGGCCGGCATCGTTTTGGTTG GTTGATGTGGTTGGGCGGGGGTTGATTTTGAACGGATCCTCGGTGGTGGTGATCACCATC ATCACTGGGAATTTTGGAACTTTGTACAGGCTGAGGAAGCAAGAACAGCTCTAGGGCGAA AGGATAGTGATAGCGATTCTATTTCGA