Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0481500-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:18169120:18172321:1 gene:Os10g0481500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLOT1 description:Similar to Flotillin-like protein 1. (Os10t0481500-00)
Sequence

ATGGGGTTCGCGTACAGGATCGCGAGCGCGTCGGAGTACCTGGCGATCACCGGGTACGGC
ATCGCCGACGTGAAGCTGGCGAAGAAGGCGTGGGTGGCGCCGGGGCAGCGGTGCACCCGC
TTCGATATCTCCCCGGTGAACTACACCTTCGAGGTGCAGGCCATGAGCGCCGAGAAGCTC
CCCTTCATCCTCCCGGCCGTCTTCACCATCGGCCCCCGCGCCGACGACGACGACTGCCTC
CTCCGCTACGCCAAGCTCATCTCCCCGCACGACAAGCTCTCCCACCACGTCAACGAGCTC
GTCAAGGGCGTCATCGAGGGTGAGACCCGCGTGCTGGCCGCCTCCATGACCATGGAGGAG
ATCTTCCAGGGCACCAAGTCCTTCAAGCAGGCCGTCTTCGAGAACGTCCAGCTGGAGCTC
AACCAGTTCGGCCTCATCATCTACAACGCCAACGTCAAGCAGCTCGTCGACGTCGCCGGC
CACGAGTACTTCTCCTACCTCGGCCAGAAGACGCAGCAGGAGGCGGTGAACCAGGCGAAG
GTGGACGTCGCGGAGGCGCGGATGAAGGGGGAGGTCGGCGCCAAGGAGAGGGACGGGATG
ACGCGGCAGAACGCCGCCAAGGTGGACGCCGAGACGAAGGTGTACACGGTGAAGCGGCAG
GGCGAGGGGGCGAAGGAGGAGGCGAGGGTGAAGGCGGAGGTGAAGGTGTTCGAGAACGAG
AGGGAGGCGGAGGTGGCCGAAGCGAACGCTGACCTGGCGATGAAGAAGGCCGGGTGGCAA
CGACAGGCGATGGTGGCTGAAGTGGAGGCCGCCAAGGCGGTCGCCATTCGTGAAGCCGAG
CTGCAGGTGGAGGTGGAACGGACTAACGCCTCTAGGCAGACTGAGAAGCTCAAGGCCGAG
CATCTCAGCAAGGCTGTCGTCGACTACGAGATGAAGGTGCAAGAAGCGAACTGGGAGCTG
TACAACCGGCAGAAGGCGGCGGAGGCTCTGCTGTACGAGCAGGAGAAGCAGGCGGAGGCG
CGGCGCGCGTCGGCGGACGCGGCCTTCTTCGCGCGGCAGCGCGAGGCCGAGGCGGAGCTC
TACGCCAAGCAGAAGGAGGCCGAGGGCCTGGTGGCCATGGGCGACGCCCAGAGCGCCTAC
CTCTCCGCCATGCTCGGCGCGCTCGGCGGCAGCTACGCCGCGCTCCGGGACTACCTCATG
GTCAGCTCCGGCGTGTACCAGGAGATGGCGCGCATCAACGCCGACGCCATCAGGGGGCTG
GAGCCCAAGATCAGCGTGTGGAGCAACGGCGCCGGCGCCGGCGGCGAGGTCGGCGAAGGC
GGTGGCGCGATGAAGGAGGTGGCCGGGGTGTACAAGATGCTGCCGCCGCTGCTGACGACG
GTGCACGAGCAGACCGGGATGCTGCCGCCGGCGTGGATGGGCACTCTGACTGGCGGCGCC
CCCTCGTCGACCAGTTGA

Peptide Sequence

PEP ID

Os10t0481500-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:18169120:18172321:1 gene:Os10g0481500 transcript:Os10t0481500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLOT1 description:Similar to Flotillin-like protein 1. (Os10t0481500-00)
Sequence

MGFAYRIASASEYLAITGYGIADVKLAKKAWVAPGQRCTRFDISPVNYTFEVQAMSAEKL
PFILPAVFTIGPRADDDDCLLRYAKLISPHDKLSHHVNELVKGVIEGETRVLAASMTMEE
IFQGTKSFKQAVFENVQLELNQFGLIIYNANVKQLVDVAGHEYFSYLGQKTQQEAVNQAK
VDVAEARMKGEVGAKERDGMTRQNAAKVDAETKVYTVKRQGEGAKEEARVKAEVKVFENE
REAEVAEANADLAMKKAGWQRQAMVAEVEAAKAVAIREAELQVEVERTNASRQTEKLKAE
HLSKAVVDYEMKVQEANWELYNRQKAAEALLYEQEKQAEARRASADAAFFARQREAEAEL
YAKQKEAEGLVAMGDAQSAYLSAMLGALGGSYAALRDYLMVSSGVYQEMARINADAIRGL
EPKISVWSNGAGAGGEVGEGGGAMKEVAGVYKMLPPLLTTVHEQTGMLPPAWMGTLTGGA
PSSTS

Transcript Sequence

Transcript ID

Os10t0481500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:18169120:18172321:1 gene:Os10g0481500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLOT1 description:Similar to Flotillin-like protein 1. (Os10t0481500-00)
Sequence

ATGGGGTTCGCGTACAGGATCGCGAGCGCGTCGGAGTACCTGGCGATCACCGGGTACGGC
ATCGCCGACGTGAAGCTGGCGAAGAAGGCGTGGGTGGCGCCGGGGCAGCGGTGCACCCGC
TTCGATATCTCCCCGGTGAACTACACCTTCGAGGTGCAGGCCATGAGCGCCGAGAAGCTC
CCCTTCATCCTCCCGGCCGTCTTCACCATCGGCCCCCGCGCCGACGACGACGACTGCCTC
CTCCGCTACGCCAAGCTCATCTCCCCGCACGACAAGCTCTCCCACCACGTCAACGAGCTC
GTCAAGGGCGTCATCGAGGGTGAGACCCGCGTGCTGGCCGCCTCCATGACCATGGAGGAG
ATCTTCCAGGGCACCAAGTCCTTCAAGCAGGCCGTCTTCGAGAACGTCCAGCTGGAGCTC
AACCAGTTCGGCCTCATCATCTACAACGCCAACGTCAAGCAGCTCGTCGACGTCGCCGGC
CACGAGTACTTCTCCTACCTCGGCCAGAAGACGCAGCAGGAGGCGGTGAACCAGGCGAAG
GTGGACGTCGCGGAGGCGCGGATGAAGGGGGAGGTCGGCGCCAAGGAGAGGGACGGGATG
ACGCGGCAGAACGCCGCCAAGGTGGACGCCGAGACGAAGGTGTACACGGTGAAGCGGCAG
GGCGAGGGGGCGAAGGAGGAGGCGAGGGTGAAGGCGGAGGTGAAGGTGTTCGAGAACGAG
AGGGAGGCGGAGGTGGCCGAAGCGAACGCTGACCTGGCGATGAAGAAGGCCGGGTGGCAA
CGACAGGCGATGGTGGCTGAAGTGGAGGCCGCCAAGGCGGTCGCCATTCGTGAAGCCGAG
CTGCAGGTGGAGGTGGAACGGACTAACGCCTCTAGGCAGACTGAGAAGCTCAAGGCCGAG
CATCTCAGCAAGGCTGTCGTCGACTACGAGATGAAGGTGCAAGAAGCGAACTGGGAGCTG
TACAACCGGCAGAAGGCGGCGGAGGCTCTGCTGTACGAGCAGGAGAAGCAGGCGGAGGCG
CGGCGCGCGTCGGCGGACGCGGCCTTCTTCGCGCGGCAGCGCGAGGCCGAGGCGGAGCTC
TACGCCAAGCAGAAGGAGGCCGAGGGCCTGGTGGCCATGGGCGACGCCCAGAGCGCCTAC
CTCTCCGCCATGCTCGGCGCGCTCGGCGGCAGCTACGCCGCGCTCCGGGACTACCTCATG
GTCAGCTCCGGCGTGTACCAGGAGATGGCGCGCATCAACGCCGACGCCATCAGGGGGCTG
GAGCCCAAGATCAGCGTGTGGAGCAACGGCGCCGGCGCCGGCGGCGAGGTCGGCGAAGGC
GGTGGCGCGATGAAGGAGGTGGCCGGGGTGTACAAGATGCTGCCGCCGCTGCTGACGACG
GTGCACGAGCAGACCGGGATGCTGCCGCCGGCGTGGATGGGCACTCTGACTGGCGGCGCC
CCCTCGTCGACCAGTTGACCTTG