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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0481400-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:18150730:18152862:-1 gene:Os10g0481400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein, expressed. (Os10t0481400-01);Similar to Zinc finger, C3HC4 type family protein, expressed. (Os10t0481400-02)
Sequence

ATGATCAGCATCCTCGCGCAGGAGCGCCTCCTCGGGTTCGCCCTGGGCTCCGTCTCCATG
GGAGGGTTCGTCCTCCACCAGCGGCGCGCCATCTACCGCTCCCTCGCCGACGCCGACGCT
GCCGCTGCCCCGTCGCCCTTCTCCTCCTACCAGCCTAGTGAAACCAGAAGTAGAACAAGC
TCAACTGAATTGGCTCACGTATGGAACAAGGGAGTGGATGAGACTCTCGGACGACTTGTT
GCATACCTCAGCTCTCGTGGATGGTAA

Peptide Sequence

PEP ID

Os10t0481400-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:18150730:18152862:-1 gene:Os10g0481400 transcript:Os10t0481400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein, expressed. (Os10t0481400-01);Similar to Zinc finger, C3HC4 type family protein, expressed. (Os10t0481400-02)
Sequence

MISILAQERLLGFALGSVSMGGFVLHQRRAIYRSLADADAAAAPSPFSSYQPSETRSRTS
STELAHVWNKGVDETLGRLVAYLSSRGW

Transcript Sequence

Transcript ID

Os10t0481400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:18150730:18152862:-1 gene:Os10g0481400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein, expressed. (Os10t0481400-01);Similar to Zinc finger, C3HC4 type family protein, expressed. (Os10t0481400-02)
Sequence

AGGGCCGCGGAAACCGTGGAAGAAGAAGCGGAGGACACCTACCCCCACAAATCTCGTCGT
CTCGCTCGCCGGCGGCCGCCGCCACCGCCACCACCGCCGCCGCGATGATCAGCATCCTCG
CGCAGGAGCGCCTCCTCGGGTTCGCCCTGGGCTCCGTCTCCATGGGAGGGTTCGTCCTCC
ACCAGCGGCGCGCCATCTACCGCTCCCTCGCCGACGCCGACGCTGCCGCTGCCCCGTCGC
CCTTCTCCTCCTACCAGCCTAGTGAAACCAGAAGTAGAACAAGCTCAACTGAATTGGCTC
ACGTATGGAACAAGGGAGTGGATGAGACTCTCGGACGACTTGTTGCATACCTCAGCTCTC
GTGGATGGTAATTCAAGCATTATCTGGTTGGGCGTGCCAAAGTTAACAGGTGGAGCATGC
CTCCCCGGTCATGTCATTGTTGTGCTATGATGTACTCACATTTCTTTGAACCCATAGCTG
AATACAATGATGTCTTTTTCTTTTTAATTTAAGAAAGGTTGAACGATATCATGGATGAAT
GGATGGATCAATATCCTATTTGTCCCAGAAAAAATGTTCTTTCTGCTACAATTCTTGCAT
GTATTACACACTTCGGGGACTTCATACTGGCCCTGTCTATATGCTTCGTTTTGAAGCGAA
TATTCGTGTTGGCAATTCGTATTAACAGGCTATGATAATACTACTGCTGATGT