Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0479500-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:18000856:18005796:1 gene:Os10g0479500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LONELY GUY LIKE PHOSPHORIBOHYDROLASE 10 description:Similar to carboxy-lyase. (Os10t0479500-01)
Sequence

ATGAGGCAGTCGAGGTTCAAGAGGATCTGCGTCTTCTGCGGCAGCAGCCAGGGGAAGAAG
AGGAGCTACCATGACGCCGCCATTGAGCTCGGCAACGAGCTGGTGGCGAGGAGCATAGAC
CTGGTGTACGGCGGCGGCAGCATCGGCCTCATGGGGCTCGTCTCTCAGGCGGTCTTCGAC
GGCGGCCGCCACGTCATCGGGGTCATTCCCAAGACTCTCATGACGCCAGAGATAAGTGGT
GAGACAGTGGGGGAGGTGAGGCCAGTTGCTGATATGCACCAAAGGAAGGCAGAGATGGCA
AGGCAGTCTGATGCCTTCATAGCCCTACCTGGAGGGTACGGGACTCTGGAGGAGCTGCTC
GAGGTGATTACATGGGCACAGCTTGGCATCCATCATAAGCCGGTTGGGCTGCTCAACGTC
GACGGGTACTACAACTCGCTGCTGACGTTCATCGACAAGGCGGTGGAGGAAGGGTTCATC
AACACCAGCGCGCGGCGGATCATCGTCATGGCGCCGACGGCGGAGGAGCTGATGGACAAG
CTAGAGGAGTACGTGCCTTACCACGACAGGGTGGCATCGAAGCTGAACTGGGAGATGGGC
CACCTAGGTTACTGA

Peptide Sequence

PEP ID

Os10t0479500-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:18000856:18005796:1 gene:Os10g0479500 transcript:Os10t0479500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LONELY GUY LIKE PHOSPHORIBOHYDROLASE 10 description:Similar to carboxy-lyase. (Os10t0479500-01)
Sequence

MRQSRFKRICVFCGSSQGKKRSYHDAAIELGNELVARSIDLVYGGGSIGLMGLVSQAVFD
GGRHVIGVIPKTLMTPEISGETVGEVRPVADMHQRKAEMARQSDAFIALPGGYGTLEELL
EVITWAQLGIHHKPVGLLNVDGYYNSLLTFIDKAVEEGFINTSARRIIVMAPTAEELMDK
LEEYVPYHDRVASKLNWEMGHLGY

Transcript Sequence

Transcript ID

Os10t0479500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:18000856:18005796:1 gene:Os10g0479500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LONELY GUY LIKE PHOSPHORIBOHYDROLASE 10 description:Similar to carboxy-lyase. (Os10t0479500-01)
Sequence

GGGAGATTGCTAGCTGATCACAAGGAACCCGTCGTTGCAGCAGCAGCAGCGTAGTGCGCT
TGCTTGCACTAGCAGCAGCACAGTGACGACGACGCTAGCTAAGGGCAGAGGAGAGGAGGG
TGATAAATACAGGCAATTACTAGCTAGCTGTTTCACTGCAAGGATTAGATAGATCGTAGA
GAGTAGCAAGAAGAGAAGAGAATAGTAGAGGAGAGAGAGATGAGGCAGTCGAGGTTCAAG
AGGATCTGCGTCTTCTGCGGCAGCAGCCAGGGGAAGAAGAGGAGCTACCATGACGCCGCC
ATTGAGCTCGGCAACGAGCTGGTGGCGAGGAGCATAGACCTGGTGTACGGCGGCGGCAGC
ATCGGCCTCATGGGGCTCGTCTCTCAGGCGGTCTTCGACGGCGGCCGCCACGTCATCGGG
GTCATTCCCAAGACTCTCATGACGCCAGAGATAAGTGGTGAGACAGTGGGGGAGGTGAGG
CCAGTTGCTGATATGCACCAAAGGAAGGCAGAGATGGCAAGGCAGTCTGATGCCTTCATA
GCCCTACCTGGAGGGTACGGGACTCTGGAGGAGCTGCTCGAGGTGATTACATGGGCACAG
CTTGGCATCCATCATAAGCCGGTTGGGCTGCTCAACGTCGACGGGTACTACAACTCGCTG
CTGACGTTCATCGACAAGGCGGTGGAGGAAGGGTTCATCAACACCAGCGCGCGGCGGATC
ATCGTCATGGCGCCGACGGCGGAGGAGCTGATGGACAAGCTAGAGGAGTACGTGCCTTAC
CACGACAGGGTGGCATCGAAGCTGAACTGGGAGATGGGCCACCTAGGTTACTGACGTACT
CACTTACAGCTGCAGCAAATTGCCAGACAGCAATGGCGATCGATCGATCAGAAGACGTAG
GAGGAGGAGGAAGAAGAAGAAGAAGAATCAAGTCGATCGACTCATCATCAAGAAGCTGGG
AAAGATTTGGTTGATGCAGCTAGAAAGCCAAGAACGAGAGTGTGGCGTGCGTGCGTCCAT
TTTGTATATGTTTGCTTCGATCAGGGGCAGCTTGAATACTGTAGTAACTTGGATGCTTGA
TGTCCTCTTGATCTTCTACCTAGCTACCGAGATAAGAACTAGTAGTAGTAGTAGTAGTAG
TAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTATTCCAGTAGCGTATGT
ATGTCAGTAATTTTCAAGATATCCAGATTCGATTGACCACAGCAAAGTTGTTTTTGTATC
ACCCTCGTAATGCAATGTGTGTAACTAAGCGTTGAGAGGCTGACTCATTGATCTGACTGA
GGTCTGAATTGGATTGGTTCCAAAATC