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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0478000-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:17888297:17889724:-1 gene:Os10g0478000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:G1 LIKE PROTEIN 5 description:Transcriptional regulator, Regulator of meristem activity, Regulation of inflorescence development (Os10t0478000-01)
Sequence

ATGGAGTTCGTGGCGCACGCGGCGGCGCCGGACAGCCCGCACTCGGACAGCGGCGGAGGA
GGAGGGGGAATGGCGACGGGGGCGACGTCGGCGTCGGCGGCGGGGGCGTCGCCGAGCAGG
TACGAGTCGCAGAAGCGGCGGGACTGGAACACGTTCGGGCAGTACCTCCGCAACCACCGG
CCGCCGCTGTCGCTGGCGCGGTGCAGCGGCGCGCACGTCCTGGAGTTCCTCCGCTACCTG
GACCAGTTCGGCAAGACCAAGGTGCACGCGCCGGCGTGCCCCTTCTTCGGCCACCCGGCG
CCGCCGGCGCCGTGCCCGTGCCCGCTTCGCCAGGCGTGGGGCAGCCTCGACGCCCTCGTC
GGCCGCCTCCGCGCCGCCTACGAGGAGAACGGCGGCCGCCCCGAGAACAACCCCTTCGGC
GCCCGCGCCGTCCGCCTCTACCTCCGCGAGGTCCGCGAGCACCAGGCGCGCGCACGCGGC
GTCAGCTACGAGAAGAAGAAGCGCAAGAAGCCACCCCACCCCTCCTCCGCCGCCGCCGCG
CACGACGACGCCGCCAACGGCGCCCTCCACCACCACCACCACATGCCGCCGCCTCCTCCC
GGCGCCGCCGCCTGA

Peptide Sequence

PEP ID

Os10t0478000-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:17888297:17889724:-1 gene:Os10g0478000 transcript:Os10t0478000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:G1 LIKE PROTEIN 5 description:Transcriptional regulator, Regulator of meristem activity, Regulation of inflorescence development (Os10t0478000-01)
Sequence

MEFVAHAAAPDSPHSDSGGGGGGMATGATSASAAGASPSRYESQKRRDWNTFGQYLRNHR
PPLSLARCSGAHVLEFLRYLDQFGKTKVHAPACPFFGHPAPPAPCPCPLRQAWGSLDALV
GRLRAAYEENGGRPENNPFGARAVRLYLREVREHQARARGVSYEKKKRKKPPHPSSAAAA
HDDAANGALHHHHHMPPPPPGAAA

Transcript Sequence

Transcript ID

Os10t0478000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:17888297:17889724:-1 gene:Os10g0478000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:G1 LIKE PROTEIN 5 description:Transcriptional regulator, Regulator of meristem activity, Regulation of inflorescence development (Os10t0478000-01)
Sequence

GCTATCGGCTCCTTCTCGCCCAGCTTTTGCTCACGTCACATCACCTTCCACCTCCACCCC
TCCACTCGCTCGCTCGCTTGCTTGCTCCAATTAATACCTCTTCTCCTTCTCCCCCAGCAA
CTAGCTTCCTTCTCCGCTTTTGCAGCTCGCCGCCGCCGCCGCCGCCGCCGCCGCGACACG
GCGCGCATATGGTCGTCGTCGTCGTCGTCGTCGTCGCTGGAGAAGACGAAGAAAGATAGT
AGACCTGAGCTGGGGGGGCGGTGAATTCGCCGGAGAGCTAGCTAAGATCGACGATGGAGT
TCGTGGCGCACGCGGCGGCGCCGGACAGCCCGCACTCGGACAGCGGCGGAGGAGGAGGGG
GAATGGCGACGGGGGCGACGTCGGCGTCGGCGGCGGGGGCGTCGCCGAGCAGGTACGAGT
CGCAGAAGCGGCGGGACTGGAACACGTTCGGGCAGTACCTCCGCAACCACCGGCCGCCGC
TGTCGCTGGCGCGGTGCAGCGGCGCGCACGTCCTGGAGTTCCTCCGCTACCTGGACCAGT
TCGGCAAGACCAAGGTGCACGCGCCGGCGTGCCCCTTCTTCGGCCACCCGGCGCCGCCGG
CGCCGTGCCCGTGCCCGCTTCGCCAGGCGTGGGGCAGCCTCGACGCCCTCGTCGGCCGCC
TCCGCGCCGCCTACGAGGAGAACGGCGGCCGCCCCGAGAACAACCCCTTCGGCGCCCGCG
CCGTCCGCCTCTACCTCCGCGAGGTCCGCGAGCACCAGGCGCGCGCACGCGGCGTCAGCT
ACGAGAAGAAGAAGCGCAAGAAGCCACCCCACCCCTCCTCCGCCGCCGCCGCGCACGACG
ACGCCGCCAACGGCGCCCTCCACCACCACCACCACATGCCGCCGCCTCCTCCCGGCGCCG
CCGCCTGAGCCGAGCCGAGCTTGCTCCAAGATCGCCGGAAAACGAGCTGCTAGCCTCCTA
CGCATGCACTAGTTACTCCACTCCACTCCACTCCACTATGATCCCTAGCTAGGCTGCTCT
TGCTACTAGCAAAACTACGGATTAATCTCCATGCTTGCTACTGCTGCTGCTGCTGCTACT
GCATCTAATTAATTAGGTTGATTATTTCCT