Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0477800-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:17857988:17872546:1 gene:Os10g0477800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nuclear transportin. (Os10t0477800-01);Similar to Importin-beta N-terminal domain containing protein. (Os10t0477800-02)
Sequence	ATGGAGGCGCAGGCCACGGCGGCGGTGAAGGAGGCGCTGGCGGCGCTGTACCACCACCCC GACGACGCCACGCGCACCGCCGCCGACCGGTGGCTGCAGCAGTTCCAGCACACGCTCGAC GCGTGGCAGGTAGCTGACAGCTTACTTCATGATGAAAGTAGTAATATGGAGACTCAAATC TTCTGCTCTCAAACCCTCAGAAGCAAGGTACAAAGGGACTTTGAAGAATTACCTTCAGAA GCTTTCCGTCCGCTACAAGATTCTCTATATGCATTGCTGAAAAAATTTAGTAAAGGGCCA CAAAAAGTTAGAACACAGATTTGCATTGCAATGGCTGCTCTTGCGGTGCATGTACCTGTA GAGGACTGGGGAGGTGGTGGGATTGTGAATTGGCTAAGTGATGAAATGAACTCTCAACAA GACTTTATCCCAAGCTTCCTTGAGCTGCTAACTGTTTTGCCACAGGAATGTTCTAGTCAT AAAATAGCAGCTCGTCCTGAAAGGCGCCGACAGTTTGAGAATGACCTTCGTTCATCAGCC GAAGTTGCACTTAGTCTATTGACTGCTTGCTTGGGTATTGATCAACTGAAAGAACAGGTT CTGGAGGGTTTTGCTTCTTGGCTTCGTTTTTGTCATGGAATCTCCGCATCTAATCTTGCT TCGCTTCCTTTGGTCTATACGGCACTTTCTTCGTTGAACTCTGACCAATTTTTGGAGGCA GCTGTAAATGTTACTTCCGAATTGATACATTTTACGGTATCTCGAGAATCTAATGGCATC ACCGAACAGCTTCCACTGATTCAAGTTCTCATTCCTTATGTTATGGGTCTTAAGGAGCAA CTCAAAGATTCATCGAAGGATGAAGAAGATGTAAAAGCTATTGCCCGTTTGTTGGCAGAC ATGGGTGATTCTTATGTTGAGTTGATTGCAGCAGGTTCTGATGATGCCATGCAGATAGTG AATGCATTACTGGAAGTTACTTCTCATTCAGAATTTGACATTTCCTCCATGACATTTAAT TTCTGGCATCATCTTATGCGTAACCTGACCGATAGGGGTTCGTACGCATCATATGGATCT GAGGTCTCAATCAACACTGAGAGGAATAGAAGATTGCAGCTATTTCGTCAACCTTTTGAA ATTCTTGTTTCTCTGGTAAGTTTCCGAGTTGAATATCCTGAGCTCTACCACACCTTTTCG GAGGAAGACCAAAGGGATTTCAGACATTCCAGATATGCGGTTAGTGATGTATTACTTGAC GCAACTGATGTTCTTGGAGGTGATCCGACGCTGAAAATACTTTTCACGAAGCTGATTCAG GCATGTGGAAATGGACAGAACCAAAAATGGCAGCCTGTCGAGGCTGCGCTGTTCTGTATA CAAGCCATTGCTAAGTCAGTCTCAGTTGAAGAGAATGAAATACTACCACAGGTCATGTCA CTGCTTCCCAGCTTTCCTCATCAAGAACAGTTGCTGCAAACAGTTTGTTCACTCGTTGGA GCATTTTCAAAATGGATTGAAGCCGCACCATCTGAACTGTTGATACTACCACCTCTGGTT GATATTCTCAACAAGGGTATGAGTACATCAGAGGAAACAGCTGCAGCTGCTTCTGTGGCA TTCAAGTATATATGTGAAGACTGTAGGAGAAAGTTCTCTGGTTCGTTGGATGGCCTTTTC CAGATTTACCAAATTGCATTAAGTGGAGTTGGTGGTTACAAAGTTTCTTCAGAGGACTCA TTGCATTTGGTTGAAGCCTTAAGTGTGGTTATCACGACTCTCCCACCAGACCATGCTCAA AGAGCATTGGAGTTAATCTGCCAACCAGTAATTAATCCCTTGCAGGAAATAATCCAGCAA GGAGATACAGTGCTTCAGCAAGTTCCTGTTCGGCAATTAACCTTGCATATAGACCGATTA TCATGCATTTTTAGCAATGTGAAACTTCCACAAGTAGTTGCTGACGCTGTCAATAGATAT TGGCCAACATTGAAAAGTATTTTTGATCAACGGGCATGGGATACACGGACCATGGAGTCA CTATGTCGTTCTTGCAAATTTGCTGTAAGGACATGCGGGAGGTTCATGGGATTCACCATT GGTGCAATGCTTGAAGAAATCCAAACTCTGTATCAGCAACACAATCAGGCTTGCTTCCTT TACTTGTCGAGTGAAGTTATTAAGATATTTGGGTCCGATCCAGCATGTGCAAACTATCTT GCAAGTCTGATTCAGGCACTTTTTGGCCATACAATACAGCTCCTTCGGACTATTCAGGAT TTTACAGCTAGACCGGATATAGCTGATGATTGCTTCCTGCTAGCATCAAGATGTATTCGT TACTGTCCAGATTTATTTGTACCTACAGAGATGTTTCCAAGATTGGTTGACTGTGCAATG GTTGGTATAACTATACAGCACAGGGAGGCATGCAAGTCTATATTATCTTTTCTATCTGAT GTATTTGATCTTGCAAAATCACCTGAGGGGGAAAAGTACCGAGAATTAATAAATACAGTT ATACTTCAGCGGGGTGCAGTACTTACTAGAATAATGGTTGCTTCCTTAACAGGAGCTCTG CCATCTAGTCGCTTGGAAGAGGTCTCGTATGTTCTGGTGTCCCTTAGCAGATCATTTGGT GGGAACATGTTGAGTTGGGCAAGGGAATGTATTACCCTTATACCACCACAAGCCTTGACA GATTCAGAACGTTCAAGATTCTTGAATATTATATCTGATGCATCATCAGGATCTAGTCTT GGTTCCATAACAGATAGATTTGCAGAAATCTCAGAAGTTTGTAGAAGGAACAAAACTGTG CAAGACATAGTTCAAGGTGCTTTGCGGCCACATGATTTATCCTTCACGGTTGCCCCCCCG CCATTGTGA

Peptide Sequence

PEP ID	Os10t0477800-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:17857988:17872546:1 gene:Os10g0477800 transcript:Os10t0477800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nuclear transportin. (Os10t0477800-01);Similar to Importin-beta N-terminal domain containing protein. (Os10t0477800-02)
Sequence	MEAQATAAVKEALAALYHHPDDATRTAADRWLQQFQHTLDAWQVADSLLHDESSNMETQI FCSQTLRSKVQRDFEELPSEAFRPLQDSLYALLKKFSKGPQKVRTQICIAMAALAVHVPV EDWGGGGIVNWLSDEMNSQQDFIPSFLELLTVLPQECSSHKIAARPERRRQFENDLRSSA EVALSLLTACLGIDQLKEQVLEGFASWLRFCHGISASNLASLPLVYTALSSLNSDQFLEA AVNVTSELIHFTVSRESNGITEQLPLIQVLIPYVMGLKEQLKDSSKDEEDVKAIARLLAD MGDSYVELIAAGSDDAMQIVNALLEVTSHSEFDISSMTFNFWHHLMRNLTDRGSYASYGS EVSINTERNRRLQLFRQPFEILVSLVSFRVEYPELYHTFSEEDQRDFRHSRYAVSDVLLD ATDVLGGDPTLKILFTKLIQACGNGQNQKWQPVEAALFCIQAIAKSVSVEENEILPQVMS LLPSFPHQEQLLQTVCSLVGAFSKWIEAAPSELLILPPLVDILNKGMSTSEETAAAASVA FKYICEDCRRKFSGSLDGLFQIYQIALSGVGGYKVSSEDSLHLVEALSVVITTLPPDHAQ RALELICQPVINPLQEIIQQGDTVLQQVPVRQLTLHIDRLSCIFSNVKLPQVVADAVNRY WPTLKSIFDQRAWDTRTMESLCRSCKFAVRTCGRFMGFTIGAMLEEIQTLYQQHNQACFL YLSSEVIKIFGSDPACANYLASLIQALFGHTIQLLRTIQDFTARPDIADDCFLLASRCIR YCPDLFVPTEMFPRLVDCAMVGITIQHREACKSILSFLSDVFDLAKSPEGEKYRELINTV ILQRGAVLTRIMVASLTGALPSSRLEEVSYVLVSLSRSFGGNMLSWARECITLIPPQALT DSERSRFLNIISDASSGSSLGSITDRFAEISEVCRRNKTVQDIVQGALRPHDLSFTVAPP PL

Transcript Sequence

Transcript ID	Os10t0477800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:17857988:17872546:1 gene:Os10g0477800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nuclear transportin. (Os10t0477800-01);Similar to Importin-beta N-terminal domain containing protein. (Os10t0477800-02)
Sequence	TCCATCGAAATCCTTCCGCCGCGTTTCAAATTTCTTTCTCTCCTCCGCCCTAAAACCCTA CCCACCCCCACCCCCACCCCCACCCCCACCCGCCGGCAGATCCAGCGAACTCGCCGGAGA TCGCATCGGCGGCGGCGGCGAGGGTAGGGTTCTGGTGGTGGTGCTAGTGTGTGTGGGTGT GGGAGGAGGGGCTCCCCGCGCCGCGCGTGTGGGGGGGACATATGGAGGCGCAGGCCACGG CGGCGGTGAAGGAGGCGCTGGCGGCGCTGTACCACCACCCCGACGACGCCACGCGCACCG CCGCCGACCGGTGGCTGCAGCAGTTCCAGCACACGCTCGACGCGTGGCAGGTAGCTGACA GCTTACTTCATGATGAAAGTAGTAATATGGAGACTCAAATCTTCTGCTCTCAAACCCTCA GAAGCAAGGTACAAAGGGACTTTGAAGAATTACCTTCAGAAGCTTTCCGTCCGCTACAAG ATTCTCTATATGCATTGCTGAAAAAATTTAGTAAAGGGCCACAAAAAGTTAGAACACAGA TTTGCATTGCAATGGCTGCTCTTGCGGTGCATGTACCTGTAGAGGACTGGGGAGGTGGTG GGATTGTGAATTGGCTAAGTGATGAAATGAACTCTCAACAAGACTTTATCCCAAGCTTCC TTGAGCTGCTAACTGTTTTGCCACAGGAATGTTCTAGTCATAAAATAGCAGCTCGTCCTG AAAGGCGCCGACAGTTTGAGAATGACCTTCGTTCATCAGCCGAAGTTGCACTTAGTCTAT TGACTGCTTGCTTGGGTATTGATCAACTGAAAGAACAGGTTCTGGAGGGTTTTGCTTCTT GGCTTCGTTTTTGTCATGGAATCTCCGCATCTAATCTTGCTTCGCTTCCTTTGGTCTATA CGGCACTTTCTTCGTTGAACTCTGACCAATTTTTGGAGGCAGCTGTAAATGTTACTTCCG AATTGATACATTTTACGGTATCTCGAGAATCTAATGGCATCACCGAACAGCTTCCACTGA TTCAAGTTCTCATTCCTTATGTTATGGGTCTTAAGGAGCAACTCAAAGATTCATCGAAGG ATGAAGAAGATGTAAAAGCTATTGCCCGTTTGTTGGCAGACATGGGTGATTCTTATGTTG AGTTGATTGCAGCAGGTTCTGATGATGCCATGCAGATAGTGAATGCATTACTGGAAGTTA CTTCTCATTCAGAATTTGACATTTCCTCCATGACATTTAATTTCTGGCATCATCTTATGC GTAACCTGACCGATAGGGGTTCGTACGCATCATATGGATCTGAGGTCTCAATCAACACTG AGAGGAATAGAAGATTGCAGCTATTTCGTCAACCTTTTGAAATTCTTGTTTCTCTGGTAA GTTTCCGAGTTGAATATCCTGAGCTCTACCACACCTTTTCGGAGGAAGACCAAAGGGATT TCAGACATTCCAGATATGCGGTTAGTGATGTATTACTTGACGCAACTGATGTTCTTGGAG GTGATCCGACGCTGAAAATACTTTTCACGAAGCTGATTCAGGCATGTGGAAATGGACAGA ACCAAAAATGGCAGCCTGTCGAGGCTGCGCTGTTCTGTATACAAGCCATTGCTAAGTCAG TCTCAGTTGAAGAGAATGAAATACTACCACAGGTCATGTCACTGCTTCCCAGCTTTCCTC ATCAAGAACAGTTGCTGCAAACAGTTTGTTCACTCGTTGGAGCATTTTCAAAATGGATTG AAGCCGCACCATCTGAACTGTTGATACTACCACCTCTGGTTGATATTCTCAACAAGGGTA TGAGTACATCAGAGGAAACAGCTGCAGCTGCTTCTGTGGCATTCAAGTATATATGTGAAG ACTGTAGGAGAAAGTTCTCTGGTTCGTTGGATGGCCTTTTCCAGATTTACCAAATTGCAT TAAGTGGAGTTGGTGGTTACAAAGTTTCTTCAGAGGACTCATTGCATTTGGTTGAAGCCT TAAGTGTGGTTATCACGACTCTCCCACCAGACCATGCTCAAAGAGCATTGGAGTTAATCT GCCAACCAGTAATTAATCCCTTGCAGGAAATAATCCAGCAAGGAGATACAGTGCTTCAGC AAGTTCCTGTTCGGCAATTAACCTTGCATATAGACCGATTATCATGCATTTTTAGCAATG TGAAACTTCCACAAGTAGTTGCTGACGCTGTCAATAGATATTGGCCAACATTGAAAAGTA TTTTTGATCAACGGGCATGGGATACACGGACCATGGAGTCACTATGTCGTTCTTGCAAAT TTGCTGTAAGGACATGCGGGAGGTTCATGGGATTCACCATTGGTGCAATGCTTGAAGAAA TCCAAACTCTGTATCAGCAACACAATCAGGCTTGCTTCCTTTACTTGTCGAGTGAAGTTA TTAAGATATTTGGGTCCGATCCAGCATGTGCAAACTATCTTGCAAGTCTGATTCAGGCAC TTTTTGGCCATACAATACAGCTCCTTCGGACTATTCAGGATTTTACAGCTAGACCGGATA TAGCTGATGATTGCTTCCTGCTAGCATCAAGATGTATTCGTTACTGTCCAGATTTATTTG TACCTACAGAGATGTTTCCAAGATTGGTTGACTGTGCAATGGTTGGTATAACTATACAGC ACAGGGAGGCATGCAAGTCTATATTATCTTTTCTATCTGATGTATTTGATCTTGCAAAAT CACCTGAGGGGGAAAAGTACCGAGAATTAATAAATACAGTTATACTTCAGCGGGGTGCAG TACTTACTAGAATAATGGTTGCTTCCTTAACAGGAGCTCTGCCATCTAGTCGCTTGGAAG AGGTCTCGTATGTTCTGGTGTCCCTTAGCAGATCATTTGGTGGGAACATGTTGAGTTGGG CAAGGGAATGTATTACCCTTATACCACCACAAGCCTTGACAGATTCAGAACGTTCAAGAT TCTTGAATATTATATCTGATGCATCATCAGGATCTAGTCTTGGTTCCATAACAGATAGAT TTGCAGAAATCTCAGAAGTTTGTAGAAGGAACAAAACTGTGCAAGACATAGTTCAAGGTG CTTTGCGGCCACATGATTTATCCTTCACGGTTGCCCCCCCGCCATTGTGAGAACAGGACG TTTATACAAGACCAACTGAAAGTCCATGGCGGTTCATCTTTAGTCAGTGTTGGTTTATGC CTCCACAGCTTCTTTGGATCTTTTTTTCTACTTCATACAGGTTTGAGTTGCGGCACCATA CTGTTCAGATTTGTTCAGAGGATAGATAGGTTAGTGGTGGTCACTGTAATTCTTTTGTAT TTCGTCGTCACTGTACATGTTCCATGCATTGTGTATCTGGGAGGAAAGTTGTGTTGTATT ATGTCAAAAACGAGGTGGGTATACATCACTGGGGGAGATCACACGGATGGTGATCTGCCT TTGGGCCTGATTTTTCAACGGCCGGCCAGCTTCTATCAATTTAGATGGCCTTCAATTTTT TTATTGTTATGAAGACCTCTTCATTTAAAAGGATCCCTTTTATGTTT