Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0477200-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:17800146:17803220:-1 gene:Os10g0477200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os10t0477200-01)
Sequence	ATGAGGCTTAGAGGCGTCAAGCCAGGGGTCAATTCTTGGAACTGCATCATCTCAGGCTGT GTGCAGAATGCGAGGTATGACGAGGCTTTGAACATTTTTTGCGAGATGTGCGAGAGCGAG AGTCCTGATGCAGTGACTGTGGCTAGCATACTCCCTGCTTGCACTGGCTTGATGGCACTG GGCATTGGAAAGCAGCTGCATTCTTATGTTATACGATGCGGAATCAAGTTAAATGTTTAC ATTGGCTCTTCGTTGATTGGAATGTACTCCGAGTGTGGAGAATTTGGTTATGCGAGAAGC GTGTTTGCAGCCATTGAGGAGAAGAATGCCACTGTGTGGAATGAATTGATTCGGTCATAT ATCAATGAGGAGAGGATGAATGAGGCTTGGGAGGCTTTTCGCTTGATGAAGGAGAATGGA TTGCAGCCTGATACTATCACATATAATAGCTTCATTGCTGCATATGCTAGAGCAGGTCAG AAAGAACAAGCATATACCCTGCTGTCAAACATGGTTGAAATTGGCTTGAAACCTAATGTG GTATCGATGAATGCGTTAATATCCGGTTTGCATCACCATGGCCGTCATGCAGATGCATTG GAAGCTTTCCGATACATGCAGGTCTCGAGTGATGGAGAAGCAAAAGGCTGGGCATTACCT GGCAATTCAATTCAACCAAATGGTACAACCATTACTAGTGTCCTCTCCCTTTTGACAGAT CTCAGGTTAGATCGTCTTGGGAAGGAAGTACACTGTTATGCTTTTCGGAGTGGTTTGATA TCAAACATATTTGTTTCTAGCAAACTGGTTGACCTTTATGGTAAGACTGGTGATGTGGGC ACCGCTGATAAAGTCTTCCGGAGAATCAGTAACAAGAATGTTGTCACATGGAACAGTATA CTAGCATCCTACAGGCAAAATAGGAAGCCAGAAATTGCTTTGAAACTGTTCCATGAAATG ATCAAATCCAATTTACTTCCCAACTTAGTTACATTACAGATTGCTCTTTTGTCTTCTGGT ATGACTATGGCATTGCAGCATGGGAGAGAATTGCATGGTTACATTAGGAAGAACTGGCCA GATGGTTATCCAACTGCTCTTGCAAGTGCTTTGATTGATATGTACGGGAAATGTGGTAAG ATTGAGGATGCTAGATTGGTTTTCGAATGCACTGATGAAAAGGACATAGCAACATGGAAT GCAATAATGAGTGCATACTTGCTACATAGGATACCTGGAGAGGTTAAAAAATTGTTCAAG TATATTGAACAATCTGGAATTCAACCAGATCCTGTGACTTTCATTATACTTCTTTCAGCT TGTAAGCAAGAAGGTTCCATGGAGGAAGCTCGCAGATATTTCTACAGTATGGAAGATGTA TACGGCATACAACCAACCTTAAAACACTATACCTGCATGGTTGACATCATGGGAATGGCT GGCTTACTGGAGGAGTCACTAGAACTTATCCAGAAGATGCAACTTGAACCAGATGGATGC CTATGGTCTATCCTTCTGAAAGCTTGTAAGCTGCACTCAAATCTGGAGATCGGTGAGAAG GCTGCGAAAGCGCTTTTTGAGCTTGAGCCAAACAATACTTCAAATTACATGTCGCTGTCC AATATATATGCCGACAATGGCTTGTGGGAGTCCACTGAGGCTTTGAGGGTTGCCATGACA GAACAGGGGTTAAATGTAGAGAGACAATGTAGCCGCTTGTATCTTGGTACAGATGTACAC ACATTTGAGGCTGGAGATTCCTCGCATCCTGCATTCGAAAAGATTTTGAGTACATGGAAT GACTTATCTGATAGGATGGAACAGTCAGGGTATCCTCCTCAGGATATTGAGCCCTATTCT AATGCCGAAGCTGATCCATTGTCATGCCAACACACCGAGAGGATTGCATTATGTTACGGG CTAATTTCCGTGCGTGTTCATGATCTGATCCGTATCTCAAAGAATTTTAGGATGTGCATG GAATGCCATTCATCAATCAAGTTCATCTCGAGGGATATGAACCGGGAAATATTTGTTTCA GATGGTTGCACCTATCACCATTTTCAGAATGGAGCATGCAGCTGTGGAGATATGTGGTAA

Peptide Sequence

PEP ID	Os10t0477200-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:17800146:17803220:-1 gene:Os10g0477200 transcript:Os10t0477200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os10t0477200-01)
Sequence	MRLRGVKPGVNSWNCIISGCVQNARYDEALNIFCEMCESESPDAVTVASILPACTGLMAL GIGKQLHSYVIRCGIKLNVYIGSSLIGMYSECGEFGYARSVFAAIEEKNATVWNELIRSY INEERMNEAWEAFRLMKENGLQPDTITYNSFIAAYARAGQKEQAYTLLSNMVEIGLKPNV VSMNALISGLHHHGRHADALEAFRYMQVSSDGEAKGWALPGNSIQPNGTTITSVLSLLTD LRLDRLGKEVHCYAFRSGLISNIFVSSKLVDLYGKTGDVGTADKVFRRISNKNVVTWNSI LASYRQNRKPEIALKLFHEMIKSNLLPNLVTLQIALLSSGMTMALQHGRELHGYIRKNWP DGYPTALASALIDMYGKCGKIEDARLVFECTDEKDIATWNAIMSAYLLHRIPGEVKKLFK YIEQSGIQPDPVTFIILLSACKQEGSMEEARRYFYSMEDVYGIQPTLKHYTCMVDIMGMA GLLEESLELIQKMQLEPDGCLWSILLKACKLHSNLEIGEKAAKALFELEPNNTSNYMSLS NIYADNGLWESTEALRVAMTEQGLNVERQCSRLYLGTDVHTFEAGDSSHPAFEKILSTWN DLSDRMEQSGYPPQDIEPYSNAEADPLSCQHTERIALCYGLISVRVHDLIRISKNFRMCM ECHSSIKFISRDMNREIFVSDGCTYHHFQNGACSCGDMW

Transcript Sequence

Transcript ID	Os10t0477200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:17800146:17803220:-1 gene:Os10g0477200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os10t0477200-01)
Sequence	CGGGTTCGCAAGGAATGGTGACCTTCGAGCTGCGCTGCACCTGTTTGACGAAATGAGGCT TAGAGGCGTCAAGCCAGGGGTCAATTCTTGGAACTGCATCATCTCAGGCTGTGTGCAGAA TGCGAGGTATGACGAGGCTTTGAACATTTTTTGCGAGATGTGCGAGAGCGAGAGTCCTGA TGCAGTGACTGTGGCTAGCATACTCCCTGCTTGCACTGGCTTGATGGCACTGGGCATTGG AAAGCAGCTGCATTCTTATGTTATACGATGCGGAATCAAGTTAAATGTTTACATTGGCTC TTCGTTGATTGGAATGTACTCCGAGTGTGGAGAATTTGGTTATGCGAGAAGCGTGTTTGC AGCCATTGAGGAGAAGAATGCCACTGTGTGGAATGAATTGATTCGGTCATATATCAATGA GGAGAGGATGAATGAGGCTTGGGAGGCTTTTCGCTTGATGAAGGAGAATGGATTGCAGCC TGATACTATCACATATAATAGCTTCATTGCTGCATATGCTAGAGCAGGTCAGAAAGAACA AGCATATACCCTGCTGTCAAACATGGTTGAAATTGGCTTGAAACCTAATGTGGTATCGAT GAATGCGTTAATATCCGGTTTGCATCACCATGGCCGTCATGCAGATGCATTGGAAGCTTT CCGATACATGCAGGTCTCGAGTGATGGAGAAGCAAAAGGCTGGGCATTACCTGGCAATTC AATTCAACCAAATGGTACAACCATTACTAGTGTCCTCTCCCTTTTGACAGATCTCAGGTT AGATCGTCTTGGGAAGGAAGTACACTGTTATGCTTTTCGGAGTGGTTTGATATCAAACAT ATTTGTTTCTAGCAAACTGGTTGACCTTTATGGTAAGACTGGTGATGTGGGCACCGCTGA TAAAGTCTTCCGGAGAATCAGTAACAAGAATGTTGTCACATGGAACAGTATACTAGCATC CTACAGGCAAAATAGGAAGCCAGAAATTGCTTTGAAACTGTTCCATGAAATGATCAAATC CAATTTACTTCCCAACTTAGTTACATTACAGATTGCTCTTTTGTCTTCTGGTATGACTAT GGCATTGCAGCATGGGAGAGAATTGCATGGTTACATTAGGAAGAACTGGCCAGATGGTTA TCCAACTGCTCTTGCAAGTGCTTTGATTGATATGTACGGGAAATGTGGTAAGATTGAGGA TGCTAGATTGGTTTTCGAATGCACTGATGAAAAGGACATAGCAACATGGAATGCAATAAT GAGTGCATACTTGCTACATAGGATACCTGGAGAGGTTAAAAAATTGTTCAAGTATATTGA ACAATCTGGAATTCAACCAGATCCTGTGACTTTCATTATACTTCTTTCAGCTTGTAAGCA AGAAGGTTCCATGGAGGAAGCTCGCAGATATTTCTACAGTATGGAAGATGTATACGGCAT ACAACCAACCTTAAAACACTATACCTGCATGGTTGACATCATGGGAATGGCTGGCTTACT GGAGGAGTCACTAGAACTTATCCAGAAGATGCAACTTGAACCAGATGGATGCCTATGGTC TATCCTTCTGAAAGCTTGTAAGCTGCACTCAAATCTGGAGATCGGTGAGAAGGCTGCGAA AGCGCTTTTTGAGCTTGAGCCAAACAATACTTCAAATTACATGTCGCTGTCCAATATATA TGCCGACAATGGCTTGTGGGAGTCCACTGAGGCTTTGAGGGTTGCCATGACAGAACAGGG GTTAAATGTAGAGAGACAATGTAGCCGCTTGTATCTTGGTACAGATGTACACACATTTGA GGCTGGAGATTCCTCGCATCCTGCATTCGAAAAGATTTTGAGTACATGGAATGACTTATC TGATAGGATGGAACAGTCAGGGTATCCTCCTCAGGATATTGAGCCCTATTCTAATGCCGA AGCTGATCCATTGTCATGCCAACACACCGAGAGGATTGCATTATGTTACGGGCTAATTTC CGTGCGTGTTCATGATCTGATCCGTATCTCAAAGAATTTTAGGATGTGCATGGAATGCCA TTCATCAATCAAGTTCATCTCGAGGGATATGAACCGGGAAATATTTGTTTCAGATGGTTG CACCTATCACCATTTTCAGAATGGAGCATGCAGCTGTGGAGATATGTGGTAAATTGAAGT CAGTTTGACACAAAAGTACTCTTCTTGTATGGTCAAAACTGCATTTATCTACCCAAATAT TGCCGGGCCGGCCAAGAAATGCCAACCAAATTTACTTAAGATTGAAGAATATATACAAAT ATACAAAGTTATAACTTCAACAAGAAGCTGTCGAAGTAATGGAAGTTGTCACCGGAGCAA CTTACCAAAAGCAAAAGATTACACTAAGAGACTACTCTCCTATATTTCTGAAAACCCCAG CTTCCTTCCAAATCGTCACTTCCTCTTTGATTGAACCAAACAGGAAACCGGCTGAGCGCC GCTGGTTCTGAAACACACGCGCATTTCTTTTCTTCCAAACCATCCAACAAACAAGCAGCA CAAGGCTGTCAATGGCGTCCTTGTAGTTGTTCCGAAAATTTTGCCGCATCGCTAACCACC ATTCGCCAACCAATATATACTATCTTATGAGTCCAAGCCTGACTCAGATGGCAGCAGGAA GCCAACCCCAAATATCTTATGATGGTTACAAGAGACTGTACAGCAACCAAGTTAAGTTCT TTCCCATAACCTTCTTGAAGCACTCCATGATCTCTTATATATACCATGATCGATGTGCTT CATGGGAAACTGGGAGCTCTGAGTTCTTGCAAAGATCAGATGGAGAAGGTGCACCTCTGG TCAGAATTAATCGGAAGAAAAGGTTGGTCTGGATGTGGCAGCTTGTGCTGACGCCATTTC AAGAAAAGTGATATGAATTATGCACATATCCTATAAAACATGCGCATGGATTATACGTGG ATATGGTGAGATCAGTAATGCTCTTCAGCTAATGATTTTCAGGCAGCTGGTAACCCCGGG TATGATTACAGGTAACCTAACCTCGTGATTGTCATGTATGCATCTGTGTCTGATATACGG TTGTACTTCAACTTC