Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0477000-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:17778502:17793323:1 gene:Os10g0477000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os10t0477000-01)
Sequence	ATGCAGGGGTTCCCCGGCGGCGCCCCCGATCCGCAGCAGCTGCAGTCCACCATGCTGGCC ATCGAGCAGGCCTGCTCCCTCATCCAGATGCACATGAGTCCAGCTGATGCGGAAAAAGTT ATAAGTTCACTGCATTCATCTCCAATGCCTTATCAAGCATGCAGATTTATTCTTGAGACA TCCCACATGCCAAATGCGAGATTCCAAGCTGCTGGAGCAATTGGTGATGCAGCAATAAGG GAGTGGGGAATCCTTTCAGATGACAACAAAAAAAGCCTAATAGTATATTGCTTGAACTAT GTTATGGAGCATGCAAGTTCCCCGGAAGGTTATGTGCAAGCAAAAGTTTCTGCCGTGGCA GCTAGACTACTCAAAAGAGGCTGGGTTGAGTTTTCAGACCAAGAAAAAGCTGCCATCTTC TTTGAGATTGAGCAATGCGTACGAGGCATCCATGGACCTAATCGACAATTTGCTACCATC AATTTCTTAGAAGCCTTGGTTTCGGAGTTTTCCCCTGGGACTGCTTCTGCTATGTGCCTG CCTAAGGAATTCCATGAGCAATGCCAATGGTCACTTGAAGTGAAGTTTCTGAAGGACTTC TATTGCTGGGCACAAGCTGCTGTGTTCAATTCTGCAGACAGGATATTGAATGTAAATGCA AGTGTAGCAGAGGAGAAAGCATGCTCAGCAGCATTTCGCCTTATGTTCCAGATATTAAGC TGGAGTTTCAAGCACAATGTGGAGCATGCAAATTCAGAAGCTAAGATAAATTCTGGTTTG AGGAGTGATGCCATAAATCTGAAGAAATTTGAGCGTTCGCTGGTGAAGCCAGGGTCTGTG TGGAGTGATGTTCTAATATCAAGTGGGCATGTTCAGTGGGTTTTGAACTTTTATACTGCT GCCCGCCAGAAGTTCTCATATGATACGCTATGGGTTGATTCTCCTATTGCTACCTCCTGC AGACAGCTCATAGTGCAGCTATGCTCGTTGACAGGCTCTGTGTTTCCTAATGATAACGCA GATGGACAGATTCAATACCTTGTGCGCATATTATCTGCTGTTGTACATTGGATTGAACCT CCTGATGTCATTGCTGCATCAATTCGAAGTGGAGCAAGTGAAAGTGAGTTTGTAGATGGA TGCCATGCCCTTCTTTCAATGGCGTCTTTGACTACTTGTTCGCTTTTTGACAACCTCCTG AAGTCAACGAGGAACTATGGCACAATCAACCTACTTTCTGCTTTGACATCCGAAGCTGTC AAGTCTTTTCTGGATAACCAGAATGAAGAAGAAACCTGGGGCTCGGAGTCTCTTGATATA TTGTTAGAAACATGGAATGTTATTCTGGGGGATGTTGATTCCGAGAAAAGTCCTATGTCA GTTGATGGAGCAATTGCTGCTTCAAGTTTGTTTAAGATCATCGTGGAGTCACATTTGAAG GCTGCTGCTGATTCTGCATTCGAGGATACTGATGATGCCGAATACTTTCATGTTTCTGTT TCAAAGCGTGATGAGCAGCTGGCCTTGTATGCTCAGATTGCACGTTCAGCTGCTGACACA ACTATACCCTTTCTTGCACAATTGTTTTCAGAGCGATTTGCACGGCTGAGTCAGAGAAAT GGTGAAAATGATCCTACTCAGACTTTAGAAGAGTTGTACTGGCTGTTGCTGATAACCAGT CATGTCCTAACAGATTCAGGCGAAGGAGAAACACTGCTTATACCAGAAGCATTGCAGGTT GGATTCCCCTATGTAGTTGAAGTAGCACAGCATCCTGTAGTTGCACTCTCATGGTCCATA ATAAATTTTTCTCGACAGTGTCTAGATCCAGGAATCAGGGCAAGGTACTTCAGTCCGCGA CTCATGGAGGCTGTGATTTGGTTCTTGGCCAGATGGGTCGCAACCTATTTAGTACCACTT GATGTGAGTAGGGGGCAAGTAAACAGAGCAGAAATTGACAGTGTGGATAAACACATGCTC CAACATTCTAGAAAAATGCTAAACAGTTTTGCTTGGGAGAATAACCAAGGAGAGCGTGTT CTTGATTTTGTTGTTCTTATTTCAATGGTAGCACTTACTACATATCAGGGAGAAATTGAG CTGCAGACACTTACATGCCAGAAGCTACTTGCTACAGTTGTTCGACGGAAGCACACATGT ACTTATGTTGTTCAGTTGGACTCGTGGCGTGATCTTACAAGAGCTTTTGCAAGTGGACGT TCTTTATTTTCATTAACTGGACGCTTACAGAGATCTCTAGCAGAAACACTTGCCTGTGCA GCTTCCTGCATCAAAGATCCTGAAGCATCTGTGCAGTATTTGAGGGACCTCATGGGACCG GTTGCTGGATGCCTAGTAGAGAATGCTAACAGGAGTGATCTCAAATCTGTGGCACAGCAA GCAGATGTTGTTTATATGGTCTGTTGTCTATTGGAACGACTAAGAGGAGCTGCTAGAGCT ACCCAGCCTCGCACTCAAAAGGTTCTATTTGAGATGGGTCACACTGTGATGAACTCGCTC TTGACTCTTCTGGAGGTGTACAAAAATCAGTCTGCAGTCATATACATGATACTCAAGTTC GTCGTTGATTTTGTTGATGGTCAAGCTGTGTTTTTGGATGCTAAGGAAACATCAGTTTTG GTGAGCTTTTGCCTGAAACTACTCCAAATATACTCCTCTCATAATATTGGAAAGGTAATG CTCTCACTTTCTTCAAGTTTGCGCAGTGAGTCACAAGCTGAAAAATATAAGGATCTACGT GCTTTGCTTCGTCTTCTGACTAATATATGCTCAAAGGATTTGGTTGGTTTCCTATCTGAT AGTAGCATTGAAGGTTCACAAGATATTGCTGAGGTCATCTATGTTGGAGTTGATATTGTG ACTCCCTTGATATCTTTGGACCTTCTGAAGTACCCTAAACTCAGTCGTGATTATTTTGCT CTTATCTCTCATTTGCTGGAAGTGTACCCGGAGAAGGTTGCTAACTTAAATAAGGTTGCC TTTGCAAGAATTATTGGAAGTCTTGAGTTTGGCCTGCGTAATCAGGATTGCGACATTGTC GACAGGTGCCTTACAGCAATAAATGCTCTCGCTTCTTACCATTTCAAAGAGAGACTTGGA GGTAGGGGAGGACTTAGCTCACAGCTTATGGAATCAGAAGGATCAAATGGCAAACTTCAG GAAAGCATATCAAGTCACTTTTTGAGGCTGCTTCTGCAATTGCTTCTGTTCGAAGATTTC AGAATGGAACTAGCAGGTTCTGCTGCAGATGCTTTGCTTCCTTTGATTTTATGTGAACAA CCGTTATATCAGAGGCTGCTGCAGGAGTTAGTTGAGAAACAACAGAATCCAACAGTGAAA TCAAGGCTGGGAATGGCATTTCATAACCTCACAAGCTCCAACAATCTCTCCAACTCGCTC GACCGCCCAAATAGGCAGAGATTCAGGAAAAACCTCCGCACTTTCTTGGGCGATGTCTCG GGCTTCATGCAGATAAAATAG

Peptide Sequence

PEP ID	Os10t0477000-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:17778502:17793323:1 gene:Os10g0477000 transcript:Os10t0477000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os10t0477000-01)
Sequence	MQGFPGGAPDPQQLQSTMLAIEQACSLIQMHMSPADAEKVISSLHSSPMPYQACRFILET SHMPNARFQAAGAIGDAAIREWGILSDDNKKSLIVYCLNYVMEHASSPEGYVQAKVSAVA ARLLKRGWVEFSDQEKAAIFFEIEQCVRGIHGPNRQFATINFLEALVSEFSPGTASAMCL PKEFHEQCQWSLEVKFLKDFYCWAQAAVFNSADRILNVNASVAEEKACSAAFRLMFQILS WSFKHNVEHANSEAKINSGLRSDAINLKKFERSLVKPGSVWSDVLISSGHVQWVLNFYTA ARQKFSYDTLWVDSPIATSCRQLIVQLCSLTGSVFPNDNADGQIQYLVRILSAVVHWIEP PDVIAASIRSGASESEFVDGCHALLSMASLTTCSLFDNLLKSTRNYGTINLLSALTSEAV KSFLDNQNEEETWGSESLDILLETWNVILGDVDSEKSPMSVDGAIAASSLFKIIVESHLK AAADSAFEDTDDAEYFHVSVSKRDEQLALYAQIARSAADTTIPFLAQLFSERFARLSQRN GENDPTQTLEELYWLLLITSHVLTDSGEGETLLIPEALQVGFPYVVEVAQHPVVALSWSI INFSRQCLDPGIRARYFSPRLMEAVIWFLARWVATYLVPLDVSRGQVNRAEIDSVDKHML QHSRKMLNSFAWENNQGERVLDFVVLISMVALTTYQGEIELQTLTCQKLLATVVRRKHTC TYVVQLDSWRDLTRAFASGRSLFSLTGRLQRSLAETLACAASCIKDPEASVQYLRDLMGP VAGCLVENANRSDLKSVAQQADVVYMVCCLLERLRGAARATQPRTQKVLFEMGHTVMNSL LTLLEVYKNQSAVIYMILKFVVDFVDGQAVFLDAKETSVLVSFCLKLLQIYSSHNIGKVM LSLSSSLRSESQAEKYKDLRALLRLLTNICSKDLVGFLSDSSIEGSQDIAEVIYVGVDIV TPLISLDLLKYPKLSRDYFALISHLLEVYPEKVANLNKVAFARIIGSLEFGLRNQDCDIV DRCLTAINALASYHFKERLGGRGGLSSQLMESEGSNGKLQESISSHFLRLLLQLLLFEDF RMELAGSAADALLPLILCEQPLYQRLLQELVEKQQNPTVKSRLGMAFHNLTSSNNLSNSL DRPNRQRFRKNLRTFLGDVSGFMQIK

Transcript Sequence

Transcript ID	Os10t0477000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:17778502:17793323:1 gene:Os10g0477000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os10t0477000-01)
Sequence	CGCCGCCACCTCGCTCCCATCGCTGCCTCCTCCTCTGCTTCGTCGCCGCGGCGGCATCTC GCCGGCGGCGATCGGCGTGACCCCGAGCGCCCGCAACACGCCAGGCGCGATCGGAAGCGG AAGCGCCCCCCTCCGCCGCCGCCGCCGCAGCCACCATGCAGGGGTTCCCCGGCGGCGCCC CCGATCCGCAGCAGCTGCAGTCCACCATGCTGGCCATCGAGCAGGCCTGCTCCCTCATCC AGATGCACATGAGTCCAGCTGATGCGGAAAAAGTTATAAGTTCACTGCATTCATCTCCAA TGCCTTATCAAGCATGCAGATTTATTCTTGAGACATCCCACATGCCAAATGCGAGATTCC AAGCTGCTGGAGCAATTGGTGATGCAGCAATAAGGGAGTGGGGAATCCTTTCAGATGACA ACAAAAAAAGCCTAATAGTATATTGCTTGAACTATGTTATGGAGCATGCAAGTTCCCCGG AAGGTTATGTGCAAGCAAAAGTTTCTGCCGTGGCAGCTAGACTACTCAAAAGAGGCTGGG TTGAGTTTTCAGACCAAGAAAAAGCTGCCATCTTCTTTGAGATTGAGCAATGCGTACGAG GCATCCATGGACCTAATCGACAATTTGCTACCATCAATTTCTTAGAAGCCTTGGTTTCGG AGTTTTCCCCTGGGACTGCTTCTGCTATGTGCCTGCCTAAGGAATTCCATGAGCAATGCC AATGGTCACTTGAAGTGAAGTTTCTGAAGGACTTCTATTGCTGGGCACAAGCTGCTGTGT TCAATTCTGCAGACAGGATATTGAATGTAAATGCAAGTGTAGCAGAGGAGAAAGCATGCT CAGCAGCATTTCGCCTTATGTTCCAGATATTAAGCTGGAGTTTCAAGCACAATGTGGAGC ATGCAAATTCAGAAGCTAAGATAAATTCTGGTTTGAGGAGTGATGCCATAAATCTGAAGA AATTTGAGCGTTCGCTGGTGAAGCCAGGGTCTGTGTGGAGTGATGTTCTAATATCAAGTG GGCATGTTCAGTGGGTTTTGAACTTTTATACTGCTGCCCGCCAGAAGTTCTCATATGATA CGCTATGGGTTGATTCTCCTATTGCTACCTCCTGCAGACAGCTCATAGTGCAGCTATGCT CGTTGACAGGCTCTGTGTTTCCTAATGATAACGCAGATGGACAGATTCAATACCTTGTGC GCATATTATCTGCTGTTGTACATTGGATTGAACCTCCTGATGTCATTGCTGCATCAATTC GAAGTGGAGCAAGTGAAAGTGAGTTTGTAGATGGATGCCATGCCCTTCTTTCAATGGCGT CTTTGACTACTTGTTCGCTTTTTGACAACCTCCTGAAGTCAACGAGGAACTATGGCACAA TCAACCTACTTTCTGCTTTGACATCCGAAGCTGTCAAGTCTTTTCTGGATAACCAGAATG AAGAAGAAACCTGGGGCTCGGAGTCTCTTGATATATTGTTAGAAACATGGAATGTTATTC TGGGGGATGTTGATTCCGAGAAAAGTCCTATGTCAGTTGATGGAGCAATTGCTGCTTCAA GTTTGTTTAAGATCATCGTGGAGTCACATTTGAAGGCTGCTGCTGATTCTGCATTCGAGG ATACTGATGATGCCGAATACTTTCATGTTTCTGTTTCAAAGCGTGATGAGCAGCTGGCCT TGTATGCTCAGATTGCACGTTCAGCTGCTGACACAACTATACCCTTTCTTGCACAATTGT TTTCAGAGCGATTTGCACGGCTGAGTCAGAGAAATGGTGAAAATGATCCTACTCAGACTT TAGAAGAGTTGTACTGGCTGTTGCTGATAACCAGTCATGTCCTAACAGATTCAGGCGAAG GAGAAACACTGCTTATACCAGAAGCATTGCAGGTTGGATTCCCCTATGTAGTTGAAGTAG CACAGCATCCTGTAGTTGCACTCTCATGGTCCATAATAAATTTTTCTCGACAGTGTCTAG ATCCAGGAATCAGGGCAAGGTACTTCAGTCCGCGACTCATGGAGGCTGTGATTTGGTTCT TGGCCAGATGGGTCGCAACCTATTTAGTACCACTTGATGTGAGTAGGGGGCAAGTAAACA GAGCAGAAATTGACAGTGTGGATAAACACATGCTCCAACATTCTAGAAAAATGCTAAACA GTTTTGCTTGGGAGAATAACCAAGGAGAGCGTGTTCTTGATTTTGTTGTTCTTATTTCAA TGGTAGCACTTACTACATATCAGGGAGAAATTGAGCTGCAGACACTTACATGCCAGAAGC TACTTGCTACAGTTGTTCGACGGAAGCACACATGTACTTATGTTGTTCAGTTGGACTCGT GGCGTGATCTTACAAGAGCTTTTGCAAGTGGACGTTCTTTATTTTCATTAACTGGACGCT TACAGAGATCTCTAGCAGAAACACTTGCCTGTGCAGCTTCCTGCATCAAAGATCCTGAAG CATCTGTGCAGTATTTGAGGGACCTCATGGGACCGGTTGCTGGATGCCTAGTAGAGAATG CTAACAGGAGTGATCTCAAATCTGTGGCACAGCAAGCAGATGTTGTTTATATGGTCTGTT GTCTATTGGAACGACTAAGAGGAGCTGCTAGAGCTACCCAGCCTCGCACTCAAAAGGTTC TATTTGAGATGGGTCACACTGTGATGAACTCGCTCTTGACTCTTCTGGAGGTGTACAAAA ATCAGTCTGCAGTCATATACATGATACTCAAGTTCGTCGTTGATTTTGTTGATGGTCAAG CTGTGTTTTTGGATGCTAAGGAAACATCAGTTTTGGTGAGCTTTTGCCTGAAACTACTCC AAATATACTCCTCTCATAATATTGGAAAGGTAATGCTCTCACTTTCTTCAAGTTTGCGCA GTGAGTCACAAGCTGAAAAATATAAGGATCTACGTGCTTTGCTTCGTCTTCTGACTAATA TATGCTCAAAGGATTTGGTTGGTTTCCTATCTGATAGTAGCATTGAAGGTTCACAAGATA TTGCTGAGGTCATCTATGTTGGAGTTGATATTGTGACTCCCTTGATATCTTTGGACCTTC TGAAGTACCCTAAACTCAGTCGTGATTATTTTGCTCTTATCTCTCATTTGCTGGAAGTGT ACCCGGAGAAGGTTGCTAACTTAAATAAGGTTGCCTTTGCAAGAATTATTGGAAGTCTTG AGTTTGGCCTGCGTAATCAGGATTGCGACATTGTCGACAGGTGCCTTACAGCAATAAATG CTCTCGCTTCTTACCATTTCAAAGAGAGACTTGGAGGTAGGGGAGGACTTAGCTCACAGC TTATGGAATCAGAAGGATCAAATGGCAAACTTCAGGAAAGCATATCAAGTCACTTTTTGA GGCTGCTTCTGCAATTGCTTCTGTTCGAAGATTTCAGAATGGAACTAGCAGGTTCTGCTG CAGATGCTTTGCTTCCTTTGATTTTATGTGAACAACCGTTATATCAGAGGCTGCTGCAGG AGTTAGTTGAGAAACAACAGAATCCAACAGTGAAATCAAGGCTGGGAATGGCATTTCATA ACCTCACAAGCTCCAACAATCTCTCCAACTCGCTCGACCGCCCAAATAGGCAGAGATTCA GGAAAAACCTCCGCACTTTCTTGGGCGATGTCTCGGGCTTCATGCAGATAAAATAGACGT GACAACATGATACCAGTGTTCACTGATCGGTCACTGAAACCACAGAAGATCTACCCCCCG TTGTGCCAGGAGCGCATGTGTGAATGATGCGATGCGAGTCGTGAGCAAGAATGTTTGACA TCACAAGGAACACTCTCTCCAGTCGATGACAAAAGGGTTGCTTCTCCAGGAAGGACAGGG ATATCTTTTGTGTGTGTCACAGGAATATCTCCACATTTGTCACGCTGGTGACAACCGGAT GCCATGTCCACACACAATGAGACGTCATGTAAATGGTTTTCGTTTCGGTTAAACATGCTA GGGCACCATACACATCAAGGTAGTAGTAGGGATTTTGTTGCGACATGTCACCCACATTTT TGCTCAGCCTATGATCAGTGTAGGAATTAAAGATAGGAGTCGCTTTAGCCTTTAGCATCC ACTTGCTGGTGTCAACTGTACCCATCATACTGTACTTAAACCATTATCCTCTCTCTGCAT TGGTGAGAGAGAGAGAGAGCACACAAAGCTTCAGGTTTCTTGCTGT