Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0476900-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:17773251:17776920:-1 gene:Os10g0476900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os10t0476900-01)
Sequence	CTTCGTCTTCTTGCTGATGCTGCACCCTCTGATCTGTGCAGGGGGTGGTGGTGGAATCCT GTCAAGAACCGGGGTTGTTGGGAATTTGGGAATTTAGGGCTCTGCAATTTGGAGGAAGGT GAGGCGATTTTTTTTATCTGCGGGGAATTTCTGCAGTGGGGGTGGTTAGATTGTGCTGTC AATGGTGGTGGTGGTGGTGGTTCGATGAACATGGCGCGTTCGGGTGACGTCAGCCGCTGC CACCGGTGTGGCCTGTGGTCGAATGGCTCTGCGCCGATCACCGTAAGCGCCTCGATTACG ATGCGGTCTTCGCGGGTTACAGCGCACGCCGTGTATCTGGATTATCCTACCAGAACCGAG CAGAAGAATGGGGGTAATTTGGTGGTGATGCGGCCTGACCGACGACGGCCTAGGGATGAT TTCTTCAAGGGTGAGGGTGGTGGTGGTAGTCTTGTAGTTGTGCAGCCAGACCGAGACCGA CGGCCGCAGGATGATTTTGGGAGGGCGGCCGCAGATTCTGAGAAGGATGTATCACCCATC CATGCTAAGCCGAGGAAGCCATTGGACCAGAACCCCGAGGGAATGGATGTGGCAGGTTTC TCAAAACATGGAGGAAAGTGCTATGCTGACAACCTTCGCAGGTACTGTAACAGCGGGAAG CTCATCCAGGCCTGCTGTGTGATTGATGAGATGGTGCTCCATGGCCAGATTCCGGAGACT AAGTGCTGCGTTAGGATAATCCGCGGGCTCGTTAAAACCGGCAAGGCAAACAAAGCTAGG CATGTTCTTGAGGTTATGGTGCTTTCGGGTGGGGTTCCGGACACCATCAGCTGCAACATG TTGATCGCGCAGCTTTGCCGTGGTGGGCAGCTGAGCTCAGCACTGCAGGTTCTGGAAGAC ATGAGATTCAGTGGTTGCTCTCCGAGCGGCATCACTTTTAACACTTTGATTAGGTGCATG TTCAATCAGCGTATGTATGACAGGGCGATCTCCTTTTGGAAAGAACAGTTGAGGTTAGGT TGGCCACCATATGAGATGACAAGCACCTTGCTTGTTGATCTTGTTTGCAAGAATTGTGGC CCTCAGAAGGCCTTGGAAGTCTTGGATGAACTTTCTTTGGAAGGATGTCAACCAGATGTC GTCACCTATAATGCTCTCATCAGTGCATCATGCAAGGCTGGCAGGCTGAATGATGCAAAG TTCATCTTAACTCGTCTTGCTGCTGAAGGGCTTGAACCAAATGGTACAACCTACTGCATC TTACTCCATGCCCTCTGCAACATGAGAAGGTGGGATGAAGTATGCGATTTGCTTGAAGAC ATGAACCAGGTGAATCGTGATCCTGATGTTACAACCTACAATATTTTTATCAATTACTTT TGTAAGTATGGGCATCTGGATCAGGCAATTGATGTGTTGGAGAGGATGGTTATCAACAAT TGTTCTCCTGATATTGTGACCTGCAACACACTCCTGAATGCCATCTCCAAAAAGGGTATG GTTGAGGAAGCTCTTGGGATTGCTCGCTGCATCAGAGAAAACGGATACAAGTTGGTTCTC ATCACATACAATACCCTCATAGATGCTTTAGCAAAGAAGGCTGAAGTTAAGAAAGCTATG GTTCTGTTTGATGAGATGCTTAGTGACGGGATCAGCCCCGATGACATCACATATGGTTCA CTTGTCATGGGTTTTTGTAAGAAAGACATGGCTGATGAGGCCCTGGACCTTTTAAATCAG ATGCTCACTCTAGGCTTTGAAGTTAAAACAACTACCTTTGTCATGGTGATCCAGGCATTA TGTAGAGATGGTAAAGTGGAAGCTGCTGCTGAAATAACTAAAGTAATGTTATCAAAAAAT AGTATCCCCGGGAATTCATTGTGTTCATCCATAGTCACAAAAGTTGCCAAATCAGGCTGG AATAAAGAGGCACAGATGCTCCACCAGAAGTTAGTTGAGTGTGAGATCCTTAAAGAAGAT GCTGAAGTTATTTTAAGCAGCTAG

Peptide Sequence

PEP ID	Os10t0476900-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:17773251:17776920:-1 gene:Os10g0476900 transcript:Os10t0476900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os10t0476900-01)
Sequence	LRLLADAAPSDLCRGWWWNPVKNRGCWEFGNLGLCNLEEGEAIFFICGEFLQWGWLDCAV NGGGGGGSMNMARSGDVSRCHRCGLWSNGSAPITVSASITMRSSRVTAHAVYLDYPTRTE QKNGGNLVVMRPDRRRPRDDFFKGEGGGGSLVVVQPDRDRRPQDDFGRAAADSEKDVSPI HAKPRKPLDQNPEGMDVAGFSKHGGKCYADNLRRYCNSGKLIQACCVIDEMVLHGQIPET KCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPDTISCNMLIAQLCRGGQLSSALQVLED MRFSGCSPSGITFNTLIRCMFNQRMYDRAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCG PQKALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCI LLHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFINYFCKYGHLDQAIDVLERMVINN CSPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAM VLFDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQMLTLGFEVKTTTFVMVIQAL CRDGKVEAAAEITKVMLSKNSIPGNSLCSSIVTKVAKSGWNKEAQMLHQKLVECEILKED AEVILSS

Transcript Sequence

Transcript ID	Os10t0476900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:17773251:17776920:-1 gene:Os10g0476900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os10t0476900-01)
Sequence	ACTCTCTCTCCCTCTCCCTCTCTCTCTCTCTCTCTAGCCTCCGCCTCGCCGCGCCTCGCC GCCGCTAGGGGGAGAAGCGGTGGCGGAGAGGGCCGCGTCCTCCTCCATTCCGCAGGTACA CCCTCTCTCTCCATCTCTGCTAGCGGCTAGCTTCGTCTTCTTGCTGATGCTGCACCCTCT GATCTGTGCAGGGGGTGGTGGTGGAATCCTGTCAAGAACCGGGGTTGTTGGGAATTTGGG AATTTAGGGCTCTGCAATTTGGAGGAAGGTGAGGCGATTTTTTTTATCTGCGGGGAATTT CTGCAGTGGGGGTGGTTAGATTGTGCTGTCAATGGTGGTGGTGGTGGTGGTTCGATGAAC ATGGCGCGTTCGGGTGACGTCAGCCGCTGCCACCGGTGTGGCCTGTGGTCGAATGGCTCT GCGCCGATCACCGTAAGCGCCTCGATTACGATGCGGTCTTCGCGGGTTACAGCGCACGCC GTGTATCTGGATTATCCTACCAGAACCGAGCAGAAGAATGGGGGTAATTTGGTGGTGATG CGGCCTGACCGACGACGGCCTAGGGATGATTTCTTCAAGGGTGAGGGTGGTGGTGGTAGT CTTGTAGTTGTGCAGCCAGACCGAGACCGACGGCCGCAGGATGATTTTGGGAGGGCGGCC GCAGATTCTGAGAAGGATGTATCACCCATCCATGCTAAGCCGAGGAAGCCATTGGACCAG AACCCCGAGGGAATGGATGTGGCAGGTTTCTCAAAACATGGAGGAAAGTGCTATGCTGAC AACCTTCGCAGGTACTGTAACAGCGGGAAGCTCATCCAGGCCTGCTGTGTGATTGATGAG ATGGTGCTCCATGGCCAGATTCCGGAGACTAAGTGCTGCGTTAGGATAATCCGCGGGCTC GTTAAAACCGGCAAGGCAAACAAAGCTAGGCATGTTCTTGAGGTTATGGTGCTTTCGGGT GGGGTTCCGGACACCATCAGCTGCAACATGTTGATCGCGCAGCTTTGCCGTGGTGGGCAG CTGAGCTCAGCACTGCAGGTTCTGGAAGACATGAGATTCAGTGGTTGCTCTCCGAGCGGC ATCACTTTTAACACTTTGATTAGGTGCATGTTCAATCAGCGTATGTATGACAGGGCGATC TCCTTTTGGAAAGAACAGTTGAGGTTAGGTTGGCCACCATATGAGATGACAAGCACCTTG CTTGTTGATCTTGTTTGCAAGAATTGTGGCCCTCAGAAGGCCTTGGAAGTCTTGGATGAA CTTTCTTTGGAAGGATGTCAACCAGATGTCGTCACCTATAATGCTCTCATCAGTGCATCA TGCAAGGCTGGCAGGCTGAATGATGCAAAGTTCATCTTAACTCGTCTTGCTGCTGAAGGG CTTGAACCAAATGGTACAACCTACTGCATCTTACTCCATGCCCTCTGCAACATGAGAAGG TGGGATGAAGTATGCGATTTGCTTGAAGACATGAACCAGGTGAATCGTGATCCTGATGTT ACAACCTACAATATTTTTATCAATTACTTTTGTAAGTATGGGCATCTGGATCAGGCAATT GATGTGTTGGAGAGGATGGTTATCAACAATTGTTCTCCTGATATTGTGACCTGCAACACA CTCCTGAATGCCATCTCCAAAAAGGGTATGGTTGAGGAAGCTCTTGGGATTGCTCGCTGC ATCAGAGAAAACGGATACAAGTTGGTTCTCATCACATACAATACCCTCATAGATGCTTTA GCAAAGAAGGCTGAAGTTAAGAAAGCTATGGTTCTGTTTGATGAGATGCTTAGTGACGGG ATCAGCCCCGATGACATCACATATGGTTCACTTGTCATGGGTTTTTGTAAGAAAGACATG GCTGATGAGGCCCTGGACCTTTTAAATCAGATGCTCACTCTAGGCTTTGAAGTTAAAACA ACTACCTTTGTCATGGTGATCCAGGCATTATGTAGAGATGGTAAAGTGGAAGCTGCTGCT GAAATAACTAAAGTAATGTTATCAAAAAATAGTATCCCCGGGAATTCATTGTGTTCATCC ATAGTCACAAAAGTTGCCAAATCAGGCTGGAATAAAGAGGCACAGATGCTCCACCAGAAG TTAGTTGAGTGTGAGATCCTTAAAGAAGATGCTGAAGTTATTTTAAGCAGCTAGTAGCTG GAGTATAAGATTGTTATTTAGTAGCATGAAACATGCAGCTTCTCAGCTAATCAGCAGATA AATTCTGGAAGTTGTAGATAGTGTCCTGGAAGAGGCATCCTGACGAGTGGGTGAGCCGGT TAACCAAGACTGTACCCCATTGTTGCTAATGAAATGTGACCCTATCTTATAATCTACTAC CTCCGTTTCAGTTTATAAAACTTTCTAGCATTGCCCACATTCATATAGATGTTAATGAAT CTAGGCGCGCGCGCGCGCACACATATATATATATATATATATTCATTAACATATATATAA ATATGGGCAATGCTAAAAAGTCTTATAATATGAAACGGAGGAAGTACTACTTACGCTACT GCGACAAACAAATTAAATCTCAATGGAAGAGGCATTGTGGATGTCACTTCGCATGGCATT ATGGCCCTTGTAACCACATTACGACATCGTCGTTAAGCAGGATAGATTAGCATATTCTGG ATTAGCGGTAGAGTTCCCCTAATGTGTTTAGGTGCAGCTTGATTCTTGAATTCGTAATCT CTCTATTTATTTATTTATATATATAAGTGAAGCTGTTGGTTGC