Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0475900-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:17722467:17724969:1 gene:Os10g0475900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin domain containing protein. (Os10t0475900-01)
Sequence	ATGAAGCGCCGGCCCGCCATGGACTCCCACAACGAGCAGCCGCCGCCGCCGAAGAGCTTA AAGATCTATGTGAAGATGATGAAGACGTTCACCCTCAATGTGAATAGTACTGATACAGTC GATCAGATCAAATCCAAACTCAGTGCTATTGAGGGGATTGACAAGAGCAAGCAAGAGATG TTCTTTGCTGGGATGCACTTGAAGAATGAGGATAAGCTTGCTGATTATAACATCATGACC AACTCTTCTGTTGACCTCTATGTCACTGATGCTATTCAAATATCTGTAAGGATTCCCTCT GTTGGAAAGACCACCAAGCTCAATATGAGGAAATCGAATAGTATTGCTGACATCAAGGCG GAGATTGAACAGGAGGAAGGAATTCTTATGAACGAACAAATCCTGATGTATGCCGGTCAA CAGCTTGAGGACAACCAGTTGTTAAGTCAGTGCGATTTGAGGAATGATCAGACATTTCAT GTTTTGGTTTGCCCAAATGACAAGCTTCATGTCTTTATCAATGTTAGAGGAGAGAAAACT ATAGGCCTTGAAACTAAACGCTGGTACACCGTTGCTGATGTCAAGTTGATGATTGAGAAT TTGGAGGGCTTGCCTGCATGCAGCCAGATACTCACACGGATGCAATCTGGTGTTGGTGTG GCGCTCACAGATGGTCGGATGCTACAGGATCAGCATGTCAAAAACAATGATACTCTCTTG CTGCAGCAGAATGTTCAGTTCTTCGTCAAGTCATGGGAGGGTAAGACCTTAACTATGGTT TTGAAAACGTCCGACACGGGTAAGCAAATCAAGGATAGAATTGCAGAGAAGTTGCGGATC AAAGAAAGTCTGTACTATCTCTGTCACAAGGGACGTGTTCTGTTAACTGAGGATACTCTT CTGGATCATGAGGTCGAGAGTAACTCCACAGTTTACATCCGCCTTCGGAATTCAGCGGTG GTGAAACCAAATGCAAAGAAGCGCTAG

Peptide Sequence

PEP ID	Os10t0475900-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:17722467:17724969:1 gene:Os10g0475900 transcript:Os10t0475900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin domain containing protein. (Os10t0475900-01)
Sequence	MKRRPAMDSHNEQPPPPKSLKIYVKMMKTFTLNVNSTDTVDQIKSKLSAIEGIDKSKQEM FFAGMHLKNEDKLADYNIMTNSSVDLYVTDAIQISVRIPSVGKTTKLNMRKSNSIADIKA EIEQEEGILMNEQILMYAGQQLEDNQLLSQCDLRNDQTFHVLVCPNDKLHVFINVRGEKT IGLETKRWYTVADVKLMIENLEGLPACSQILTRMQSGVGVALTDGRMLQDQHVKNNDTLL LQQNVQFFVKSWEGKTLTMVLKTSDTGKQIKDRIAEKLRIKESLYYLCHKGRVLLTEDTL LDHEVESNSTVYIRLRNSAVVKPNAKKR

Transcript Sequence

Transcript ID	Os10t0475900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:17722467:17724969:1 gene:Os10g0475900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin domain containing protein. (Os10t0475900-01)
Sequence	ACCCTTCCGCGAACCGCGGCGGTGAGAGAGGAAGACGTGGTGGAGTGAGAACTGAGAAGG CGGGGGAGAAGAGCAGCGCCGCCGCCGCCGCCGAGCTCTCCGGCGACGCCAAGTCGAATC GGAGCCCGACGCGGCGGATGAAGCGCCGGCCCGCCATGGACTCCCACAACGAGCAGCCGC CGCCGCCGAAGAGCTTAAAGATCTATGTGAAGATGATGAAGACGTTCACCCTCAATGTGA ATAGTACTGATACAGTCGATCAGATCAAATCCAAACTCAGTGCTATTGAGGGGATTGACA AGAGCAAGCAAGAGATGTTCTTTGCTGGGATGCACTTGAAGAATGAGGATAAGCTTGCTG ATTATAACATCATGACCAACTCTTCTGTTGACCTCTATGTCACTGATGCTATTCAAATAT CTGTAAGGATTCCCTCTGTTGGAAAGACCACCAAGCTCAATATGAGGAAATCGAATAGTA TTGCTGACATCAAGGCGGAGATTGAACAGGAGGAAGGAATTCTTATGAACGAACAAATCC TGATGTATGCCGGTCAACAGCTTGAGGACAACCAGTTGTTAAGTCAGTGCGATTTGAGGA ATGATCAGACATTTCATGTTTTGGTTTGCCCAAATGACAAGCTTCATGTCTTTATCAATG TTAGAGGAGAGAAAACTATAGGCCTTGAAACTAAACGCTGGTACACCGTTGCTGATGTCA AGTTGATGATTGAGAATTTGGAGGGCTTGCCTGCATGCAGCCAGATACTCACACGGATGC AATCTGGTGTTGGTGTGGCGCTCACAGATGGTCGGATGCTACAGGATCAGCATGTCAAAA ACAATGATACTCTCTTGCTGCAGCAGAATGTTCAGTTCTTCGTCAAGTCATGGGAGGGTA AGACCTTAACTATGGTTTTGAAAACGTCCGACACGGGTAAGCAAATCAAGGATAGAATTG CAGAGAAGTTGCGGATCAAAGAAAGTCTGTACTATCTCTGTCACAAGGGACGTGTTCTGT TAACTGAGGATACTCTTCTGGATCATGAGGTCGAGAGTAACTCCACAGTTTACATCCGCC TTCGGAATTCAGCGGTGGTGAAACCAAATGCAAAGAAGCGCTAGGTAGCTACTTCTATGA ACTATCAACTTCCTTAAGGCAAGAGACAAAACATAGTTGCTTAGACGTTAGACCCTCGTA TGGTTAGTTTTTGGTGTTACTAATCCTAGTTCTCTAGCAGTGAACTGGAGGTTTCAGGTT CCTGACTTGTGATGCCTATCTATTAGTAATACTTTTGCTGTAAAAACTTTTGCTTGAACT GAAGGGGAGACACAGAAAGAACTGTGCATATTTCC