Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0474100-00
CDS Infomation	cds chromosome:IRGSP-1.0:10:17619188:17621032:-1 gene:Os10g0474100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GMC oxidoreductase family protein, expressed. (Os10t0474100-00)
Sequence	GTGGACGAGAACTTGGAGAACCCAAGTTGGAAGGCAATCGGGTACAGCGTCCCGGCGGCC GAGGAAGAGCCACAGAAAGAAGAACCTACAGAAGCAACGCCGACGCCGGCGCCGGCGACG GCGCCGCCGTGCCGGCCTCTGGACAATGGCGTCGTGGAGACCAAGCAGCTGGACGACAAC GCCTTGCTCATGTCGCTCGCGGAGAAGGGCCTCGCGCTGAAGACGGGCGCGTCGTCGCCG AGCGCGCACCACCACACGGTGCTGTGCGACGCCGTCGTCGTCGGGTCCGGCTGCGGCGGC GGCGTGGCCGCCGCCGTGCTCGCGTCGGCCGGGTACAAGGTCGTCGTCGTCGAGAAGGGG GACTACTTCGCCGCCAGGGACTACAGCTCGCTGGAGGGCCCGACCATGGAGCGCCTCTAC GAGAATGGCGGCGTGTTCAGCACGGCGAACGTGACGACCACCATGTTCGCCGGCGCGACG GTCGGCGGCGGCTCGGCGGTGAACTGGTCGGCCTGCATCCGCACGCCGGCGAACGTGTTG CAGGAGTGGTCGAACGACCATGGGCTCCCTCTGTTCGGGGGGCAAGGCTACGTGCAGGCC ATGGACGCCGTGTGCGCTCGGCTCGGCGTCACCGGCCGGTGCCGGGAGGAGGGGTTCCAG AACAAGGCGGTGCGCCGCGGCTGCGAGGCGCTTGGGCTGCGCGTCGAGGCCGTGTCGCGC AACTCGTCGGAGGGGCACTTCTGCGGCAGCTGCAACCTCGGGTGCCCCACCGGCGAGAAG CGCGGCACCGACACGACGTGGCTCGTCGACGCCGTCGGCCGCGGCGCCGTCATCCTGACC GGGTGCAAGGCCGAACGGTTCATCCTCGAGACGAACACCGGCGGCGGCGGCGGCCGGCGC AAGAAGTGCGTCGGCGTCGTGGCGAAGTGCTTGGGCAAAGGCATCACCAAGAAGCTCCGG ATCGAGGCGAAGGTGTCCGTCTCGGCGTGCGGCGCGCTCATGACGCCGCCGCTGCTGCGC AACAGCGGGCTCAAGAACCGCCACATCGGCCGGAACCTTCACCTCCACCCGGTGTCCATG GCGTGGGGCTACTTCCCGGACAGCACGGCGGAGCTCCCGGGCAAGTCCTACGAGGGCGGC ATCATCACCAGCATGCACCGCGTCACCGACCGCACCATCATCGAGACGCCGGCGCTCGGC CCGGGCGCGTTCGCCGCCGTGGTGCCGTGGGAGTCCGGCCGCGACATGAAGGAGCGGATG CGGCGGTACGCGCGCACGGCGCACGCGGTGGTGCTCGTCCGCGACCGCGCCGCGGGCACC GTCGGCGGCGAGGGCCGCGTCCGCTTCACCCCGAGCCGCGGCGACGCCGGCGAGCTCCGC GCCGGCCTGCGGCGCGCGCTGCGCATCCTGGTGGCCGCCGGCGCCGCCGAGGTGGGCACG AACCGCAGCGACGGGCTGCGCCTCCGGTGCAAGGGCGCGCGTGACGAGGACGTGGAGGCG TTCCTGGACGAGGTGAGCGTGGAGAAGGGGCCGATGCACCCGGGGTCGGACAAGTGGGCG CTCCTTGCCTCGGCGCACCAGATGGGGAGCTGCCGGATGGGGAGGAGCGCCAAGCACGGC GGCGTCGACGGCGGCGGCGAGAGCTGGGAGGCGGAGGGGCTGTACGTCTGCGACGGCAGC TTGCTCCCGACGGCCGTCGGCGTCAACCCGATGATCACCATCGAGTCCGTGGCGTATTGC GTCGCCAAGGGCATCGCCGAGTCGCTCGCGTCGCGCGCAGCGCGCTCAGTGGAAAACCGT GATGTGTCCACGAACCCTCCTCTAGCTTGTGAATCGTAA

Peptide Sequence

PEP ID	Os10t0474100-00
PEP Infomation	pep chromosome:IRGSP-1.0:10:17619188:17621032:-1 gene:Os10g0474100 transcript:Os10t0474100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GMC oxidoreductase family protein, expressed. (Os10t0474100-00)
Sequence	VDENLENPSWKAIGYSVPAAEEEPQKEEPTEATPTPAPATAPPCRPLDNGVVETKQLDDN ALLMSLAEKGLALKTGASSPSAHHHTVLCDAVVVGSGCGGGVAAAVLASAGYKVVVVEKG DYFAARDYSSLEGPTMERLYENGGVFSTANVTTTMFAGATVGGGSAVNWSACIRTPANVL QEWSNDHGLPLFGGQGYVQAMDAVCARLGVTGRCREEGFQNKAVRRGCEALGLRVEAVSR NSSEGHFCGSCNLGCPTGEKRGTDTTWLVDAVGRGAVILTGCKAERFILETNTGGGGGRR KKCVGVVAKCLGKGITKKLRIEAKVSVSACGALMTPPLLRNSGLKNRHIGRNLHLHPVSM AWGYFPDSTAELPGKSYEGGIITSMHRVTDRTIIETPALGPGAFAAVVPWESGRDMKERM RRYARTAHAVVLVRDRAAGTVGGEGRVRFTPSRGDAGELRAGLRRALRILVAAGAAEVGT NRSDGLRLRCKGARDEDVEAFLDEVSVEKGPMHPGSDKWALLASAHQMGSCRMGRSAKHG GVDGGGESWEAEGLYVCDGSLLPTAVGVNPMITIESVAYCVAKGIAESLASRAARSVENR DVSTNPPLACES

Transcript Sequence

Transcript ID	Os10t0474100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:17619188:17621032:-1 gene:Os10g0474100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GMC oxidoreductase family protein, expressed. (Os10t0474100-00)
Sequence	ATGTAGGTGGACGAGAACTTGGAGAACCCAAGTTGGAAGGCAATCGGGTACAGCGTCCCG GCGGCCGAGGAAGAGCCACAGAAAGAAGAACCTACAGAAGCAACGCCGACGCCGGCGCCG GCGACGGCGCCGCCGTGCCGGCCTCTGGACAATGGCGTCGTGGAGACCAAGCAGCTGGAC GACAACGCCTTGCTCATGTCGCTCGCGGAGAAGGGCCTCGCGCTGAAGACGGGCGCGTCG TCGCCGAGCGCGCACCACCACACGGTGCTGTGCGACGCCGTCGTCGTCGGGTCCGGCTGC GGCGGCGGCGTGGCCGCCGCCGTGCTCGCGTCGGCCGGGTACAAGGTCGTCGTCGTCGAG AAGGGGGACTACTTCGCCGCCAGGGACTACAGCTCGCTGGAGGGCCCGACCATGGAGCGC CTCTACGAGAATGGCGGCGTGTTCAGCACGGCGAACGTGACGACCACCATGTTCGCCGGC GCGACGGTCGGCGGCGGCTCGGCGGTGAACTGGTCGGCCTGCATCCGCACGCCGGCGAAC GTGTTGCAGGAGTGGTCGAACGACCATGGGCTCCCTCTGTTCGGGGGGCAAGGCTACGTG CAGGCCATGGACGCCGTGTGCGCTCGGCTCGGCGTCACCGGCCGGTGCCGGGAGGAGGGG TTCCAGAACAAGGCGGTGCGCCGCGGCTGCGAGGCGCTTGGGCTGCGCGTCGAGGCCGTG TCGCGCAACTCGTCGGAGGGGCACTTCTGCGGCAGCTGCAACCTCGGGTGCCCCACCGGC GAGAAGCGCGGCACCGACACGACGTGGCTCGTCGACGCCGTCGGCCGCGGCGCCGTCATC CTGACCGGGTGCAAGGCCGAACGGTTCATCCTCGAGACGAACACCGGCGGCGGCGGCGGC CGGCGCAAGAAGTGCGTCGGCGTCGTGGCGAAGTGCTTGGGCAAAGGCATCACCAAGAAG CTCCGGATCGAGGCGAAGGTGTCCGTCTCGGCGTGCGGCGCGCTCATGACGCCGCCGCTG CTGCGCAACAGCGGGCTCAAGAACCGCCACATCGGCCGGAACCTTCACCTCCACCCGGTG TCCATGGCGTGGGGCTACTTCCCGGACAGCACGGCGGAGCTCCCGGGCAAGTCCTACGAG GGCGGCATCATCACCAGCATGCACCGCGTCACCGACCGCACCATCATCGAGACGCCGGCG CTCGGCCCGGGCGCGTTCGCCGCCGTGGTGCCGTGGGAGTCCGGCCGCGACATGAAGGAG CGGATGCGGCGGTACGCGCGCACGGCGCACGCGGTGGTGCTCGTCCGCGACCGCGCCGCG GGCACCGTCGGCGGCGAGGGCCGCGTCCGCTTCACCCCGAGCCGCGGCGACGCCGGCGAG CTCCGCGCCGGCCTGCGGCGCGCGCTGCGCATCCTGGTGGCCGCCGGCGCCGCCGAGGTG GGCACGAACCGCAGCGACGGGCTGCGCCTCCGGTGCAAGGGCGCGCGTGACGAGGACGTG GAGGCGTTCCTGGACGAGGTGAGCGTGGAGAAGGGGCCGATGCACCCGGGGTCGGACAAG TGGGCGCTCCTTGCCTCGGCGCACCAGATGGGGAGCTGCCGGATGGGGAGGAGCGCCAAG CACGGCGGCGTCGACGGCGGCGGCGAGAGCTGGGAGGCGGAGGGGCTGTACGTCTGCGAC GGCAGCTTGCTCCCGACGGCCGTCGGCGTCAACCCGATGATCACCATCGAGTCCGTGGCG TATTGCGTCGCCAAGGGCATCGCCGAGTCGCTCGCGTCGCGCGCAGCGCGCTCAGTGGAA AACCGTGATGTGTCCACGAACCCTCCTCTAGCTTGTGAATCGTAA