Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0473400-03
CDS Infomation	cds chromosome:IRGSP-1.0:10:17584681:17591659:-1 gene:Os10g0473400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-glucosidase, GBA2 type domain containing protein. (Os10t0473400-01);Similar to predicted protein. (Os10t0473400-02);Similar to catalytic. (Os10t0473400-03)
Sequence	CAGGGCGTACCGCTTGGTGGGATGGGGAGTGGTAGCATTTCAAGAGGTTTCAGGGGAGAG TTCAAGAATTGGCATATCATTCCTGGTTTATGTGAGACTTCCCCGGTCATGGAGAACCAG TTTTCAATATTTGTATCTCGCGATGGGGGGAACAAAAAGTACTCATCGGTATTGTCTCCC GGACACCATGAAGGTTTAAAGAAATGTAATGACTCTGGAATTTCTTCATGGGACTGGAAC TTGAGCGGTCAACATTCTACCTATCATGCTTTATTTCCTAGGGCATGGACTGTTTATGAT GGTGAACCGGATCCAGACCTTAAAATCTCATGTCGTCAGATATCACCATTCATTCCTCAT GATTACAAAGATAGCAGCCTCCCAACTTCTGTCTTTGTGTACACTCTAGTGAACACTGGG AAAGACCGTGCGAAAGTGAGCCTGTTAATGACATGGGCGAATTCTATCGGAGGTTTTTCT CATCACTCTGGAGGCCATTTTAATGAGCCCTTCATTGCGGAGGATGGAGTTTCAGGAGTT CTTCTGCATCACAAAACAGCAAAGGATAATCCTCCGGTTACTTTTGCTATTGCTGCCTGT GAAACTCAGAATGTGAATGTGACAGTCTTGCCTGTATTTGGCCTCTCTGGAGAAGGCCAT GATTCAGCCAAGCAAATGTGGGATAGAATGAAACAGAACGGCCACTTTGACCGTGAAAAT TTCGAAGCTGGTACCAGTATGCCTTCATCTTCAGGGGAGACACTTTGTGCAGCTGTCTCA GCATCAACCTGGGTAGAGCCACATGGTAGATGTACTGTTGTATTTGGTTTGGCTTGGTCC TCTCCTAAAATAAAGTTTCAGAAGGGCTGCACATACAACAGGAGGTACACTGAATTTTAT GGAACTTCTGAAAGATCAGCTGTTAATTTGGTACACGATGCCTTGACAAAATATAGGATT TGGGAAGAGGAGATTGAGAAGTGGCAAAACCCCATACTCAAGAATGAAAAACTTCCAGAA TGGTACAAGTTCACACTTTTTAATGAGCTTTACTTTCTGGTAGCTGGGGGTACTGTTTGG ACAGATGGCCAACCACCAGTTATCGATGAAAAACCAAGTCCTGGTTCTAATCAACAGAAA TCTTCAAAAAGGGGCACTAGAGACACTAAACAGGAATCAGTTAAAGATAACCATGTCAAA CTGACAGCAGAGCAAGTCACTAATGGTGGTGACCTGGCTAATGGCGAAGAGCAAAGTGTG TCAAAGTATGCAGCAGTACATGGACCACAAATGGCTAAGGCAACCAACGGACTTGGGTCA CAAGAGCCAATTCCATACTTGCTTTCCAAGAATGGCCCTGAAAATGTTGGCAAATTTTTG TACCTGGAAGGAGTGGAATACATCATGTGGTGCACCTATGATGTGCATTTCTATGCTTCT TTTGCTCTGCTTGATCTGTTTCCCAAAATAGAGTTGAGTATCCAACGTGATTTTGCCAAT GCTGTTCTCTATGAAGACAGACGAAGAATGAAATTTTTGGCTGATGGTACTTCTGGAATT CGCAAGGTCAAAGGTGCCGTTCCGCATGACCTAGGAACACATGATCCATGGCATGAAATG AATGCGTACAACATACATGATACAAGCAAATGGAAAGATCTAAATCCAAAGTTTGTGCTC CAGGTATACAGAGACTTCGCTGCTACAGGTGATATGTCATTTGGTAGAGATGTTTGGCCT GCCGTCTGTGCAGTGATGGACTATATGAATCAATTTGACCGTGACGGTGATGGTCTCATT GAGAATGATGGGTTTCCTGATCAAACCTATGATGCTTGGACTGTACACGGAATTAGTGCT TACTGTGGCGGTCTCTGGCTTGCTGCACTTCAGGCTGCAGCTACAATGGCTCATCGGCTT GGTGATCGGCCATTTGCTGAAAAATACAAGCTCAAATTCATACAAGCGAAAGCAGTATAT GAGGCTAAGTTATGGAATGGGTCTTACTTCAATTATGACAGTGGCACAAGCAGTAATAGC CGATCTATTCAGGCGGATCAGCTGGCAGGGCAGTGGTATGCTGCTTCTTCAGGCTTGCCC CCGCTTTTCGATGAGAATAAAATAAGAAGTGCTCTGCAGAAAATATTTGAATTCAATGTA ATGAAGGTTAAAGGAGGACGATTGGGAGCTGTAAATGGTATGACTCCTAATGGGAAAGTG GATGAGACATGCATGCAATCTCGGGAAATCTGGACCGGTGTTACATACGGTGTTGCTGCA AACATGCTGCTCCATGGAATGGAGCATCAAGGATTCACCACTGCCGAAGGAATTTTTATT GCTGGTTGGTCAGAAGAAGGATATGGGTATTGGTTCCAAACACCGGAAGGCTGGACCATA GACGGGCACTACAGGTCGCTCATCTACATGCGGCCTCTCGCCATTTGGGCAATGCAATGG GCACGTTCTCCACCCAAGGCAATCCTTGATGCCCCCAAGGTAAACCTGATGGACAGGATA CACCTATCCCCACAAATGATCCGGGCAATGAACGAGATTAATGTTAGAAAGATAGCACCC GACAATAGATGTTTCCCTAGCTCTGCATTTCGTTGTGAATGCTGA

Peptide Sequence

PEP ID	Os10t0473400-03
PEP Infomation	pep chromosome:IRGSP-1.0:10:17584681:17591659:-1 gene:Os10g0473400 transcript:Os10t0473400-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-glucosidase, GBA2 type domain containing protein. (Os10t0473400-01);Similar to predicted protein. (Os10t0473400-02);Similar to catalytic. (Os10t0473400-03)
Sequence	QGVPLGGMGSGSISRGFRGEFKNWHIIPGLCETSPVMENQFSIFVSRDGGNKKYSSVLSP GHHEGLKKCNDSGISSWDWNLSGQHSTYHALFPRAWTVYDGEPDPDLKISCRQISPFIPH DYKDSSLPTSVFVYTLVNTGKDRAKVSLLMTWANSIGGFSHHSGGHFNEPFIAEDGVSGV LLHHKTAKDNPPVTFAIAACETQNVNVTVLPVFGLSGEGHDSAKQMWDRMKQNGHFDREN FEAGTSMPSSSGETLCAAVSASTWVEPHGRCTVVFGLAWSSPKIKFQKGCTYNRRYTEFY GTSERSAVNLVHDALTKYRIWEEEIEKWQNPILKNEKLPEWYKFTLFNELYFLVAGGTVW TDGQPPVIDEKPSPGSNQQKSSKRGTRDTKQESVKDNHVKLTAEQVTNGGDLANGEEQSV SKYAAVHGPQMAKATNGLGSQEPIPYLLSKNGPENVGKFLYLEGVEYIMWCTYDVHFYAS FALLDLFPKIELSIQRDFANAVLYEDRRRMKFLADGTSGIRKVKGAVPHDLGTHDPWHEM NAYNIHDTSKWKDLNPKFVLQVYRDFAATGDMSFGRDVWPAVCAVMDYMNQFDRDGDGLI ENDGFPDQTYDAWTVHGISAYCGGLWLAALQAAATMAHRLGDRPFAEKYKLKFIQAKAVY EAKLWNGSYFNYDSGTSSNSRSIQADQLAGQWYAASSGLPPLFDENKIRSALQKIFEFNV MKVKGGRLGAVNGMTPNGKVDETCMQSREIWTGVTYGVAANMLLHGMEHQGFTTAEGIFI AGWSEEGYGYWFQTPEGWTIDGHYRSLIYMRPLAIWAMQWARSPPKAILDAPKVNLMDRI HLSPQMIRAMNEINVRKIAPDNRCFPSSAFRCEC

Transcript Sequence

Transcript ID	Os10t0473400-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:17584681:17591659:-1 gene:Os10g0473400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-glucosidase, GBA2 type domain containing protein. (Os10t0473400-01);Similar to predicted protein. (Os10t0473400-02);Similar to catalytic. (Os10t0473400-03)
Sequence	GCAGGGCGTACCGCTTGGTGGGATGGGGAGTGGTAGCATTTCAAGAGGTTTCAGGGGAGA GTTCAAGAATTGGCATATCATTCCTGGTTTATGTGAGACTTCCCCGGTCATGGAGAACCA GTTTTCAATATTTGTATCTCGCGATGGGGGGAACAAAAAGTACTCATCGGTATTGTCTCC CGGACACCATGAAGGTTTAAAGAAATGTAATGACTCTGGAATTTCTTCATGGGACTGGAA CTTGAGCGGTCAACATTCTACCTATCATGCTTTATTTCCTAGGGCATGGACTGTTTATGA TGGTGAACCGGATCCAGACCTTAAAATCTCATGTCGTCAGATATCACCATTCATTCCTCA TGATTACAAAGATAGCAGCCTCCCAACTTCTGTCTTTGTGTACACTCTAGTGAACACTGG GAAAGACCGTGCGAAAGTGAGCCTGTTAATGACATGGGCGAATTCTATCGGAGGTTTTTC TCATCACTCTGGAGGCCATTTTAATGAGCCCTTCATTGCGGAGGATGGAGTTTCAGGAGT TCTTCTGCATCACAAAACAGCAAAGGATAATCCTCCGGTTACTTTTGCTATTGCTGCCTG TGAAACTCAGAATGTGAATGTGACAGTCTTGCCTGTATTTGGCCTCTCTGGAGAAGGCCA TGATTCAGCCAAGCAAATGTGGGATAGAATGAAACAGAACGGCCACTTTGACCGTGAAAA TTTCGAAGCTGGTACCAGTATGCCTTCATCTTCAGGGGAGACACTTTGTGCAGCTGTCTC AGCATCAACCTGGGTAGAGCCACATGGTAGATGTACTGTTGTATTTGGTTTGGCTTGGTC CTCTCCTAAAATAAAGTTTCAGAAGGGCTGCACATACAACAGGAGGTACACTGAATTTTA TGGAACTTCTGAAAGATCAGCTGTTAATTTGGTACACGATGCCTTGACAAAATATAGGAT TTGGGAAGAGGAGATTGAGAAGTGGCAAAACCCCATACTCAAGAATGAAAAACTTCCAGA ATGGTACAAGTTCACACTTTTTAATGAGCTTTACTTTCTGGTAGCTGGGGGTACTGTTTG GACAGATGGCCAACCACCAGTTATCGATGAAAAACCAAGTCCTGGTTCTAATCAACAGAA ATCTTCAAAAAGGGGCACTAGAGACACTAAACAGGAATCAGTTAAAGATAACCATGTCAA ACTGACAGCAGAGCAAGTCACTAATGGTGGTGACCTGGCTAATGGCGAAGAGCAAAGTGT GTCAAAGTATGCAGCAGTACATGGACCACAAATGGCTAAGGCAACCAACGGACTTGGGTC ACAAGAGCCAATTCCATACTTGCTTTCCAAGAATGGCCCTGAAAATGTTGGCAAATTTTT GTACCTGGAAGGAGTGGAATACATCATGTGGTGCACCTATGATGTGCATTTCTATGCTTC TTTTGCTCTGCTTGATCTGTTTCCCAAAATAGAGTTGAGTATCCAACGTGATTTTGCCAA TGCTGTTCTCTATGAAGACAGACGAAGAATGAAATTTTTGGCTGATGGTACTTCTGGAAT TCGCAAGGTCAAAGGTGCCGTTCCGCATGACCTAGGAACACATGATCCATGGCATGAAAT GAATGCGTACAACATACATGATACAAGCAAATGGAAAGATCTAAATCCAAAGTTTGTGCT CCAGGTATACAGAGACTTCGCTGCTACAGGTGATATGTCATTTGGTAGAGATGTTTGGCC TGCCGTCTGTGCAGTGATGGACTATATGAATCAATTTGACCGTGACGGTGATGGTCTCAT TGAGAATGATGGGTTTCCTGATCAAACCTATGATGCTTGGACTGTACACGGAATTAGTGC TTACTGTGGCGGTCTCTGGCTTGCTGCACTTCAGGCTGCAGCTACAATGGCTCATCGGCT TGGTGATCGGCCATTTGCTGAAAAATACAAGCTCAAATTCATACAAGCGAAAGCAGTATA TGAGGCTAAGTTATGGAATGGGTCTTACTTCAATTATGACAGTGGCACAAGCAGTAATAG CCGATCTATTCAGGCGGATCAGCTGGCAGGGCAGTGGTATGCTGCTTCTTCAGGCTTGCC CCCGCTTTTCGATGAGAATAAAATAAGAAGTGCTCTGCAGAAAATATTTGAATTCAATGT AATGAAGGTTAAAGGAGGACGATTGGGAGCTGTAAATGGTATGACTCCTAATGGGAAAGT GGATGAGACATGCATGCAATCTCGGGAAATCTGGACCGGTGTTACATACGGTGTTGCTGC AAACATGCTGCTCCATGGAATGGAGCATCAAGGATTCACCACTGCCGAAGGAATTTTTAT TGCTGGTTGGTCAGAAGAAGGATATGGGTATTGGTTCCAAACACCGGAAGGCTGGACCAT AGACGGGCACTACAGGTCGCTCATCTACATGCGGCCTCTCGCCATTTGGGCAATGCAATG GGCACGTTCTCCACCCAAGGCAATCCTTGATGCCCCCAAGGTAAACCTGATGGACAGGAT ACACCTATCCCCACAAATGATCCGGGCAATGAACGAGATTAATGTTAGAAAGATAGCACC CGACAATAGATGTTTCCCTAGCTCTGCATTTCGTTGTGAATGCTGACCACAAAAAAAAAA GAGAAGCAAAATGCAACAACTGAGTAGTAACATACATATATATACTTTCCTTTTCGGCTT TTCCTTGGCCCCTTACAAGTTTCAGTGGGGTTCATGGGGTTTTCCTTGAAATCAGAGGGC ATATAAATCTACGGAACCACTAAGCTCAGTAGCTCACACTCTCACAGCTCGAAAAGAGCT CTTGTTGTATAATTGTACAGTAAACTACAAAATCATATCGTCAGCATCATCTTTGCTCTG CGTC