Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0472400-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:17544776:17547680:1 gene:Os10g0472400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Thioredoxin. (Os10t0472400-01)
Sequence	ATGGCAGATGATGACTATCCGGTCAAGCTGCATATATACGATCTTAGCCAGGGGATGGCG CGGCAATTGTCAACAACAATCCTTGGCAAGGCTATTGAGGCAATTTGGCATACAGGGGTG GTAGTCTACGGGAAGGAGTACTTCTTTGGCGGCGGCATTCAGAAGGATCATCCCGGAAGA ACACCGTACGGGACCCCGGTCAGGGTGGAAGATCTTGGGGTCACCCATGTCCCCAGGGAG ATCTTTGAGGACTTCCTTCAGGATATCAACCCAAGGTACACTCCTGCAAACTACAACCTC CTCAGCAACAACTGCAACAACTTCACCAATGAAGCCGCGCAATTCCTCGTCGGTTCCGCC ATCCCGAGCTACATCCTGGAGCTGCCCAATGAGGTGATGAACAGCCCGATCGGCGCGCTC ATATTGCCGATGATTCAGGGGTTGGAGACAAGCTTGCGAGCTGGAGTTGCTCCTCAGCCG CCGCAATTCAAGCCTTCTCCGGTGGCGGCAGTGACGGCGACGCAGTCACCACCATCGGGT AGCATCCATGTCGAGCCGAAATCGACCGCCTCCGACAAGACGGAGGTTGACAACAACGGC GGCGGGATTCCGCCGGCGGTACAACCTGCTCCGGTGGCGGCGGCGACGTCACCAGCAGCA GTAGCCGAGGCGAGCATGGCGCCGCCGCCTCCGGTGGATCCGCTCCGGGAGGCGAAGAGC CGGGTGCAGGAGGAGATAAAGAGGGAGTTCGCGGCGATCATGGCGACGGGCGCCGTACAG GCCGGCGAGGCGGCGGCGCTCGCGACGAGGAGGGTCATGGAGCGGCACGGGCTGCGTCGC GCCGCCGTCGCCGGCGGCGGCATGCAGCGAGGGTAG

Peptide Sequence

PEP ID	Os10t0472400-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:17544776:17547680:1 gene:Os10g0472400 transcript:Os10t0472400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Thioredoxin. (Os10t0472400-01)
Sequence	MADDDYPVKLHIYDLSQGMARQLSTTILGKAIEAIWHTGVVVYGKEYFFGGGIQKDHPGR TPYGTPVRVEDLGVTHVPREIFEDFLQDINPRYTPANYNLLSNNCNNFTNEAAQFLVGSA IPSYILELPNEVMNSPIGALILPMIQGLETSLRAGVAPQPPQFKPSPVAAVTATQSPPSG SIHVEPKSTASDKTEVDNNGGGIPPAVQPAPVAAATSPAAVAEASMAPPPPVDPLREAKS RVQEEIKREFAAIMATGAVQAGEAAALATRRVMERHGLRRAAVAGGGMQRG

Transcript Sequence

Transcript ID	Os10t0472400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:17544776:17547680:1 gene:Os10g0472400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Thioredoxin. (Os10t0472400-01)
Sequence	ACTCTCCTCTCCACGCCACGCAAGAGATACTCCTCCTTCGCAAGGAACAGAGGTTGAGCT GCTTCCGAAGCCAAAGTCGGGCCAAGATGGCAGATGATGACTATCCGGTCAAGCTGCATA TATACGATCTTAGCCAGGGGATGGCGCGGCAATTGTCAACAACAATCCTTGGCAAGGCTA TTGAGGCAATTTGGCATACAGGGGTGGTAGTCTACGGGAAGGAGTACTTCTTTGGCGGCG GCATTCAGAAGGATCATCCCGGAAGAACACCGTACGGGACCCCGGTCAGGGTGGAAGATC TTGGGGTCACCCATGTCCCCAGGGAGATCTTTGAGGACTTCCTTCAGGATATCAACCCAA GGTACACTCCTGCAAACTACAACCTCCTCAGCAACAACTGCAACAACTTCACCAATGAAG CCGCGCAATTCCTCGTCGGTTCCGCCATCCCGAGCTACATCCTGGAGCTGCCCAATGAGG TGATGAACAGCCCGATCGGCGCGCTCATATTGCCGATGATTCAGGGGTTGGAGACAAGCT TGCGAGCTGGAGTTGCTCCTCAGCCGCCGCAATTCAAGCCTTCTCCGGTGGCGGCAGTGA CGGCGACGCAGTCACCACCATCGGGTAGCATCCATGTCGAGCCGAAATCGACCGCCTCCG ACAAGACGGAGGTTGACAACAACGGCGGCGGGATTCCGCCGGCGGTACAACCTGCTCCGG TGGCGGCGGCGACGTCACCAGCAGCAGTAGCCGAGGCGAGCATGGCGCCGCCGCCTCCGG TGGATCCGCTCCGGGAGGCGAAGAGCCGGGTGCAGGAGGAGATAAAGAGGGAGTTCGCGG CGATCATGGCGACGGGCGCCGTACAGGCCGGCGAGGCGGCGGCGCTCGCGACGAGGAGGG TCATGGAGCGGCACGGGCTGCGTCGCGCCGCCGTCGCCGGCGGCGGCATGCAGCGAGGGT AGAACGGTCACATTTGCACCCACACGAGCATGTTCAATTGTATATATATACGTGCAAGAA CAGGGAAGCTCATTGCGTAAATCCATTTATATTTACACTCTT