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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0469900-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:17374458:17378953:1 gene:Os10g0469900 gene_biotype:protein_coding transcript_biotype:protein_coding description:TGF-beta receptor, type I/II extracellular region family protein. (Os10t0469900-01);Similar to peptide transporter PTR2. (Os10t0469900-02)
Sequence

ATGGAGAACGGCGCCGGCGCCGGGGACGACGAGTACACGCGCGACGGCTCCGTCGACCTC
CGCGGCAACCCCGTCCTCCGCTCCAAGCGCGGCGGCTGGAAGGCCTGCTCCTTCATCGTC
GTGTACGAGCTGTTCGAGAGGATGGCGTACTACGGGATCGCGTCGAACCTGGTGATCTAC
CTGACGGAGAAGCTGCACCAGGGCACCGTGGAGGCGGCCAACAACGTCACCAACTGGTCC
GGCACCGTCTTCATCACGCCGCTCATCGGCGCCGTCGTCGCCGACGCCTGGCTCGGCCGC
TACTGGACCTTCGTCGCCGGCTCCGCCGTCTACCTCATGGGCATGCTGCTGCTCACACTG
GCCGTCTCCGTGCCAGCACTGAAGCCGCCGCCGTGCGACGGCGGCGGCGGCGCCGCCTGC
CCGCGCGCGTCGGCGCTGCAGCTGGGCGTCTACTTCGGCGGGCTGTACACCATCGCGCTC
GGCCACGGCGGCACGAAGCCGAACATCTCCACCATCGGCGCCGACCAGTTCGACGACTTC
CACCCGCCGGAGAAGCTGCATAAGCTCTCCTTCTTCAACTGGTGGATGTTCACCATCTTC
CTCGGCATCCTCTTCTCCACCACCGTCCTCGTCTACCTCCAGGACAACGTCAGCTGGACC
GTCGGCTACGGCATCCCCACCCTGGGCCTCATGGTCTCCGTCGCCGTCTTCCTCTCCGGT
ACGCCGCTGTACCGCCACAAGGTGCCCCAGGGTAGCCCCCTCGCCACGATGGGGAGGGTC
GTCGCCGCCGCCGTGTGGAAGTGGCGCGTCCCGCTCCCCGCCGACTCCAAGGAGCTCCAC
GAGCTCGAGCTCGAGCACTACACCACCCGCCGCGGGTTCCGCATGGACGCGACGGTGTCC
ATGGCGTTCCTGAACAAGGCGGCGGTGAAGCCGGGCGAAGGAGGAGGAGGATCGGTGGCG
CGGCTGCCCGGGTGGACGCTGTGCACGGTGACGCAGGTGGAGGAGACGAAGCAGATCGTG
AAGCTGGTGCCGCTGCTCGCCACAATGGTGGTGCCGTGCACGCTGGTGGCGCAGGCGGGC
ACGCTGTTCGTCAAGCAGGGCGTGACGCTGGACCGCCGCATCGGGAAGTTCCACGTGCCG
CCGGCGAGCCTCGGCGCGTTCGTGACGGCGACGATGCTCATCTGCATCGTGCTCTACGAC
CGGTTCCTCGTCCCCGCCGTGCGCCGGCGGACCAAGAACCCGAGGGGGATCACGCTGCTG
CAGCGGATCAGCCTGGGGATGCTGCTCCAGATCGTGACGATGGTGGTGACGTCGGTGGTG
GAGAGCCAGAGGCTGGGGTACGCGAGGAGGCACGGGCTGGTCGCCACCGGCGGGCAGCTG
CCGGTGACGATCTTCATCCTGCTGCCGCAGTTCGTGCTGCTGGGCGTCGCCGACGCGTTC
CTGGTGGTGGGGCAGATCGAGTTCTTCTACGACCAGGCGCCGGAGAGCATGAAGAGCCTC
GGGACGGCGATGTCGCTGACGGCGTACGGCGCCGGGAACCTGCTGAGCAGCGCCATCCTC
GCGGCCGTCGAGCGGGTCACCGGCGGCGGCAAGGGGAGGACGCCGTGGGTGACCAACAAC
CTCAACGCCTCGCGCCTCGACTACTACTACGCGTTCCTCGCCACCCTCGCCGCCGCGAAC
CTGCTGGCGTTCGTCGTGCTCAGCTGCAAGTACTCGTACCGCGTCGAGTCCACGGAGACC
ATCGACGTCGACGTCGCCATGGACAACGTCGCGCAGGGCGGCGGCGTGGTGACGGTCAAA
TCAGAGGCAGCCCCAATGGCATGA

Peptide Sequence

PEP ID

Os10t0469900-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:17374458:17378953:1 gene:Os10g0469900 transcript:Os10t0469900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:TGF-beta receptor, type I/II extracellular region family protein. (Os10t0469900-01);Similar to peptide transporter PTR2. (Os10t0469900-02)
Sequence

MENGAGAGDDEYTRDGSVDLRGNPVLRSKRGGWKACSFIVVYELFERMAYYGIASNLVIY
LTEKLHQGTVEAANNVTNWSGTVFITPLIGAVVADAWLGRYWTFVAGSAVYLMGMLLLTL
AVSVPALKPPPCDGGGGAACPRASALQLGVYFGGLYTIALGHGGTKPNISTIGADQFDDF
HPPEKLHKLSFFNWWMFTIFLGILFSTTVLVYLQDNVSWTVGYGIPTLGLMVSVAVFLSG
TPLYRHKVPQGSPLATMGRVVAAAVWKWRVPLPADSKELHELELEHYTTRRGFRMDATVS
MAFLNKAAVKPGEGGGGSVARLPGWTLCTVTQVEETKQIVKLVPLLATMVVPCTLVAQAG
TLFVKQGVTLDRRIGKFHVPPASLGAFVTATMLICIVLYDRFLVPAVRRRTKNPRGITLL
QRISLGMLLQIVTMVVTSVVESQRLGYARRHGLVATGGQLPVTIFILLPQFVLLGVADAF
LVVGQIEFFYDQAPESMKSLGTAMSLTAYGAGNLLSSAILAAVERVTGGGKGRTPWVTNN
LNASRLDYYYAFLATLAAANLLAFVVLSCKYSYRVESTETIDVDVAMDNVAQGGGVVTVK
SEAAPMA

Transcript Sequence

Transcript ID

Os10t0469900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:17374458:17378953:1 gene:Os10g0469900 gene_biotype:protein_coding transcript_biotype:protein_coding description:TGF-beta receptor, type I/II extracellular region family protein. (Os10t0469900-01);Similar to peptide transporter PTR2. (Os10t0469900-02)
Sequence

AGCCACTCCCCGCGCAGCAGCTCAGCCGTCGCTACCACCACCTCAAGCTCCCGCCTCGCG
TGCAGCTAGCTGAGAGCGAGCGCTCGCCATGGAGAACGGCGCCGGCGCCGGGGACGACGA
GTACACGCGCGACGGCTCCGTCGACCTCCGCGGCAACCCCGTCCTCCGCTCCAAGCGCGG
CGGCTGGAAGGCCTGCTCCTTCATCGTCGTGTACGAGCTGTTCGAGAGGATGGCGTACTA
CGGGATCGCGTCGAACCTGGTGATCTACCTGACGGAGAAGCTGCACCAGGGCACCGTGGA
GGCGGCCAACAACGTCACCAACTGGTCCGGCACCGTCTTCATCACGCCGCTCATCGGCGC
CGTCGTCGCCGACGCCTGGCTCGGCCGCTACTGGACCTTCGTCGCCGGCTCCGCCGTCTA
CCTCATGGGCATGCTGCTGCTCACACTGGCCGTCTCCGTGCCAGCACTGAAGCCGCCGCC
GTGCGACGGCGGCGGCGGCGCCGCCTGCCCGCGCGCGTCGGCGCTGCAGCTGGGCGTCTA
CTTCGGCGGGCTGTACACCATCGCGCTCGGCCACGGCGGCACGAAGCCGAACATCTCCAC
CATCGGCGCCGACCAGTTCGACGACTTCCACCCGCCGGAGAAGCTGCATAAGCTCTCCTT
CTTCAACTGGTGGATGTTCACCATCTTCCTCGGCATCCTCTTCTCCACCACCGTCCTCGT
CTACCTCCAGGACAACGTCAGCTGGACCGTCGGCTACGGCATCCCCACCCTGGGCCTCAT
GGTCTCCGTCGCCGTCTTCCTCTCCGGTACGCCGCTGTACCGCCACAAGGTGCCCCAGGG
TAGCCCCCTCGCCACGATGGGGAGGGTCGTCGCCGCCGCCGTGTGGAAGTGGCGCGTCCC
GCTCCCCGCCGACTCCAAGGAGCTCCACGAGCTCGAGCTCGAGCACTACACCACCCGCCG
CGGGTTCCGCATGGACGCGACGGTGTCCATGGCGTTCCTGAACAAGGCGGCGGTGAAGCC
GGGCGAAGGAGGAGGAGGATCGGTGGCGCGGCTGCCCGGGTGGACGCTGTGCACGGTGAC
GCAGGTGGAGGAGACGAAGCAGATCGTGAAGCTGGTGCCGCTGCTCGCCACAATGGTGGT
GCCGTGCACGCTGGTGGCGCAGGCGGGCACGCTGTTCGTCAAGCAGGGCGTGACGCTGGA
CCGCCGCATCGGGAAGTTCCACGTGCCGCCGGCGAGCCTCGGCGCGTTCGTGACGGCGAC
GATGCTCATCTGCATCGTGCTCTACGACCGGTTCCTCGTCCCCGCCGTGCGCCGGCGGAC
CAAGAACCCGAGGGGGATCACGCTGCTGCAGCGGATCAGCCTGGGGATGCTGCTCCAGAT
CGTGACGATGGTGGTGACGTCGGTGGTGGAGAGCCAGAGGCTGGGGTACGCGAGGAGGCA
CGGGCTGGTCGCCACCGGCGGGCAGCTGCCGGTGACGATCTTCATCCTGCTGCCGCAGTT
CGTGCTGCTGGGCGTCGCCGACGCGTTCCTGGTGGTGGGGCAGATCGAGTTCTTCTACGA
CCAGGCGCCGGAGAGCATGAAGAGCCTCGGGACGGCGATGTCGCTGACGGCGTACGGCGC
CGGGAACCTGCTGAGCAGCGCCATCCTCGCGGCCGTCGAGCGGGTCACCGGCGGCGGCAA
GGGGAGGACGCCGTGGGTGACCAACAACCTCAACGCCTCGCGCCTCGACTACTACTACGC
GTTCCTCGCCACCCTCGCCGCCGCGAACCTGCTGGCGTTCGTCGTGCTCAGCTGCAAGTA
CTCGTACCGCGTCGAGTCCACGGAGACCATCGACGTCGACGTCGCCATGGACAACGTCGC
GCAGGGCGGCGGCGTGGTGACGGTCAAATCAGAGGCAGCCCCAATGGCATGACAGCACTT
CCGGAATTGTATCCTGTCTATTCCCGTCTGGATTCTGAAGTTGCAATGTAATGAAGAAAC
GGTGATGATACATATTAGCACTTTAAAAATGTTAAATGAAAATTTTATTTACTCGTTCTG
TAAAGGAACGGTAATACGGAC