Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0469700-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:17365026:17366810:-1 gene:Os10g0469700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, typical subtype containing protein. (Os10t0469700-01)
Sequence	ATGGCAGCCAAGGCCCCTCTCGTGCTGCGCCTCTGTCTCTTCCTCTGCATCTCCCTCTCC CTCTTGCTGTTATCATCTCCTCAACGGGTGACGAGCTTGAGCCTCGATGCCGATGTGGAC GATCACTACTACCATTACGATGGGGACGAAGACGATGACAACTACTACCATGATGACGAC GACGACGTCTTCTCCGGCAGGCCGGTACGGAGAATATACGACGGCGACGACGACGAAAAC TACTACCGCAATGATGAAGTAGACTTCTCCAGCAGGCCGGCTCGGAGGCTATACGACGGC GGCGCAGTCATGCCGGAGAAGTACAACGTCCTGAACGGCAACTCCTCCAACAGCAGCTCC GGCTCGGCCTTTTGCAGGTTGCTTTCTCTCCAGATCCTGGACCTGTCAAACAACAAGCTC ACCGGTAAGCTGCCTGACTGCTGGTGGAATCTGCAGAGCCTGCAGTTCATGGACCTCTCC CACAACCGCTTCTCAGGTGAAATCCCTGCAGTCAATACAAGCTACAATTGTTCTCTTGAA TCGGTTCATCTTGCCGGCAACGGCTTCACCGGTGTTTTTCCATCAGCGCTAAAGGGATGC CAGACGCTGGTCACTTTAGATATTGGGAACAACAATTTCTTTGGTGGCATTCCTCCTTGG ATTGGGAAAGGCCTTTCATCTTTGAAGATTCTTAGCCTTAGATCAAACAACTTCACCGGT GAAATTCCTTCTGAGTTATCACATCTTTCTCAACTCCAACTGCTAGATATGACCAACAAC AGTTTGACAGGGTCGATTCCCACATCTTTTGGCAACTTAACATCCATGAAGAATCCAAAA ATTGTATCCAGTGCGGGATCATTAGATGGGTCTACCTATCAGGATAGAATCGATATAATC TGGAAGGGGCAGGAGATAATTTTCCAAAAAACACTTCAATTAATGACGGGTATTGATTTG TCAGGTAACTCATTGTCTGAATGCATCCCCGATGAGTTAACAAACCTCCAAGGCCTTCGA TTTCTGAACTTGTCAAGGAACAATCTATCGTGTGGGATACCTGAAAACATAGGTAGTTTG AAAAATCTTGAGTCCCTTGACCTCTCGTCAAATGAAATTTCAGGAGCCATTCCTCCAAGC CTTGCTGGTATATCTACCCTTAGCACTCTTAATCTCTCGTATAATCATCTATCAGGCAAG ATACCCACCGGGAATCAACTTCAAACCTTCACTGACCCATCAATATACAGCCATAATTCA GGGCTCTGTGGCCCTCCGTTGAACATTTCATGCACAAATGCTTCAGTTGCGTCAGATGAG AGAGACTGTAGAACATGCGAGGACCAGTATTTCTACTACTGTGTAATGGCTGGAGTGGTT TTCGGTTTTTGGCTATGGTTTGGAATGCTCCTTTCCATCGGAACCTGGAGGTATGCCATT TTCGGTTTTGTTGATGGCATGCAATGTAAAGTTATGCAGAAAGTCTCCTCTGTTGATAAA TTTCTTTCAAGAGGAAATACTGATCAGTATTTGTAG

Peptide Sequence

PEP ID	Os10t0469700-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:17365026:17366810:-1 gene:Os10g0469700 transcript:Os10t0469700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, typical subtype containing protein. (Os10t0469700-01)
Sequence	MAAKAPLVLRLCLFLCISLSLLLLSSPQRVTSLSLDADVDDHYYHYDGDEDDDNYYHDDD DDVFSGRPVRRIYDGDDDENYYRNDEVDFSSRPARRLYDGGAVMPEKYNVLNGNSSNSSS GSAFCRLLSLQILDLSNNKLTGKLPDCWWNLQSLQFMDLSHNRFSGEIPAVNTSYNCSLE SVHLAGNGFTGVFPSALKGCQTLVTLDIGNNNFFGGIPPWIGKGLSSLKILSLRSNNFTG EIPSELSHLSQLQLLDMTNNSLTGSIPTSFGNLTSMKNPKIVSSAGSLDGSTYQDRIDII WKGQEIIFQKTLQLMTGIDLSGNSLSECIPDELTNLQGLRFLNLSRNNLSCGIPENIGSL KNLESLDLSSNEISGAIPPSLAGISTLSTLNLSYNHLSGKIPTGNQLQTFTDPSIYSHNS GLCGPPLNISCTNASVASDERDCRTCEDQYFYYCVMAGVVFGFWLWFGMLLSIGTWRYAI FGFVDGMQCKVMQKVSSVDKFLSRGNTDQYL

Transcript Sequence

Transcript ID	Os10t0469700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:17365026:17366810:-1 gene:Os10g0469700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, typical subtype containing protein. (Os10t0469700-01)
Sequence	ACTTCAGTTCCACAAGCTCCTTTGCACTCTACCAAATCCAGCCATGGCAGCCAAGGCCCC TCTCGTGCTGCGCCTCTGTCTCTTCCTCTGCATCTCCCTCTCCCTCTTGCTGTTATCATC TCCTCAACGGGTGACGAGCTTGAGCCTCGATGCCGATGTGGACGATCACTACTACCATTA CGATGGGGACGAAGACGATGACAACTACTACCATGATGACGACGACGACGTCTTCTCCGG CAGGCCGGTACGGAGAATATACGACGGCGACGACGACGAAAACTACTACCGCAATGATGA AGTAGACTTCTCCAGCAGGCCGGCTCGGAGGCTATACGACGGCGGCGCAGTCATGCCGGA GAAGTACAACGTCCTGAACGGCAACTCCTCCAACAGCAGCTCCGGCTCGGCCTTTTGCAG GTTGCTTTCTCTCCAGATCCTGGACCTGTCAAACAACAAGCTCACCGGTAAGCTGCCTGA CTGCTGGTGGAATCTGCAGAGCCTGCAGTTCATGGACCTCTCCCACAACCGCTTCTCAGG TGAAATCCCTGCAGTCAATACAAGCTACAATTGTTCTCTTGAATCGGTTCATCTTGCCGG CAACGGCTTCACCGGTGTTTTTCCATCAGCGCTAAAGGGATGCCAGACGCTGGTCACTTT AGATATTGGGAACAACAATTTCTTTGGTGGCATTCCTCCTTGGATTGGGAAAGGCCTTTC ATCTTTGAAGATTCTTAGCCTTAGATCAAACAACTTCACCGGTGAAATTCCTTCTGAGTT ATCACATCTTTCTCAACTCCAACTGCTAGATATGACCAACAACAGTTTGACAGGGTCGAT TCCCACATCTTTTGGCAACTTAACATCCATGAAGAATCCAAAAATTGTATCCAGTGCGGG ATCATTAGATGGGTCTACCTATCAGGATAGAATCGATATAATCTGGAAGGGGCAGGAGAT AATTTTCCAAAAAACACTTCAATTAATGACGGGTATTGATTTGTCAGGTAACTCATTGTC TGAATGCATCCCCGATGAGTTAACAAACCTCCAAGGCCTTCGATTTCTGAACTTGTCAAG GAACAATCTATCGTGTGGGATACCTGAAAACATAGGTAGTTTGAAAAATCTTGAGTCCCT TGACCTCTCGTCAAATGAAATTTCAGGAGCCATTCCTCCAAGCCTTGCTGGTATATCTAC CCTTAGCACTCTTAATCTCTCGTATAATCATCTATCAGGCAAGATACCCACCGGGAATCA ACTTCAAACCTTCACTGACCCATCAATATACAGCCATAATTCAGGGCTCTGTGGCCCTCC GTTGAACATTTCATGCACAAATGCTTCAGTTGCGTCAGATGAGAGAGACTGTAGAACATG CGAGGACCAGTATTTCTACTACTGTGTAATGGCTGGAGTGGTTTTCGGTTTTTGGCTATG GTTTGGAATGCTCCTTTCCATCGGAACCTGGAGGTATGCCATTTTCGGTTTTGTTGATGG CATGCAATGTAAAGTTATGCAGAAAGTCTCCTCTGTTGATAAATTTCTTTCAAGAGGAAA TACTGATCAGTATTTGTAGCTGTGTGTTTTCTTTCTGTACCATCTGAAGATGTAGCATGG TTAGTTTTGTCAGTGTTCTGTAATTGGCAGGAGTCATAGGACCCCCAACAAACTTCCTTT GTATCAAGACTAAGATGTAAGAAGTTACTGCATCCATCCAAAATTATATGGAACATGTCC ATCTTATATACTACCAACAAATGCTGCTATGCTTGGATATTCATT