Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0469600-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:17357738:17361914:-1 gene:Os10g0469600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein, expressed. (Os10t0469600-01)
Sequence	ATGGCACGCCTCGTCCTCCCTCTGCTGATCATCCTCGTGGCGGCGGCTGCTGCCATCCCT GCGCTGGCCAATGCGGCGACGCCGACGGAAGCGGAGGCGCTGCTGGCGTGGAAGGCCAGC CTGCAGGACGACGCGGCCGCGCTGTCCGGGTGGAGCCGCGCCGCGCCGGTGTGCGCGTGG CGCGGCGTGGCCTGCGACGCCTCCGCCGCCGCCGGCGCCCGCGTCGCGAAGCTGCGGCTC CAGGGGCTGGGGCTCGGCGGCGGCCTCGACGAGCTCGACTTCGCGGCGCTCCCGGCGCTG GCCGAGCTCGACCTCAACGGGAACAACTTCACCGGCGCCATCCCCGCGAGCATCACGCGG CTGCGCTCGCTGACCTCGCTCGACCTCGGCAATAATGGCTTCAGCGACTCCATCCCGCCG CAGTTCGGCGACCTCTCCGGCCTCGTCGACCTCCGCCTCTACAACAACAACCTCGTCGGC GCCATCCCGCACCAGCTAAGCCGTCTCCCCAATATTATCCATTTTGACCTGGGAGCAAAC TACCTGACCGACCAGGACTTCGGCAAGTTCTCGCCGATGCCCACCGTCACGTTCATGTCG CTCTACCTCAACTCCTTCAATGGCAGCTTCCCGGAGTTCGTCCTCAGGAGCGGCAACATC ACCTACCTCGACCTGTCGCAGAATACTCTGTTCGGGAAGATACCGGACACGCTGCCGGAG AAGCTCCCGAATCTGAGGTACCTCAACCTGTCCATCAATGCGTTCTCCGGCTCGATTCCG GCGTCGCTCGGGAAGTTGATGAAGCTGCAGGACCTGCGGATGGCCGGCAACAATCTCACC GGCGGCATCCCGGAGTTCCTTGGGTCGATGCCGCAATTGAGGATTCTTGAACTCGGCGAC AACCAGCTCGGCGGGGCGATCCCGCCGGTTCTTGGCCGGCTCCAGATGCTGCAGCGGCTC GACATCAAGAACTCCGGCCTTGTCTCAACTCTGCCGTCGCAGCTGGGAAATCTGAAGAAT CTCATTTTCTTCGAGCTGTCCTTGAACCGGCTCTCCGGTGGCTTGCCGCCGGAGTTCGCC GGGATGCGGGCAATGCGGTACTTCGGCATTTCCACGAACAACCTCACCGGTGAGATCCCG CCGGCGTTGTTCACGAGCTGGCCGGAGCTCATAGTGTTCCAAGTGCAGAACAACTCGTTG ACCGGCAAAATTCCATCGGAGCTCAGCAAGGCAAGGAAACTGGAATTCCTTTACCTATTC AGCAACAACCTTAGCGGTTCCATCCCGGTAGAGCTCGGCGAGCTGGAGAACCTGGTAGAG CTAGATTTGTCGGAGAACTCGCTCACCGGACCGATCCCCAGCTCGCTCGGCAAGCTCAAG CAACTCACTAAGTTGGCGTTGTTCTTCAACAACCTCACCGGTACGATCCCACCTGAGATT GGCAACATGACAGCGTTGCAAAGCTTCGACGTGAACACCAACCGTCTGCAAGGTGAGCTC CCTGCCACCATCTCGTCCCTCAGGAACCTTCAGTACCTCTCCGTGTTCAACAACTACATG AGCGGCACCATTCCGCCGGACCTCGGCAAGGGCATAGCCTTGCAGCACGTGAGCTTCACC AACAACAGCTTCTCCGGCGAGCTGCCGCGCCACATCTGCGACGGCTTCGCGCTGGACCAA CTCACGGCGAACTACAACAACTTCACCGGCACGCTGCCGTTGTGCCTGAAGAATTGCACG GCGCTATACCGGGTCCGGCTGGAAGAGAACCACTTCACCGGCGACATCTCGGAGGCCTTC GGCGTCCACCGCATCCTGCAATATTTGGACGTCTCCGGGAACAAGCTTACCGGTGAGCTG TCCTCTGACTGGGGACAGTGCACCAACCTCACCTATCTGTCTATCAATGGTAACAGCATA TCCGGCAACCTTGATTCGACCTTTTGTAAATTGTCATCTCTTCAGTTTTTGGATCTATCG AATAACCGATTCAATGGTGAGCTCCCAAGTTGTTGGTGGGAGTTGCAAGCTTTACTGTTT ATGGACATCTCCGGCAACGACTTTTATGGTGAATTGCCAGCAACAGAAAGCCTTGAACTT CCTCTACAATCGATGCATCTCGCTAACAATAGTTTCTCTGGAGTTTTCCCAAATATTGTT CGCAAATGTGGAGCGCTTGTTACCCTAGATATGGGGAACAACAAGTTCTTTGGCCATATT CCCTCTTGGATTGGAATTAGTCTTCCTCTCCTAAGAATTCTTATCCTTCGATCAAATAAT TTCAGTGGAGAGATTCCTACAGAATTATCCCAACTTTCTGAGCTTCAACTTCTTGACTTG GCCAGCAACGTGTTAACTGGATTCATCCCAACAAGTTTTGGCAACTTATCATCCATGACA CAAGCAAAAACCTTGCCAGCGACAGAATATTTTAACGCGGAAAGCAGTCCTTTTCAGCCA GAAGTACCCCAGGTTCCCAAGCCTCACCGCAGAAGAGAACCCAAAAATCAGTCCCCTCTT GATCAGTCTAGAGACAGAGTTAGCATACAATGGAAGGGACATGAAGAAACTTTTCAAAGA ACAGCTATGTTAATGACAGGCATTGATTTATCAGGCAATTCACTTTACGGTGAAATCCCA AAAGAGCTAACATACCTTCGGGGCCTCCGGTTTTTGAACTTGTCATGGAACGATCTATCA GGCAGTATTCCAGAAAGAATTGGCAATTTGAATATCTTGGAGTCCCTTGACTTGTCATGG AATGAGCTTTCAGGTGTTATCCCCGCAAGCATTTCAAATCTGTCATGCCTCAGTGTGTTA AATCTCTCAAACAACCACTTATGGGGAAGCATACCCACAGGAAGACAACTTCAGACATTT GTGGATCCCTCAATTTATAGCAACAATTTGGGCCTTTGTGGCTTCCCTTTGATAATAGCC TGCCAGGCATCTAGATTGGATGAGAAAAATGAAGATCATAAAGAACTTGATATATGTTTA TTTTACTCTTTAATTCTTGGCATTGTTTTCGGGTTTTGGCTTTGGTTTGGAGTTCTAATT TTACTTAAGCCATTAAGAGTTTTTGTTTTTCATTCTGTTGACCACATAGAAAGAAGCTAT GCAAATTGCAGAAGATGTATGCACTAA

Peptide Sequence

PEP ID	Os10t0469600-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:17357738:17361914:-1 gene:Os10g0469600 transcript:Os10t0469600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein, expressed. (Os10t0469600-01)
Sequence	MARLVLPLLIILVAAAAAIPALANAATPTEAEALLAWKASLQDDAAALSGWSRAAPVCAW RGVACDASAAAGARVAKLRLQGLGLGGGLDELDFAALPALAELDLNGNNFTGAIPASITR LRSLTSLDLGNNGFSDSIPPQFGDLSGLVDLRLYNNNLVGAIPHQLSRLPNIIHFDLGAN YLTDQDFGKFSPMPTVTFMSLYLNSFNGSFPEFVLRSGNITYLDLSQNTLFGKIPDTLPE KLPNLRYLNLSINAFSGSIPASLGKLMKLQDLRMAGNNLTGGIPEFLGSMPQLRILELGD NQLGGAIPPVLGRLQMLQRLDIKNSGLVSTLPSQLGNLKNLIFFELSLNRLSGGLPPEFA GMRAMRYFGISTNNLTGEIPPALFTSWPELIVFQVQNNSLTGKIPSELSKARKLEFLYLF SNNLSGSIPVELGELENLVELDLSENSLTGPIPSSLGKLKQLTKLALFFNNLTGTIPPEI GNMTALQSFDVNTNRLQGELPATISSLRNLQYLSVFNNYMSGTIPPDLGKGIALQHVSFT NNSFSGELPRHICDGFALDQLTANYNNFTGTLPLCLKNCTALYRVRLEENHFTGDISEAF GVHRILQYLDVSGNKLTGELSSDWGQCTNLTYLSINGNSISGNLDSTFCKLSSLQFLDLS NNRFNGELPSCWWELQALLFMDISGNDFYGELPATESLELPLQSMHLANNSFSGVFPNIV RKCGALVTLDMGNNKFFGHIPSWIGISLPLLRILILRSNNFSGEIPTELSQLSELQLLDL ASNVLTGFIPTSFGNLSSMTQAKTLPATEYFNAESSPFQPEVPQVPKPHRRREPKNQSPL DQSRDRVSIQWKGHEETFQRTAMLMTGIDLSGNSLYGEIPKELTYLRGLRFLNLSWNDLS GSIPERIGNLNILESLDLSWNELSGVIPASISNLSCLSVLNLSNNHLWGSIPTGRQLQTF VDPSIYSNNLGLCGFPLIIACQASRLDEKNEDHKELDICLFYSLILGIVFGFWLWFGVLI LLKPLRVFVFHSVDHIERSYANCRRCMH

Transcript Sequence

Transcript ID	Os10t0469600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:17357738:17361914:-1 gene:Os10g0469600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein, expressed. (Os10t0469600-01)
Sequence	GTAATAAATTAGTTTATATAAAAAAAATCTCAAACTCAAATGACATTTACAGAGTGATTC TTGCGATTTTCACATTGCTGTAAGAGAGATAGCTACGCAGGTGTGGAAGAAATCCTCCCA TTTTGAACGATTGACCTAGCCAGAGTCCAATATGGCGGGAAGCGACGGCGACGCTCGTAT GAATTCACGCGCACGTGGCTTTGGAGGTGCGACGAACCCATTTGCTGGTGTTTTAGCCAC TCGTCGTATCACAACAGTTCGCCAATGAAGGCGTCGACTGCCCACAATCCCACATGGCAC GCCTCGTCCTCCCTCTGCTGATCATCCTCGTGGCGGCGGCTGCTGCCATCCCTGCGCTGG CCAATGCGGCGACGCCGACGGAAGCGGAGGCGCTGCTGGCGTGGAAGGCCAGCCTGCAGG ACGACGCGGCCGCGCTGTCCGGGTGGAGCCGCGCCGCGCCGGTGTGCGCGTGGCGCGGCG TGGCCTGCGACGCCTCCGCCGCCGCCGGCGCCCGCGTCGCGAAGCTGCGGCTCCAGGGGC TGGGGCTCGGCGGCGGCCTCGACGAGCTCGACTTCGCGGCGCTCCCGGCGCTGGCCGAGC TCGACCTCAACGGGAACAACTTCACCGGCGCCATCCCCGCGAGCATCACGCGGCTGCGCT CGCTGACCTCGCTCGACCTCGGCAATAATGGCTTCAGCGACTCCATCCCGCCGCAGTTCG GCGACCTCTCCGGCCTCGTCGACCTCCGCCTCTACAACAACAACCTCGTCGGCGCCATCC CGCACCAGCTAAGCCGTCTCCCCAATATTATCCATTTTGACCTGGGAGCAAACTACCTGA CCGACCAGGACTTCGGCAAGTTCTCGCCGATGCCCACCGTCACGTTCATGTCGCTCTACC TCAACTCCTTCAATGGCAGCTTCCCGGAGTTCGTCCTCAGGAGCGGCAACATCACCTACC TCGACCTGTCGCAGAATACTCTGTTCGGGAAGATACCGGACACGCTGCCGGAGAAGCTCC CGAATCTGAGGTACCTCAACCTGTCCATCAATGCGTTCTCCGGCTCGATTCCGGCGTCGC TCGGGAAGTTGATGAAGCTGCAGGACCTGCGGATGGCCGGCAACAATCTCACCGGCGGCA TCCCGGAGTTCCTTGGGTCGATGCCGCAATTGAGGATTCTTGAACTCGGCGACAACCAGC TCGGCGGGGCGATCCCGCCGGTTCTTGGCCGGCTCCAGATGCTGCAGCGGCTCGACATCA AGAACTCCGGCCTTGTCTCAACTCTGCCGTCGCAGCTGGGAAATCTGAAGAATCTCATTT TCTTCGAGCTGTCCTTGAACCGGCTCTCCGGTGGCTTGCCGCCGGAGTTCGCCGGGATGC GGGCAATGCGGTACTTCGGCATTTCCACGAACAACCTCACCGGTGAGATCCCGCCGGCGT TGTTCACGAGCTGGCCGGAGCTCATAGTGTTCCAAGTGCAGAACAACTCGTTGACCGGCA AAATTCCATCGGAGCTCAGCAAGGCAAGGAAACTGGAATTCCTTTACCTATTCAGCAACA ACCTTAGCGGTTCCATCCCGGTAGAGCTCGGCGAGCTGGAGAACCTGGTAGAGCTAGATT TGTCGGAGAACTCGCTCACCGGACCGATCCCCAGCTCGCTCGGCAAGCTCAAGCAACTCA CTAAGTTGGCGTTGTTCTTCAACAACCTCACCGGTACGATCCCACCTGAGATTGGCAACA TGACAGCGTTGCAAAGCTTCGACGTGAACACCAACCGTCTGCAAGGTGAGCTCCCTGCCA CCATCTCGTCCCTCAGGAACCTTCAGTACCTCTCCGTGTTCAACAACTACATGAGCGGCA CCATTCCGCCGGACCTCGGCAAGGGCATAGCCTTGCAGCACGTGAGCTTCACCAACAACA GCTTCTCCGGCGAGCTGCCGCGCCACATCTGCGACGGCTTCGCGCTGGACCAACTCACGG CGAACTACAACAACTTCACCGGCACGCTGCCGTTGTGCCTGAAGAATTGCACGGCGCTAT ACCGGGTCCGGCTGGAAGAGAACCACTTCACCGGCGACATCTCGGAGGCCTTCGGCGTCC ACCGCATCCTGCAATATTTGGACGTCTCCGGGAACAAGCTTACCGGTGAGCTGTCCTCTG ACTGGGGACAGTGCACCAACCTCACCTATCTGTCTATCAATGGTAACAGCATATCCGGCA ACCTTGATTCGACCTTTTGTAAATTGTCATCTCTTCAGTTTTTGGATCTATCGAATAACC GATTCAATGGTGAGCTCCCAAGTTGTTGGTGGGAGTTGCAAGCTTTACTGTTTATGGACA TCTCCGGCAACGACTTTTATGGTGAATTGCCAGCAACAGAAAGCCTTGAACTTCCTCTAC AATCGATGCATCTCGCTAACAATAGTTTCTCTGGAGTTTTCCCAAATATTGTTCGCAAAT GTGGAGCGCTTGTTACCCTAGATATGGGGAACAACAAGTTCTTTGGCCATATTCCCTCTT GGATTGGAATTAGTCTTCCTCTCCTAAGAATTCTTATCCTTCGATCAAATAATTTCAGTG GAGAGATTCCTACAGAATTATCCCAACTTTCTGAGCTTCAACTTCTTGACTTGGCCAGCA ACGTGTTAACTGGATTCATCCCAACAAGTTTTGGCAACTTATCATCCATGACACAAGCAA AAACCTTGCCAGCGACAGAATATTTTAACGCGGAAAGCAGTCCTTTTCAGCCAGAAGTAC CCCAGGTTCCCAAGCCTCACCGCAGAAGAGAACCCAAAAATCAGTCCCCTCTTGATCAGT CTAGAGACAGAGTTAGCATACAATGGAAGGGACATGAAGAAACTTTTCAAAGAACAGCTA TGTTAATGACAGGCATTGATTTATCAGGCAATTCACTTTACGGTGAAATCCCAAAAGAGC TAACATACCTTCGGGGCCTCCGGTTTTTGAACTTGTCATGGAACGATCTATCAGGCAGTA TTCCAGAAAGAATTGGCAATTTGAATATCTTGGAGTCCCTTGACTTGTCATGGAATGAGC TTTCAGGTGTTATCCCCGCAAGCATTTCAAATCTGTCATGCCTCAGTGTGTTAAATCTCT CAAACAACCACTTATGGGGAAGCATACCCACAGGAAGACAACTTCAGACATTTGTGGATC CCTCAATTTATAGCAACAATTTGGGCCTTTGTGGCTTCCCTTTGATAATAGCCTGCCAGG CATCTAGATTGGATGAGAAAAATGAAGATCATAAAGAACTTGATATATGTTTATTTTACT CTTTAATTCTTGGCATTGTTTTCGGGTTTTGGCTTTGGTTTGGAGTTCTAATTTTACTTA AGCCATTAAGAGTTTTTGTTTTTCATTCTGTTGACCACATAGAAAGAAGCTATGCAAATT GCAGAAGATGTATGCACTAAGTATTCTTCAGATGCAAATCAGCAACCAAATAATATGCCC CTGTTGCTTTTCCTCGACAGAATTATATGTCAATGTCATGATTTTCATTTATCTTCTCTG TCTTGCATTTACAAGTTTGCTTAGCCAATGGGAAAAATAATAATATTACACAGGGATAGA AGCAAGTAGCAACGAGGAATACAAAGTTGATGAAGGACAGAACTTTTGTGATTGATAGTC TTCAGAATAATTTCAGTACATGTATCACCAGTAATAGAGTACTATCCTAAGCTTGCCCCT GGCGTTAATCTAACAATGCATCTTAGCTGTGAAATTCCAACCGTTCCCGACGGCGCAACG GGTGACCTGGAGTCGCTCCAGCGAGCCATGGCGATCTTGCCAGTAAAAGAGAGGGTAAAG GAGATTCATCGCGTGTAGAAGGACGATGGTCACCTCAATTTCGGACGAAGGAACTCGGGT GCGGGAGAATTTTCGGGATTTGGTGGAGCCGGTGAAAGCTAGGGTTTTCGCCGCGTTTGC GTCCGGCGACGGCGATGGAGGAGGCGAAGCCCTGGGCGGCTCTCGGGCGGAGGTAGACGG GGCGGAGGCGGTCTCTTTTGCCGTTGGCGGCATAGCTCGAGCGCATGGAATGGAGGTCGA GCTTGTCGTCGGCTTGGTTTGTTGGCGCGGCAAAGCTTGGGATGAAGCAGAGGCAGAGCT ACTATTGCGTGGCTCGGCAAGGCGATGGAGAGCGGCC