Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0469300-00
CDS Infomation	cds chromosome:IRGSP-1.0:10:17346611:17349754:-1 gene:Os10g0469300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os10t0469300-00)
Sequence	ATGCAGGATCACTGCGTTGGTGTTTTACTCCGCATGGCCCCCGTCGTCCACCCTTTCTTC CTCCTCCCCCTCCTCGTGGCGATCGCTTCCATCCCAGGATCAGTCAATGCCGCAGCATCG TCCCAGCAGACCGACGCGCTACTGGCATGGAAGTCGAGCCTCGCTGACCCGGTCGCGCTG TCCGGCTGGACGCGGGCTTCGCCGGTCTGCACCTGGCGCGGCGTGGGCTGCGACGCCGCC GGCGGCGGCCGCGTCACGAAGCTGCGCCTCCGGGGACTGGGACTCGGCGGCGGCCTCCAC ACGCTCGAGCTCGACTTCGCCGCGTTCCCGGCGCTCACCGAGCTCGACCTCAACGGGAAC AGCTTCGCCGGCGACATCCCGGCCGGCATCTCGCAACTGCGCTCCCTTGCCTCGCTCGAC CTCGGCGACAACGGGTTCAACGGCTCCATCCCGCCGCAGATCGGCCACCTCTCCGGCCTC GTCGACCTCTGCCTCTACAACAACAACCTCGTTGGCGCCATCCCGCACCAGCTCAGCCGA CTCCCCAAGATTGCCCACTTCGACCTGGGAGCAAACTACCTGACCGACCAGGACTTCGCC AAGTTCTCGCCGATGCCCACCGTGACATTCATGTCGCTCTACGACAACTCCATCAATGGT AGCTTCCCGGACTTCATCCTCAAGAGCGGCAACATCACCTACCTCGACTTGTCGCAGAAT ACTCTGTTCGGGCTGATGCCGGACACACTGCCGGAGAAGCTCCCGAATCTGATGTACCTG AACTTGTCCAACAATGAATTCTCTGGCCGGATTCCGGCGTCGCTCAGGAGGTTAACGAAG CTCCAGGACCTGCTGATTGCCGCCAACAATCTCACCGGCGGCGTCCCAGAGTTCCTTGGG TCGATGTCACAGTTGAGGATTCTCGAACTTGGTGACAACCAGCTCGGCGGGGCGATCCCG CCGGTTCTTGGCCAGCTCCAGATGCTGCAGCGGCTCAAGATAAAGAACGCTGGGCTTGTT TCAACTCTGCCGCCGGAGCTGGGAAATCTTAAGAATCTCACTTTTCTAGAGATATCCGTG AACCACCTCTCCGGTGGCTTGCCCCCGGCATTCGCCGGGATGTGCGCAATGCGGGAGTTC GGACTTGAAATGAACGGGCTCACCGGTGAGATCCCTTCGGTGTTGTTCACGAGCTGGCCC GAGCTCATATCGTTCCAAGTACAGTACAACTTCTTCACTGGCAGGATTCCAAAAGAGGTC GGCATGGCGAGGAAACTGAAAATCCTTTACCTGTTCAGCAACAACCTTTGCGGATCCATC CCGGCAGAACTCGGCGATTTGGAGAATCTGGAAGAGCTGGATTTGTCAAACAACTTGCTG ACCGGACCGATCCCTAGATCAATCGGCAACCTCAAGCAGCTTACGGCTTTGGCGTTGTTC TTCAACGATCTCACCGGTGTAATCCCACCTGAGATTGGCAACATGACAGCGTTGCAAAGG TTGGACGTCAACACCAACCGTCTGCAAGGCGAGCTCCCTGCCACCATCTCGTCCCTCAGG AACCTTCAGTACCTCTCCGTGTTCAACAACTACATGAGTGGCACCATCCCGCCGGACCTC GGCAAGGGCATAGCCTTGCAGCACGTGAGCTTCACCAACAACAGCTTCTCCGGTGAGCTG CCGCGCCACATCTGCGACGGCTTCGCGCTGGAGCGCTTCACGGCGAACCACAACAACTTC AGCGGCACGCTACCGCCATGTCTGAAGAACTGCACAAGCCTATACCGGGTGCGGCTGGAC GGGAACCACTTCACCGGCGACATCTCAGATGCCTTCGGCATACACCCCAGCTTGGAATAC TTGGACATATCCGGGAGCAAGCTCACCGGTCGGCTATCGTCTGACTGGGGACAGTGCACC AACCTCACATATCTGTCAATCAACGGTAACAGCATATCCGGCAACCTTGATTCGACCTTT TGTACATTGTCATCTCTTCAGTTTTTGGATCTATCAAATAACCGATTCAATGGTGAGCTC CCAAGGTGTTGGTGGGAGTTGCAAGCTTTGCTGTTTATGGACGTCTCTGGCAACGGCTTC TCGGGTGAATTGCCAGCATCAAGAAGCCCTGAACTTCCTCTCCAATCTCTGCATCTTGCT AACAATAGTTTCTCTGTAGTTTTCCCAGCCACCATTCGCAACTGCAGAGCACTTGTTACG CTTGATATGTGGAGCAACAAGTTCTTTGGCAAGATTCCCTCTTGGATAGGAACTAGTCTT CCTGTCCTAAGAATTCTTCTCCTCCGATCAAATAATTTCAGTGGAGAGATTCCCACAGAA TTATCCCAACTTTCTCAGCTTCAACTTCTTGATTTGGCCAGCAATGGGTTAACTGGATTC ATCCCAACAACTTTTGCCAACTTATCATCCATGAAACAAGCAAAAACCTTCCCCACAATA GGGACTTTTAATTGGAAAAGTGCCCCTTCAAGAGGATACGATTATCCGTTCCCTCTTGAT CAGTCTAGAGACAGATTTAACATATTATGGAAGGGACATGAAGAAACTTTTCAAGGAACA GCTATGTTAATGACAGGAATTGATTTATCAAGCAATTCACTTTACGGTGAAATCCCAAAA GAGCTAACATACCTTCAGGGCCTCCGGTATCTAAACTTGTCAAGGAATGATCTTTCAGGC AGTATTCCAGAAAGAATTGGCAATTTGAATATCTTGGAATCCCTTGACTTATCATGGAAT GAGCTTTCAGGTGTTATCCCTACAACCATTGCAAATATACCATGCCTCAGTGTGTTAAAT CTCTCAAATAACCGCTTATGGGGAAGCATACCCACCGGAAGACAACTTCAGACATTTGTG GATCCCTCAATATATAGCAACAATTTGGGCCTTTGTGGCTTCCCTTTGAGAATAGCCTGC CGGGCATCTAGATTGGATCAGAGAATTGAAGATCATAAAGAACTTGATAAGTTCTTATTT TACTCTTTAGTTGTTGGCATTGTTTTCGGATTTTGGCTTTGGTTTGGAGCTCTAATTTTA CTTAAGCCATTAAGAGATTTTGTTTTTCATTTTGTTGACCACATAGAAAGAAGCTATGCA AATTGCAGAAGATGTACGCACTAA

Peptide Sequence

PEP ID	Os10t0469300-00
PEP Infomation	pep chromosome:IRGSP-1.0:10:17346611:17349754:-1 gene:Os10g0469300 transcript:Os10t0469300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os10t0469300-00)
Sequence	MQDHCVGVLLRMAPVVHPFFLLPLLVAIASIPGSVNAAASSQQTDALLAWKSSLADPVAL SGWTRASPVCTWRGVGCDAAGGGRVTKLRLRGLGLGGGLHTLELDFAAFPALTELDLNGN SFAGDIPAGISQLRSLASLDLGDNGFNGSIPPQIGHLSGLVDLCLYNNNLVGAIPHQLSR LPKIAHFDLGANYLTDQDFAKFSPMPTVTFMSLYDNSINGSFPDFILKSGNITYLDLSQN TLFGLMPDTLPEKLPNLMYLNLSNNEFSGRIPASLRRLTKLQDLLIAANNLTGGVPEFLG SMSQLRILELGDNQLGGAIPPVLGQLQMLQRLKIKNAGLVSTLPPELGNLKNLTFLEISV NHLSGGLPPAFAGMCAMREFGLEMNGLTGEIPSVLFTSWPELISFQVQYNFFTGRIPKEV GMARKLKILYLFSNNLCGSIPAELGDLENLEELDLSNNLLTGPIPRSIGNLKQLTALALF FNDLTGVIPPEIGNMTALQRLDVNTNRLQGELPATISSLRNLQYLSVFNNYMSGTIPPDL GKGIALQHVSFTNNSFSGELPRHICDGFALERFTANHNNFSGTLPPCLKNCTSLYRVRLD GNHFTGDISDAFGIHPSLEYLDISGSKLTGRLSSDWGQCTNLTYLSINGNSISGNLDSTF CTLSSLQFLDLSNNRFNGELPRCWWELQALLFMDVSGNGFSGELPASRSPELPLQSLHLA NNSFSVVFPATIRNCRALVTLDMWSNKFFGKIPSWIGTSLPVLRILLLRSNNFSGEIPTE LSQLSQLQLLDLASNGLTGFIPTTFANLSSMKQAKTFPTIGTFNWKSAPSRGYDYPFPLD QSRDRFNILWKGHEETFQGTAMLMTGIDLSSNSLYGEIPKELTYLQGLRYLNLSRNDLSG SIPERIGNLNILESLDLSWNELSGVIPTTIANIPCLSVLNLSNNRLWGSIPTGRQLQTFV DPSIYSNNLGLCGFPLRIACRASRLDQRIEDHKELDKFLFYSLVVGIVFGFWLWFGALIL LKPLRDFVFHFVDHIERSYANCRRCTH

Transcript Sequence

Transcript ID	Os10t0469300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:17346611:17349754:-1 gene:Os10g0469300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os10t0469300-00)
Sequence	ATGCAGGATCACTGCGTTGGTGTTTTACTCCGCATGGCCCCCGTCGTCCACCCTTTCTTC CTCCTCCCCCTCCTCGTGGCGATCGCTTCCATCCCAGGATCAGTCAATGCCGCAGCATCG TCCCAGCAGACCGACGCGCTACTGGCATGGAAGTCGAGCCTCGCTGACCCGGTCGCGCTG TCCGGCTGGACGCGGGCTTCGCCGGTCTGCACCTGGCGCGGCGTGGGCTGCGACGCCGCC GGCGGCGGCCGCGTCACGAAGCTGCGCCTCCGGGGACTGGGACTCGGCGGCGGCCTCCAC ACGCTCGAGCTCGACTTCGCCGCGTTCCCGGCGCTCACCGAGCTCGACCTCAACGGGAAC AGCTTCGCCGGCGACATCCCGGCCGGCATCTCGCAACTGCGCTCCCTTGCCTCGCTCGAC CTCGGCGACAACGGGTTCAACGGCTCCATCCCGCCGCAGATCGGCCACCTCTCCGGCCTC GTCGACCTCTGCCTCTACAACAACAACCTCGTTGGCGCCATCCCGCACCAGCTCAGCCGA CTCCCCAAGATTGCCCACTTCGACCTGGGAGCAAACTACCTGACCGACCAGGACTTCGCC AAGTTCTCGCCGATGCCCACCGTGACATTCATGTCGCTCTACGACAACTCCATCAATGGT AGCTTCCCGGACTTCATCCTCAAGAGCGGCAACATCACCTACCTCGACTTGTCGCAGAAT ACTCTGTTCGGGCTGATGCCGGACACACTGCCGGAGAAGCTCCCGAATCTGATGTACCTG AACTTGTCCAACAATGAATTCTCTGGCCGGATTCCGGCGTCGCTCAGGAGGTTAACGAAG CTCCAGGACCTGCTGATTGCCGCCAACAATCTCACCGGCGGCGTCCCAGAGTTCCTTGGG TCGATGTCACAGTTGAGGATTCTCGAACTTGGTGACAACCAGCTCGGCGGGGCGATCCCG CCGGTTCTTGGCCAGCTCCAGATGCTGCAGCGGCTCAAGATAAAGAACGCTGGGCTTGTT TCAACTCTGCCGCCGGAGCTGGGAAATCTTAAGAATCTCACTTTTCTAGAGATATCCGTG AACCACCTCTCCGGTGGCTTGCCCCCGGCATTCGCCGGGATGTGCGCAATGCGGGAGTTC GGACTTGAAATGAACGGGCTCACCGGTGAGATCCCTTCGGTGTTGTTCACGAGCTGGCCC GAGCTCATATCGTTCCAAGTACAGTACAACTTCTTCACTGGCAGGATTCCAAAAGAGGTC GGCATGGCGAGGAAACTGAAAATCCTTTACCTGTTCAGCAACAACCTTTGCGGATCCATC CCGGCAGAACTCGGCGATTTGGAGAATCTGGAAGAGCTGGATTTGTCAAACAACTTGCTG ACCGGACCGATCCCTAGATCAATCGGCAACCTCAAGCAGCTTACGGCTTTGGCGTTGTTC TTCAACGATCTCACCGGTGTAATCCCACCTGAGATTGGCAACATGACAGCGTTGCAAAGG TTGGACGTCAACACCAACCGTCTGCAAGGCGAGCTCCCTGCCACCATCTCGTCCCTCAGG AACCTTCAGTACCTCTCCGTGTTCAACAACTACATGAGTGGCACCATCCCGCCGGACCTC GGCAAGGGCATAGCCTTGCAGCACGTGAGCTTCACCAACAACAGCTTCTCCGGTGAGCTG CCGCGCCACATCTGCGACGGCTTCGCGCTGGAGCGCTTCACGGCGAACCACAACAACTTC AGCGGCACGCTACCGCCATGTCTGAAGAACTGCACAAGCCTATACCGGGTGCGGCTGGAC GGGAACCACTTCACCGGCGACATCTCAGATGCCTTCGGCATACACCCCAGCTTGGAATAC TTGGACATATCCGGGAGCAAGCTCACCGGTCGGCTATCGTCTGACTGGGGACAGTGCACC AACCTCACATATCTGTCAATCAACGGTAACAGCATATCCGGCAACCTTGATTCGACCTTT TGTACATTGTCATCTCTTCAGTTTTTGGATCTATCAAATAACCGATTCAATGGTGAGCTC CCAAGGTGTTGGTGGGAGTTGCAAGCTTTGCTGTTTATGGACGTCTCTGGCAACGGCTTC TCGGGTGAATTGCCAGCATCAAGAAGCCCTGAACTTCCTCTCCAATCTCTGCATCTTGCT AACAATAGTTTCTCTGTAGTTTTCCCAGCCACCATTCGCAACTGCAGAGCACTTGTTACG CTTGATATGTGGAGCAACAAGTTCTTTGGCAAGATTCCCTCTTGGATAGGAACTAGTCTT CCTGTCCTAAGAATTCTTCTCCTCCGATCAAATAATTTCAGTGGAGAGATTCCCACAGAA TTATCCCAACTTTCTCAGCTTCAACTTCTTGATTTGGCCAGCAATGGGTTAACTGGATTC ATCCCAACAACTTTTGCCAACTTATCATCCATGAAACAAGCAAAAACCTTCCCCACAATA GGGACTTTTAATTGGAAAAGTGCCCCTTCAAGAGGATACGATTATCCGTTCCCTCTTGAT CAGTCTAGAGACAGATTTAACATATTATGGAAGGGACATGAAGAAACTTTTCAAGGAACA GCTATGTTAATGACAGGAATTGATTTATCAAGCAATTCACTTTACGGTGAAATCCCAAAA GAGCTAACATACCTTCAGGGCCTCCGGTATCTAAACTTGTCAAGGAATGATCTTTCAGGC AGTATTCCAGAAAGAATTGGCAATTTGAATATCTTGGAATCCCTTGACTTATCATGGAAT GAGCTTTCAGGTGTTATCCCTACAACCATTGCAAATATACCATGCCTCAGTGTGTTAAAT CTCTCAAATAACCGCTTATGGGGAAGCATACCCACCGGAAGACAACTTCAGACATTTGTG GATCCCTCAATATATAGCAACAATTTGGGCCTTTGTGGCTTCCCTTTGAGAATAGCCTGC CGGGCATCTAGATTGGATCAGAGAATTGAAGATCATAAAGAACTTGATAAGTTCTTATTT TACTCTTTAGTTGTTGGCATTGTTTTCGGATTTTGGCTTTGGTTTGGAGCTCTAATTTTA CTTAAGCCATTAAGAGATTTTGTTTTTCATTTTGTTGACCACATAGAAAGAAGCTATGCA AATTGCAGAAGATGTACGCACTAA