Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0469000-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:17330457:17335301:-1 gene:Os10g0469000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os10t0469000-01);Similar to Leucine Rich Repeat family protein. (Os10t0469000-02)
Sequence	ATGGCCGGCGTCGTCTTCCTCGTCCTCTTCGTGGCGGCCGCCGCCATGCCAGCATCGGTC ACCGCAGCGACATCACAGACCGATGCGCTGCTGGCGTGGAAGGCCAGCCTGCTGCTGGGC GACGCGGCCGCGCTGTCCGGCTGGACGCGGGCCGCGCCGGTCTGCACCTGGCGCGGCGTG GCCTGCGACGCCGCCGGCCGCGTCACTTCGCTCCGGCTCCGGGACGCCGGTCTCAGCGGC GGCCTCGACACGCTCGACTTCGCGGCGCTCCCGGCGCTGACCGAGCTTGACCTCAACAGG AACAACTTCACCGGTCCCATCCCGGCCAGCATCTCGCGGCTGCGCTCCCTTTCTTTGCTC GATCTCGGCAGCAACTGGTTGGATGGCTCTATACCGCCGCAGCTCGGCGACCTCTCCGGC CTCGTCGAGCTTCGCCTCTACAACAACAACCTCGTCGGCGCCATCCCCCACCAGTTAAGC CGTCTCCCCAACATTGTCCATTTCGATCTGGGAGCAAACTACCTGACCGACCATGACTTC CGCAAGTTCTCGCCGATGCCCACCGTCACGTTCATGTCGCTCTACCTCAACTCCTTCAAT GGAAGCTTCCCGGAGTTCGTCCTCAGGAGCGGCAGCATCACCTACCTCGACCTGTCGCAG AATGCTCTGTTCGGGCCAATACCGGACATGCTCCCGAATCTGAGGTTCCTCAACCTGTCC TTCAATGCGTTCTCCGGCCCGATTCCGGCGTCGCTTGGGAGGTTGACGAAGCTCCAGGAC CTGCGAATGGCCGGCAACAATCTCACCGGCGGCGTCCCGGAGTTCCTCGGGTCGATGGCA CAGTTGAGGATTCTTGAGCTCGGGGACAACCAGCTCGGCGGTCCAATCCCGTCGGTTCTT GGCCAGCTCCAGATGCTTCAGAGGCTCGACATCAAGAACGCTAGCCTTGTTTCAACTTTG CCGCCTCAACTAGGCAATCTTAATAATCTCGCTTATCTGGACCTGTCCTTGAACCAGTTC TCCGGTGGGTTGCCGCCGACGTTTGCAGGGATGCGGGCAATGCAGGAGTTCGGCCTTTCC ACGACCAATGTCACTGGTGAGATCCCACCGGCGTTGTTCACGAGCTGGCCCGAGCTCATA TCCTTCGAAGTGCAGAACAACTCGTTCACCGGCAAGATTCCATCGGAGCTCGGCAAGGCG AGGAAACTGGAAATCCTTTACCTATTCCTGAACAACCTTAACGGTTCCATCCCGGCAGAG CTTGGCGAGTTGGAGAACCTGGTAGAGCTGGATTTGTCGGTGAACTCGCTCACCGGACCG ATCCCCAGCTCGCTCGGCAACCTCAAGCAGCTCATAAAGTTGGCGCTATTCTTCAACAAT CTCACCGGCGTAATCCCGCCGGAGATTGGCAACATGACGGCGTTGCAAAGCTTCGACGTC AACACCAACATTCTGCACGGCGAGCTGCCAGCCACCATCACGGCCCTCAAGAACCTCCAA TACCTCGCCGTGTTCGACAACTTCATGAGCGGCACCATCCCGCCGGACCTCGGCAAGGGC ATAGCCTTGCAGCACGTGAGCTTCAGCAACAACAGTTTCTCTGGCGAGCTGCCACGGAAC CTCTGCGACGGCTTCGCGCTGGAGCACTTCACGGTGAACTACAACAACTTCACCGGCACG CTGCCACCGTGCCTGAAGAACTGCACGGGGCTGTTCAGGGTTCGGCTAGAGGAGAACCAC TTCACCGGCGACATCTCGGAGGCCTTCGGCGTGCACCCCAGCCTGGAGTACCTGGACATC TCCGGCAACAAGCTTACTGGTGAGCTGTCCTCCGACTGGGGACAGTGTACCAACCTCACG CTCCTGAGCATGGACGGCAATCGCATATCCGGCCGCATTCCTGAAGCATTTGGGAGCATG ACAAGATTGCAGATTCTCAGCTTGGCTGGAAACAATCTGACAGGAGGTATTCCACTTGAT TTGGGTCATCTCAACCTTTTGTTCAATCTCAACCTGAGCCATAATTCCTTTTCCGGGCCT ATCCCGACAAGTTTGGGCAACAATTCTAAGCTACAGAAAATAGATATGTCAGGAAACATG CTTAATGGCACGATACCAGTTGCTCTTGGCAAGCTTGGTGCTCTGACATTTCTTGATTTG AGCAAGAACAGGTTGTCAGGGAAGATACCAAGGGAACTTGGTAATCTGGTTCAGCTGCAG ACCCTACTTGATTTGAGCAGCAATTTTTTATCGGGTTGGATCCCCCAGGCAGCCTTCTGC AAACTGCTCTCTCTTCAGATTCTGATCCTGTCGAACAACCAGCTGACTGGAAAACTGCCC GACTGCCTATGGTACTTGCAAAATCTGCAGTTCTTGGACCTTTCCAACAATGCATTCTCA GGTGAAATCCCTGCAGCAAAGGCAAGCTACAGTTGTTCCCTTATATCGATTCATCTTTCC AGCAATGACTTCACTGGAGTTTTTCCATCAGCGTTAGAGGGATGCAAGAAGTTGATCAAT TTAGATATTGGGAATAACAATTTTTTTGGTGATATTCCTATTTGGATTGGGAAAGGCCTT CCATCATTGAAGATTCTTAGCCTTAAATCAAACAACTTCAGTGGTGAAATTCCATCAGAG TTGTCACAGCTTTCTCAACTTCAACTGCTAGACATGACCAACAATGGTTTGACAGGGTTG ATTCCCAGATCTTTTGGTAAACTTACTTCCATGAAGAATCCAAAGCTTATATCTAGTCGG GAATTATTACAATGGTCTTTTAATCATGATAGAATCAATACAATCTGGAAGGGGAAGGAG CAAATATTTGAAATAAAGACTTATGCAATAGATATTCAATTAGTGACGGGTATCAGTTTG TCAGGTAACTCATTATCACAATGCATCCCTGATGAATTAATGAACCTCCAAGGCCTTCAA TTTCTGAACTTGTCAAGAAACTATCTGTCACGCAGCATACCTGAGAACATTGGTAGTTTG AAAAATCTTGAGTCTCTTGACCTATCATCAAACGAACTTTCAGGAGCCATTCCTCCAAGC CTTGCCGGTATATCTACCCTTAGCAGTCTGAATCTCTCGAATAATCATCTATCAGGCAAG ATATCCACCGGGAATCAACTTCAAACCCTCACTGACCCATCAATCTACAGCAACAATTCT GGGCTATGTGGCCTTCCGTTGAACATCTCATGCACAAATTATGCACTTGCATCAGACGAG AGATATTGTAGAACATGCGAGGACCAGTATCTATCGTACTTTGTGATGGCTGGAGTGGTT TTTGGGTCTTGGCTATGGTTTGGAATGTTATTTTCAATTGGGAACTTAAGGTATGCCGTT TTCTGCTTTGTTGATGACATTCAGCGTAAGGTTATGCAGAAGGTGTCCTGTATTAATCAA CTTCTTTCAAGAGGGAATACTGCCCAATATCTGTAG

Peptide Sequence

PEP ID	Os10t0469000-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:17330457:17335301:-1 gene:Os10g0469000 transcript:Os10t0469000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os10t0469000-01);Similar to Leucine Rich Repeat family protein. (Os10t0469000-02)
Sequence	MAGVVFLVLFVAAAAMPASVTAATSQTDALLAWKASLLLGDAAALSGWTRAAPVCTWRGV ACDAAGRVTSLRLRDAGLSGGLDTLDFAALPALTELDLNRNNFTGPIPASISRLRSLSLL DLGSNWLDGSIPPQLGDLSGLVELRLYNNNLVGAIPHQLSRLPNIVHFDLGANYLTDHDF RKFSPMPTVTFMSLYLNSFNGSFPEFVLRSGSITYLDLSQNALFGPIPDMLPNLRFLNLS FNAFSGPIPASLGRLTKLQDLRMAGNNLTGGVPEFLGSMAQLRILELGDNQLGGPIPSVL GQLQMLQRLDIKNASLVSTLPPQLGNLNNLAYLDLSLNQFSGGLPPTFAGMRAMQEFGLS TTNVTGEIPPALFTSWPELISFEVQNNSFTGKIPSELGKARKLEILYLFLNNLNGSIPAE LGELENLVELDLSVNSLTGPIPSSLGNLKQLIKLALFFNNLTGVIPPEIGNMTALQSFDV NTNILHGELPATITALKNLQYLAVFDNFMSGTIPPDLGKGIALQHVSFSNNSFSGELPRN LCDGFALEHFTVNYNNFTGTLPPCLKNCTGLFRVRLEENHFTGDISEAFGVHPSLEYLDI SGNKLTGELSSDWGQCTNLTLLSMDGNRISGRIPEAFGSMTRLQILSLAGNNLTGGIPLD LGHLNLLFNLNLSHNSFSGPIPTSLGNNSKLQKIDMSGNMLNGTIPVALGKLGALTFLDL SKNRLSGKIPRELGNLVQLQTLLDLSSNFLSGWIPQAAFCKLLSLQILILSNNQLTGKLP DCLWYLQNLQFLDLSNNAFSGEIPAAKASYSCSLISIHLSSNDFTGVFPSALEGCKKLIN LDIGNNNFFGDIPIWIGKGLPSLKILSLKSNNFSGEIPSELSQLSQLQLLDMTNNGLTGL IPRSFGKLTSMKNPKLISSRELLQWSFNHDRINTIWKGKEQIFEIKTYAIDIQLVTGISL SGNSLSQCIPDELMNLQGLQFLNLSRNYLSRSIPENIGSLKNLESLDLSSNELSGAIPPS LAGISTLSSLNLSNNHLSGKISTGNQLQTLTDPSIYSNNSGLCGLPLNISCTNYALASDE RYCRTCEDQYLSYFVMAGVVFGSWLWFGMLFSIGNLRYAVFCFVDDIQRKVMQKVSCINQ LLSRGNTAQYL

Transcript Sequence

Transcript ID	Os10t0469000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:17330457:17335301:-1 gene:Os10g0469000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os10t0469000-01);Similar to Leucine Rich Repeat family protein. (Os10t0469000-02)
Sequence	GTTCATCAACAATCACTATTCACAATATTTGTCTAACCGATACACAAAACCCGGGTTGAT CGAACCACTTTTCTAAATAATAAAATCAATTATCTCAAATACTAATTGTTCGTCATGAAA TAATAATGAAAAGACACTTTGTTCACACAAGTTGGCTGTTAAACAAACAGCATCATTTGC TCATCAGTCATCCCCGTGAACTAGTAGGTACACCGGACGGAAGATGAGTCAGCCATTCTA TTATCAGATCTGTCCTCGGAAGTCGGAATCTTTACTTACAAAATATTGACCGACCAGGAC CAGCATCTTTGGAGACGACACCAACGCGAGATCGCCACGTCGTGCCGATCAGCTCGATCG TGTGTTTTCCTCCGTCCGGCTCGCATGGCCGGCGTCGTCTTCCTCGTCCTCTTCGTGGCG GCCGCCGCCATGCCAGCATCGGTCACCGCAGCGACATCACAGACCGATGCGCTGCTGGCG TGGAAGGCCAGCCTGCTGCTGGGCGACGCGGCCGCGCTGTCCGGCTGGACGCGGGCCGCG CCGGTCTGCACCTGGCGCGGCGTGGCCTGCGACGCCGCCGGCCGCGTCACTTCGCTCCGG CTCCGGGACGCCGGTCTCAGCGGCGGCCTCGACACGCTCGACTTCGCGGCGCTCCCGGCG CTGACCGAGCTTGACCTCAACAGGAACAACTTCACCGGTCCCATCCCGGCCAGCATCTCG CGGCTGCGCTCCCTTTCTTTGCTCGATCTCGGCAGCAACTGGTTGGATGGCTCTATACCG CCGCAGCTCGGCGACCTCTCCGGCCTCGTCGAGCTTCGCCTCTACAACAACAACCTCGTC GGCGCCATCCCCCACCAGTTAAGCCGTCTCCCCAACATTGTCCATTTCGATCTGGGAGCA AACTACCTGACCGACCATGACTTCCGCAAGTTCTCGCCGATGCCCACCGTCACGTTCATG TCGCTCTACCTCAACTCCTTCAATGGAAGCTTCCCGGAGTTCGTCCTCAGGAGCGGCAGC ATCACCTACCTCGACCTGTCGCAGAATGCTCTGTTCGGGCCAATACCGGACATGCTCCCG AATCTGAGGTTCCTCAACCTGTCCTTCAATGCGTTCTCCGGCCCGATTCCGGCGTCGCTT GGGAGGTTGACGAAGCTCCAGGACCTGCGAATGGCCGGCAACAATCTCACCGGCGGCGTC CCGGAGTTCCTCGGGTCGATGGCACAGTTGAGGATTCTTGAGCTCGGGGACAACCAGCTC GGCGGTCCAATCCCGTCGGTTCTTGGCCAGCTCCAGATGCTTCAGAGGCTCGACATCAAG AACGCTAGCCTTGTTTCAACTTTGCCGCCTCAACTAGGCAATCTTAATAATCTCGCTTAT CTGGACCTGTCCTTGAACCAGTTCTCCGGTGGGTTGCCGCCGACGTTTGCAGGGATGCGG GCAATGCAGGAGTTCGGCCTTTCCACGACCAATGTCACTGGTGAGATCCCACCGGCGTTG TTCACGAGCTGGCCCGAGCTCATATCCTTCGAAGTGCAGAACAACTCGTTCACCGGCAAG ATTCCATCGGAGCTCGGCAAGGCGAGGAAACTGGAAATCCTTTACCTATTCCTGAACAAC CTTAACGGTTCCATCCCGGCAGAGCTTGGCGAGTTGGAGAACCTGGTAGAGCTGGATTTG TCGGTGAACTCGCTCACCGGACCGATCCCCAGCTCGCTCGGCAACCTCAAGCAGCTCATA AAGTTGGCGCTATTCTTCAACAATCTCACCGGCGTAATCCCGCCGGAGATTGGCAACATG ACGGCGTTGCAAAGCTTCGACGTCAACACCAACATTCTGCACGGCGAGCTGCCAGCCACC ATCACGGCCCTCAAGAACCTCCAATACCTCGCCGTGTTCGACAACTTCATGAGCGGCACC ATCCCGCCGGACCTCGGCAAGGGCATAGCCTTGCAGCACGTGAGCTTCAGCAACAACAGT TTCTCTGGCGAGCTGCCACGGAACCTCTGCGACGGCTTCGCGCTGGAGCACTTCACGGTG AACTACAACAACTTCACCGGCACGCTGCCACCGTGCCTGAAGAACTGCACGGGGCTGTTC AGGGTTCGGCTAGAGGAGAACCACTTCACCGGCGACATCTCGGAGGCCTTCGGCGTGCAC CCCAGCCTGGAGTACCTGGACATCTCCGGCAACAAGCTTACTGGTGAGCTGTCCTCCGAC TGGGGACAGTGTACCAACCTCACGCTCCTGAGCATGGACGGCAATCGCATATCCGGCCGC ATTCCTGAAGCATTTGGGAGCATGACAAGATTGCAGATTCTCAGCTTGGCTGGAAACAAT CTGACAGGAGGTATTCCACTTGATTTGGGTCATCTCAACCTTTTGTTCAATCTCAACCTG AGCCATAATTCCTTTTCCGGGCCTATCCCGACAAGTTTGGGCAACAATTCTAAGCTACAG AAAATAGATATGTCAGGAAACATGCTTAATGGCACGATACCAGTTGCTCTTGGCAAGCTT GGTGCTCTGACATTTCTTGATTTGAGCAAGAACAGGTTGTCAGGGAAGATACCAAGGGAA CTTGGTAATCTGGTTCAGCTGCAGACCCTACTTGATTTGAGCAGCAATTTTTTATCGGGT TGGATCCCCCAGGCAGCCTTCTGCAAACTGCTCTCTCTTCAGATTCTGATCCTGTCGAAC AACCAGCTGACTGGAAAACTGCCCGACTGCCTATGGTACTTGCAAAATCTGCAGTTCTTG GACCTTTCCAACAATGCATTCTCAGGTGAAATCCCTGCAGCAAAGGCAAGCTACAGTTGT TCCCTTATATCGATTCATCTTTCCAGCAATGACTTCACTGGAGTTTTTCCATCAGCGTTA GAGGGATGCAAGAAGTTGATCAATTTAGATATTGGGAATAACAATTTTTTTGGTGATATT CCTATTTGGATTGGGAAAGGCCTTCCATCATTGAAGATTCTTAGCCTTAAATCAAACAAC TTCAGTGGTGAAATTCCATCAGAGTTGTCACAGCTTTCTCAACTTCAACTGCTAGACATG ACCAACAATGGTTTGACAGGGTTGATTCCCAGATCTTTTGGTAAACTTACTTCCATGAAG AATCCAAAGCTTATATCTAGTCGGGAATTATTACAATGGTCTTTTAATCATGATAGAATC AATACAATCTGGAAGGGGAAGGAGCAAATATTTGAAATAAAGACTTATGCAATAGATATT CAATTAGTGACGGGTATCAGTTTGTCAGGTAACTCATTATCACAATGCATCCCTGATGAA TTAATGAACCTCCAAGGCCTTCAATTTCTGAACTTGTCAAGAAACTATCTGTCACGCAGC ATACCTGAGAACATTGGTAGTTTGAAAAATCTTGAGTCTCTTGACCTATCATCAAACGAA CTTTCAGGAGCCATTCCTCCAAGCCTTGCCGGTATATCTACCCTTAGCAGTCTGAATCTC TCGAATAATCATCTATCAGGCAAGATATCCACCGGGAATCAACTTCAAACCCTCACTGAC CCATCAATCTACAGCAACAATTCTGGGCTATGTGGCCTTCCGTTGAACATCTCATGCACA AATTATGCACTTGCATCAGACGAGAGATATTGTAGAACATGCGAGGACCAGTATCTATCG TACTTTGTGATGGCTGGAGTGGTTTTTGGGTCTTGGCTATGGTTTGGAATGTTATTTTCA ATTGGGAACTTAAGGTATGCCGTTTTCTGCTTTGTTGATGACATTCAGCGTAAGGTTATG CAGAAGGTGTCCTGTATTAATCAACTTCTTTCAAGAGGGAATACTGCCCAATATCTGTAG CTGTGTTTCCTTAACCTTCTGATGATGAAGTATGTGCTTCCTTTGTATTAAGAGTAAGAA AAATGTAATTGGAAGGGACCTTCAGGGCCTCTGGTTTTTAAACTTGTCAGGGAATAATCT ATCACGCATGTGTTCCAGAAAGAATTGGCAATTACTATATCTTGGGAGTCCCTTGACTTA ATTATGCATTGAGCTTTCAGGTGGCTTCTCTTTGAGAACAGCCTGCCATGGACCTCAATT TCGGACCAAGGAACTCGGGTGCGGGCGAATTCTCGGGATTTGGTGGAGCCGGTGAAAGCT AGGGTATTCGCCGCGTTTGCGCCCGGGCGACGGCGGTGGAGGAGGCGAAGTGTTGTGCGG CTCTTGGGCGGAGGCGGCCGTCTCTTTTGCTGTTGGCGGCGGCTTGATCAGTTATTCGGT GAGAGAGATTGAGGTGGATGCGGCAGAGCTCCTCGCTCCTCGGCTTGGCTTGCTGCCGCT GCGAAGCTTTGGAGGGGGGTCTCATGCAGCACAAGCTGCTGCTCACGGTCCAGACTGAGC TGGCAG