Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0468500-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:17312261:17316877:1 gene:Os10g0468500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os10t0468500-01);Hypothetical conserved gene. (Os10t0468500-02)
Sequence	ATGCCGCGGAGACACGACGCCCTCCGCCTGCTGCTGCTGGTGGTGGTGGTCGCCGCGGCG GATGCGGCGACGGAGGCCGACGCGCTGCTGGCGTGGAAGGCCGGCCTGCAGGACGGCGCG GCCGCGCTGTCCGGGTGGAGCCGCGCCGCGCCGGTGTGCGCGTGGCGCGGCGTGGCCTGC GACGCCGCCGCCGGCGGCGCCCGCGTCACTTCGCTCCGGCTCAGGGGCGCCGGCCTTGGC GGCGGCCTCGACGCGCTCGACTTCGCGGCGCTCCCGGCGCTGGCCGAGCTCGACCTCAAC GGGAACAACTTCACCGGCGCCATCCCGGCGAGCATCTCGCGGCTCCGCTCGCTGGCCTCG CTCGACCTCGGCAACAATGGCTTCAGCGACTCCATCCCGCCGCAGCTCGGCGACCTCTCC GGCCTCGTCGACCTCCGCCTCTACAACAACAACCTCGTCGGCGCCATCCCGCACCAGCTC AGCCGCCTCCCCAAGGTTGCCCACTTCGACCTGGGAGCAAACTACCTCACCGACGAGGAC TTCGCCAAGTTCTCGCCGATGCCCACCGTCACGTTCATGTCGCTCTACCTCAACTCCTTC AATGGCAGCTTCCCGGAGTTCATCCTCAAAAGCGGCAACGTCACCTACCTCGACCTGTCG CAGAACACTCTGTTCGGGAAGATACCGGACACGCTGCCGGAGAAGCTCCCGAATCTGAGG TACCTCAACCTGTCCATCAATGCGTTCTCCGGCCCGATTCCGGCGTCGCTTGGGAAGTTG ACGAAGCTGCAGGACCTGCGGATGGCCGCCAACAATCTCACCGGCGGCGTCCCGGAGTTC CTCGGGTCGATGCCGCAGTTGAGGATTCTTGAACTCGGCGACAACCAGCTCGGCGGGCCG ATCCCGCCGGTTCTTGGCCAGCTCCAGATGCTGCAGCGGCTCGACATCAAGAACTCGGGG CTCTCTTCAACTCTGCCGTCGCAGCTGGGAAATCTGAAGAATCTCATTTTCTTCGAGCTG TCCTTGAACCAGCTCTCCGGTGGCTTGCCGCCGGAGTTCGCCGGGATGCGGGCAATGCGG TACTTCGGCATTTCCACGAACAACCTCACCGGTGAGATCCCGCCGGTGTTGTTCACGAGC TGGCCGGAGCTCATATCCTTCCAAGTGCAGAACAACTCGTTGACAGGCAAGATTCCGCCG GAGCTCGGCAAGGCGAGCAAACTGAACATCCTCTACCTATTCACCAACAAGTTTACGGGC TCCATTCCGGCAGAGCTCGGCGAGCTGGAGAACCTGACAGAGCTGGATTTGTCGGTGAAC TCGCTCACCGGACCGATCCCCAGCTCGTTCGGCAACCTCAAGCAGCTCACAAAGTTGGCG CTATTCTTCAACAATCTCACCGGCGTAATCCCGCCGGAGATTGGCAACATGACGGCGTTG CAAAGCCTCGACGTCAACACCAACAGTCTGCACGGCGAGCTGCCAGCCACCATCACGGCC CTGAGGAGCCTCCAGTACCTCGCCGTGTTCGACAACCACATGAGCGGCACCATCCCGGCG GACCTCGGCAAGGGCCTGGCCTTGCAGCACGTGAGCTTCACCAACAACAGCTTCTCCGGC GAGCTGCCGCGCCACATCTGCGACGGCTTCGCGCTGGACCACCTCACGGCGAACTACAAC AACTTCACCGGCGCGCTGCCGCCGTGCCTGAAGAACTGCACGGCGCTGGTCCGTGTCCGG CTGGAGGAGAACCACTTCACCGGCGACATCTCGGAGGCCTTCGGCGTGCACCCCAAGCTG GTGTACCTGGACGTCTCCGGGAACAAGCTCACCGGCGAGCTGTCGTCTGCCTGGGGACAG TGCATCAACCTCACACTCCTGCATCTCGACGGCAATCGCATATCCGGCGGCATTCCGGCG GCATTTGGGAGCATGACAAGCTTGAAGGATCTCAATTTGGCTGGAAATAATCTGACAGGA GGGATTCCACCTGTGTTGGGAAATATCAGGGTCTTCAATCTCAACCTGAGCCATAACTCC TTTTCCGGGCCGATTCCGGCGAGCTTGAGCAACAATTCCAAGCTTCAGAAAGTCGATTTC TCAGGGAACATGCTTGATGGGACGATACCAGTTGCCATTAGCAAGCTTGATGCTCTGATA TTGCTTGATTTGAGCAAGAACAGGTTGTCAGGGGAGATACCAAGTGAGCTTGGTAATCTG GCTCAGCTGCAGATCCTGCTTGATTTGAGCAGCAATTCTCTATCAGGCGCGATCCCTCCA AATCTTGAGAAGCTGATAACTCTGCAGAGACTGAACTTATCACACAATGAGCTCAGTGGT TCGATCCCGGCAGGGTTTTCTCGCATGTCAAGCCTCGAATCAGTTGATTTCTCTTATAAT CGACTCACCGGGAGTATACCGTCAGGGAATGTTTTCCAGAATGCTTCAGCTTCTGCATAT GTTGGGAATTCGGGGCTCTGTGGTGATGTGCAAGGTCTAACTCCTTGTGACATCAGTTCT ACCGGATCATCTTCTGGGCATCACAAGAGAGTAGTCATTGCAACAGTTGTGTCAGTAGTT GGAGTGGTGTTACTACTAGCCGTTGTTACTTGCATCATACTGTTATGCAGGAGGAGGCCT AGAGAGAAGAAAGAGGTGGAATCTAACACCAATTATTCATATGAGTCCACAATCTGGGAA AAGGAAGGCAAGTTCACATTCTTCGACATCGTGAACGCCACGGACAACTTCAATGAAACC TTCTGCATCGGCAAAGGAGGGTTCGGAAGTGTCTACCGGGCTGAGCTCTCCAGTGGGCAG GTTGTGGCCGTCAAACGCTTCCATGTCGCCGACACGGGTGACATACCGGATGTGAACAAG AAGAGCTTCGAGAACGAGATCAAGGCGCTGACGGAGGTCCGCCACCGCAACATTGTCAAG CTCCATGGCTTCTGCACCAGTGGTGACTACATGTACCTGGTGTATGAGTACTTGGAAAGG GGCAGCTTGGGGAAGACATTGTATGGGGAGGAAGGGAAGAAGAAGATGGATTGGGGCATG AGGGTGAAGGTGGTGCAGGGGCTGGCTCATGCCCTGGCTTACTTGCATCATGACTGCAAT CCAGCCATCGTTCATCGTGATATTACTGTTAATAATATCCTGCTTGAGTCAGACTTTGAG CCGCGCTTGTGTGATTTTGGCACGGCGAAGTTGCTTGGGGGTGCATCGACGAACTGGACT TCTGTGGCAGGATCATATGGATACATGGCTCCAGAATTCGCATACACGATGAGGGTGACG GAGAAGTGCGATGTGTATAGCTTTGGCGTGGTTGCGCTAGAGGTCATGATGGGAAAGCAC CCAGGTGACCTCTTAACATCCCTGCCAGCCATCTCATCATCAGAAGAAGATGATCTACTG CTCAAGGACATACTAGACCAGCGGCTGGATGCTCCAACAGGGCAGCTCGCAGAAGAGGTC GTGTTCATCGTGAGAATCGCGCTTGGTTGCACAAGGGTGAACCCTGAATCCAGGCCTTCC ATGAGATCTGTAGCGCAGGAGATTTCTGCGCATACTCAAGCCTACCTCTCTGAACCATTC AAACTGATCACAATTAGCAAGCTAACAGACTACCAGAAGTGA

Peptide Sequence

PEP ID	Os10t0468500-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:17312261:17316877:1 gene:Os10g0468500 transcript:Os10t0468500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os10t0468500-01);Hypothetical conserved gene. (Os10t0468500-02)
Sequence	MPRRHDALRLLLLVVVVAAADAATEADALLAWKAGLQDGAAALSGWSRAAPVCAWRGVAC DAAAGGARVTSLRLRGAGLGGGLDALDFAALPALAELDLNGNNFTGAIPASISRLRSLAS LDLGNNGFSDSIPPQLGDLSGLVDLRLYNNNLVGAIPHQLSRLPKVAHFDLGANYLTDED FAKFSPMPTVTFMSLYLNSFNGSFPEFILKSGNVTYLDLSQNTLFGKIPDTLPEKLPNLR YLNLSINAFSGPIPASLGKLTKLQDLRMAANNLTGGVPEFLGSMPQLRILELGDNQLGGP IPPVLGQLQMLQRLDIKNSGLSSTLPSQLGNLKNLIFFELSLNQLSGGLPPEFAGMRAMR YFGISTNNLTGEIPPVLFTSWPELISFQVQNNSLTGKIPPELGKASKLNILYLFTNKFTG SIPAELGELENLTELDLSVNSLTGPIPSSFGNLKQLTKLALFFNNLTGVIPPEIGNMTAL QSLDVNTNSLHGELPATITALRSLQYLAVFDNHMSGTIPADLGKGLALQHVSFTNNSFSG ELPRHICDGFALDHLTANYNNFTGALPPCLKNCTALVRVRLEENHFTGDISEAFGVHPKL VYLDVSGNKLTGELSSAWGQCINLTLLHLDGNRISGGIPAAFGSMTSLKDLNLAGNNLTG GIPPVLGNIRVFNLNLSHNSFSGPIPASLSNNSKLQKVDFSGNMLDGTIPVAISKLDALI LLDLSKNRLSGEIPSELGNLAQLQILLDLSSNSLSGAIPPNLEKLITLQRLNLSHNELSG SIPAGFSRMSSLESVDFSYNRLTGSIPSGNVFQNASASAYVGNSGLCGDVQGLTPCDISS TGSSSGHHKRVVIATVVSVVGVVLLLAVVTCIILLCRRRPREKKEVESNTNYSYESTIWE KEGKFTFFDIVNATDNFNETFCIGKGGFGSVYRAELSSGQVVAVKRFHVADTGDIPDVNK KSFENEIKALTEVRHRNIVKLHGFCTSGDYMYLVYEYLERGSLGKTLYGEEGKKKMDWGM RVKVVQGLAHALAYLHHDCNPAIVHRDITVNNILLESDFEPRLCDFGTAKLLGGASTNWT SVAGSYGYMAPEFAYTMRVTEKCDVYSFGVVALEVMMGKHPGDLLTSLPAISSSEEDDLL LKDILDQRLDAPTGQLAEEVVFIVRIALGCTRVNPESRPSMRSVAQEISAHTQAYLSEPF KLITISKLTDYQK

Transcript Sequence

Transcript ID	Os10t0468500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:17312261:17316877:1 gene:Os10g0468500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os10t0468500-01);Hypothetical conserved gene. (Os10t0468500-02)
Sequence	GGCGACCAACCAGGCTGCCTCCAAAGCAGCCAAACCCAAGCCACTGACCCGCCGCCGCTA GATCTCGCCAATGCCGCGGAGACACGACGCCCTCCGCCTGCTGCTGCTGGTGGTGGTGGT CGCCGCGGCGGATGCGGCGACGGAGGCCGACGCGCTGCTGGCGTGGAAGGCCGGCCTGCA GGACGGCGCGGCCGCGCTGTCCGGGTGGAGCCGCGCCGCGCCGGTGTGCGCGTGGCGCGG CGTGGCCTGCGACGCCGCCGCCGGCGGCGCCCGCGTCACTTCGCTCCGGCTCAGGGGCGC CGGCCTTGGCGGCGGCCTCGACGCGCTCGACTTCGCGGCGCTCCCGGCGCTGGCCGAGCT CGACCTCAACGGGAACAACTTCACCGGCGCCATCCCGGCGAGCATCTCGCGGCTCCGCTC GCTGGCCTCGCTCGACCTCGGCAACAATGGCTTCAGCGACTCCATCCCGCCGCAGCTCGG CGACCTCTCCGGCCTCGTCGACCTCCGCCTCTACAACAACAACCTCGTCGGCGCCATCCC GCACCAGCTCAGCCGCCTCCCCAAGGTTGCCCACTTCGACCTGGGAGCAAACTACCTCAC CGACGAGGACTTCGCCAAGTTCTCGCCGATGCCCACCGTCACGTTCATGTCGCTCTACCT CAACTCCTTCAATGGCAGCTTCCCGGAGTTCATCCTCAAAAGCGGCAACGTCACCTACCT CGACCTGTCGCAGAACACTCTGTTCGGGAAGATACCGGACACGCTGCCGGAGAAGCTCCC GAATCTGAGGTACCTCAACCTGTCCATCAATGCGTTCTCCGGCCCGATTCCGGCGTCGCT TGGGAAGTTGACGAAGCTGCAGGACCTGCGGATGGCCGCCAACAATCTCACCGGCGGCGT CCCGGAGTTCCTCGGGTCGATGCCGCAGTTGAGGATTCTTGAACTCGGCGACAACCAGCT CGGCGGGCCGATCCCGCCGGTTCTTGGCCAGCTCCAGATGCTGCAGCGGCTCGACATCAA GAACTCGGGGCTCTCTTCAACTCTGCCGTCGCAGCTGGGAAATCTGAAGAATCTCATTTT CTTCGAGCTGTCCTTGAACCAGCTCTCCGGTGGCTTGCCGCCGGAGTTCGCCGGGATGCG GGCAATGCGGTACTTCGGCATTTCCACGAACAACCTCACCGGTGAGATCCCGCCGGTGTT GTTCACGAGCTGGCCGGAGCTCATATCCTTCCAAGTGCAGAACAACTCGTTGACAGGCAA GATTCCGCCGGAGCTCGGCAAGGCGAGCAAACTGAACATCCTCTACCTATTCACCAACAA GTTTACGGGCTCCATTCCGGCAGAGCTCGGCGAGCTGGAGAACCTGACAGAGCTGGATTT GTCGGTGAACTCGCTCACCGGACCGATCCCCAGCTCGTTCGGCAACCTCAAGCAGCTCAC AAAGTTGGCGCTATTCTTCAACAATCTCACCGGCGTAATCCCGCCGGAGATTGGCAACAT GACGGCGTTGCAAAGCCTCGACGTCAACACCAACAGTCTGCACGGCGAGCTGCCAGCCAC CATCACGGCCCTGAGGAGCCTCCAGTACCTCGCCGTGTTCGACAACCACATGAGCGGCAC CATCCCGGCGGACCTCGGCAAGGGCCTGGCCTTGCAGCACGTGAGCTTCACCAACAACAG CTTCTCCGGCGAGCTGCCGCGCCACATCTGCGACGGCTTCGCGCTGGACCACCTCACGGC GAACTACAACAACTTCACCGGCGCGCTGCCGCCGTGCCTGAAGAACTGCACGGCGCTGGT CCGTGTCCGGCTGGAGGAGAACCACTTCACCGGCGACATCTCGGAGGCCTTCGGCGTGCA CCCCAAGCTGGTGTACCTGGACGTCTCCGGGAACAAGCTCACCGGCGAGCTGTCGTCTGC CTGGGGACAGTGCATCAACCTCACACTCCTGCATCTCGACGGCAATCGCATATCCGGCGG CATTCCGGCGGCATTTGGGAGCATGACAAGCTTGAAGGATCTCAATTTGGCTGGAAATAA TCTGACAGGAGGGATTCCACCTGTGTTGGGAAATATCAGGGTCTTCAATCTCAACCTGAG CCATAACTCCTTTTCCGGGCCGATTCCGGCGAGCTTGAGCAACAATTCCAAGCTTCAGAA AGTCGATTTCTCAGGGAACATGCTTGATGGGACGATACCAGTTGCCATTAGCAAGCTTGA TGCTCTGATATTGCTTGATTTGAGCAAGAACAGGTTGTCAGGGGAGATACCAAGTGAGCT TGGTAATCTGGCTCAGCTGCAGATCCTGCTTGATTTGAGCAGCAATTCTCTATCAGGCGC GATCCCTCCAAATCTTGAGAAGCTGATAACTCTGCAGAGACTGAACTTATCACACAATGA GCTCAGTGGTTCGATCCCGGCAGGGTTTTCTCGCATGTCAAGCCTCGAATCAGTTGATTT CTCTTATAATCGACTCACCGGGAGTATACCGTCAGGGAATGTTTTCCAGAATGCTTCAGC TTCTGCATATGTTGGGAATTCGGGGCTCTGTGGTGATGTGCAAGGTCTAACTCCTTGTGA CATCAGTTCTACCGGATCATCTTCTGGGCATCACAAGAGAGTAGTCATTGCAACAGTTGT GTCAGTAGTTGGAGTGGTGTTACTACTAGCCGTTGTTACTTGCATCATACTGTTATGCAG GAGGAGGCCTAGAGAGAAGAAAGAGGTGGAATCTAACACCAATTATTCATATGAGTCCAC AATCTGGGAAAAGGAAGGCAAGTTCACATTCTTCGACATCGTGAACGCCACGGACAACTT CAATGAAACCTTCTGCATCGGCAAAGGAGGGTTCGGAAGTGTCTACCGGGCTGAGCTCTC CAGTGGGCAGGTTGTGGCCGTCAAACGCTTCCATGTCGCCGACACGGGTGACATACCGGA TGTGAACAAGAAGAGCTTCGAGAACGAGATCAAGGCGCTGACGGAGGTCCGCCACCGCAA CATTGTCAAGCTCCATGGCTTCTGCACCAGTGGTGACTACATGTACCTGGTGTATGAGTA CTTGGAAAGGGGCAGCTTGGGGAAGACATTGTATGGGGAGGAAGGGAAGAAGAAGATGGA TTGGGGCATGAGGGTGAAGGTGGTGCAGGGGCTGGCTCATGCCCTGGCTTACTTGCATCA TGACTGCAATCCAGCCATCGTTCATCGTGATATTACTGTTAATAATATCCTGCTTGAGTC AGACTTTGAGCCGCGCTTGTGTGATTTTGGCACGGCGAAGTTGCTTGGGGGTGCATCGAC GAACTGGACTTCTGTGGCAGGATCATATGGATACATGGCTCCAGAATTCGCATACACGAT GAGGGTGACGGAGAAGTGCGATGTGTATAGCTTTGGCGTGGTTGCGCTAGAGGTCATGAT GGGAAAGCACCCAGGTGACCTCTTAACATCCCTGCCAGCCATCTCATCATCAGAAGAAGA TGATCTACTGCTCAAGGACATACTAGACCAGCGGCTGGATGCTCCAACAGGGCAGCTCGC AGAAGAGGTCGTGTTCATCGTGAGAATCGCGCTTGGTTGCACAAGGGTGAACCCTGAATC CAGGCCTTCCATGAGATCTGTAGCGCAGGAGATTTCTGCGCATACTCAAGCCTACCTCTC TGAACCATTCAAACTGATCACAATTAGCAAGCTAACAGACTACCAGAAGTGAATATATAT CTGTGCAGAGATGTAAAGCACCAGGAGGGGAGGAAGGGAACTTCGCAGTTAGTGATTTGT AAGATGCATCCTCAGATTATATTAATGCCAAGGGTAAGCTTAGGATAGTATATTACATTA ACTGCTGATAAATATATAGAAATTATTCTGTACACTGAATCACAAAACCTGTCTTTCATC AACTTTGTACAATTGTATTGCTCGTTGTTACTATCCCTGTGGTAATATTATTATTTTCCC CCATAGGCTAAACAATAAACTTGTAAATGTAAGACAGAGAAGAGAAATGGAGAAATTTAT GACTTTGCCAT