Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0467800-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:17262050:17266561:1 gene:Os10g0467800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE A7 description:Secondary wall-specific cellulose synthase, Secondary cell wall formation (Os10t0467800-01)
Sequence	ATGGACACCGCCTCCGTCACCGGTGGCGAGCACAAGGGGAAGGAGAAGACGTGCCGGGTG TGCGGCGAGGAGGTGGCGGCGAGGGAGGACGGGAAGCCGTTCGTGGCGTGCGCCGAGTGC GGCTTCCCGGTGTGCAAGCCCTGCTACGAGTACGAGCGCAGCGAGGGCACCCAGTGCTGC CCCCAGTGCAACACCCGCTACAAGCGCCACAAAGGGTGCCCACGGGTGGAAGGCGACGAG GACGACGGCGGCGACATGGACGACTTCGAGGAGGAGTTCCAGATCAAGAGCCCCACCAAG CAGAAACCCCCCCACGAGCCCGTCAACTTCGACGTCTACTCGGAGAACGGCGAGCAGCCG GCACAGAAGTGGCGCCCTGGAGGCCCGGCGCTCTCTTCCTTCACCGGAAGCGTGGCTGGG AAGGATCTGGAGCAGGAGAGGGAGATGGAGGGTGGCATGGAGTGGAAGGACAGGATCGAC AAGTGGAAGACGAAGCAGGAGAAGCGGGGCAAGCTCAACCGCGACGACAGCGACGACGAC GACGACAAGAACGACGACGAGTACATGCTGCTCGCGGAGGCGAGGCAGCCGCTGTGGAGG AAGGTGCCGATCCCGTCGAGCAAGATCAACCCGTACCGGATCGTGATCGTGCTCCGGCTG GTGGTGCTCTGCTTCTTCCTCAAGTTCCGGATCACGACGCCGGCGATGGACGCGGTGCCG CTGTGGCTGGCCTCGGTGATCTGCGAGCTGTGGTTCGCGCTGTCGTGGATCCTCGACCAG CTGCCCAAGTGGTCGCCGGTGACGAGGGAGACGTACCTGGACCGGCTGGCCCTCCGGTAC GAGCGCGACGGCGAGCCGTGCCGCCTGGCCCCGATCGATTTCTTCGTCAGCACGGTGGAC CCGCTCAAGGAGCCGCCCATCATCACCGCCAACACCGTGCTGTCCATCCTCGCCGTCGAC TACCCCGTCGACCGCGTCTCCTGCTACGTCTCCGACGACGGCGCGTCCATGCTGCTCTTC GACACGCTCTCCGAGACCGCCGAGTTCGCCCGCCGGTGGGTCCCCTTCTGCAAGAAGTTC ACCATCGAGCCCCGCGCCCCCGAGTTCTACTTCTCCCAGAAGATCGACTACCTCAAGGAC AAGGTCCAGCCCACCTTCGTCAAAGAACGCCGCGCCATGAAGAGAGAGTATGAGGAGTTC AAGGTGAGGATAAACGCGCTGGTGGCGAAGGCGCAGAAGAAGCCGGAGGAAGGGTGGGTG ATGCAGGACGGGACGCCATGGCCGGGGAACAACACGAGGGACCACCCGGGGATGATCCAG GTGTACCTGGGCAGCCAGGGCGCGCTCGACGTCGAGGGCAGCGAGCTGCCGCGGCTGGTG TACGTGTCCCGCGAGAAGCGGCCCGGCTACAACCACCACAAGAAGGCCGGCGCCATGAAC TCCCTCGTTCGCGTCTCCGCCGTGCTTACCAACGCCCCCTTCATCCTCAACCTCGACTGC GACCACTACGTCAACAACAGCAAGGCCGTCCGCGAGGCCATGTGCTTCCTCATGGACAAG CAGCTCGGCAAGAAGCTGTGCTACGTCCAGTTCCCCCAGCGCTTCGACGGCATCGACCGC CACGATCGCTACGCCAACCGCAACACCGTCTTCTTCGACATCAACATGAAGGGGCTGGAC GGGATACAGGGGCCGGTGTACGTGGGGACGGGGACGGTGTTCAACAGGCAGGCGCTGTAC GGATACGACCCGCCGCGGCCGGAGAAGAGGCCGAAGATGACGTGCGACTGCTGGCCGTCG TGGTGCTGCTGCTGCTGCTGCTTCGGCGGGGGGAAGCGCGGCAAGTCGCACAAGAACAAG AAGGGCGGCGGCGGCGGCGAGGGCGGCGGCCTCGACGAGCCGCGCCGCGGGCTGCTCGGG TTCTACAAGAAGAGGAGCAAGAAGGACAAGCTCGGCGGCGGCGCGGCGTCGCTCGCCGGA GGGAAGAAAGGGTACCGGAAGCACCAGCGCGGGTTCGAGCTGGAGGAGATCGAGGAGGGC CTCGAGGGGTACGACGAGCTGGAGCGCTCGTCGCTCATGTCGCAGAAGAGCTTCGAGAAG CGGTTCGGCCAGTCGCCGGTGTTCATCGCCTCCACCCTCGTCGAGGACGGCGGCCTCCCC CAGGGCGCCGCCGCCGACCCCGCCGCCCTCATCAAGGAGGCCATCCACGTCATCAGCTGC GGCTACGAGGAGAAGACCGAGTGGGGCAAGGAGATTGGGTGGATCTACGGGTCGGTGACG GAGGACATCTTAACGGGGTTCAAGATGCATTGCCGTGGGTGGAAGTCGGTGTACTGCACG CCGGCGAGGGCGGCATTCAAGGGGTCGGCGCCCATCAACCTGTCGGATCGTCTGCACCAG GTGCTCCGGTGGGCGCTCGGCTCCGTCGAGATCTTCATGAGCCGCCATTGCCCGCTCTGG TACGCCTATGGCGGCCGCCTCAAGTGGCTCGAGCGCTTCGCCTACACCAACACCATCGTC TACCCCTTCACCTCCATTCCCCTCCTCGCCTACTGCACCATCCCCGCCGTCTGCCTCCTC ACCGGCAAGTTCATCATCCCCACGCTTAACAATTTGGCGAGCATATGGTTCATAGCGCTT TTCCTGTCGATCATCGCGACGGGGGTGCTGGAGCTGCGGTGGAGCGGGGTGAGCATCGAG GACTGGTGGAGGAACGAGCAGTTCTGGGTGATCGGCGGCGTGTCGGCGCACCTGTTCGCC GTGTTCCAGGGCCTCCTCAAGGTGCTCGGCGGCGTGGACACCAACTTCACGGTGACGTCC AAGGCCGCCGCCGACGAGACCGACGCGTTCGGCGAGCTCTACCTGTTCAAGTGGACGACG CTGCTGGTGCCGCCGACGACGCTGATCATCATCAACATGGTGGGGATCGTCGCCGGCGTG TCGGACGCCGTGAACAACGGGTACGGGTCGTGGGGCCCGCTGTTCGGGAAGCTCTTCTTC TCCTTCTGGGTCATCCTCCACCTCTACCCCTTCCTCAAGGGGCTCATGGGGAGGCAGAAC CGGACGCCCACCATTGTCGTGCTCTGGTCCATCCTCCTCGCCTCCATCTTCTCCCTCGTC TGGGTCAGGATCGACCCCTTCATCCCCAAGCCCAAGGGCCCCGTCCTCAAGCCATGCGGG GTCTCGTGCTGA

Peptide Sequence

PEP ID	Os10t0467800-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:17262050:17266561:1 gene:Os10g0467800 transcript:Os10t0467800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE A7 description:Secondary wall-specific cellulose synthase, Secondary cell wall formation (Os10t0467800-01)
Sequence	MDTASVTGGEHKGKEKTCRVCGEEVAAREDGKPFVACAECGFPVCKPCYEYERSEGTQCC PQCNTRYKRHKGCPRVEGDEDDGGDMDDFEEEFQIKSPTKQKPPHEPVNFDVYSENGEQP AQKWRPGGPALSSFTGSVAGKDLEQEREMEGGMEWKDRIDKWKTKQEKRGKLNRDDSDDD DDKNDDEYMLLAEARQPLWRKVPIPSSKINPYRIVIVLRLVVLCFFLKFRITTPAMDAVP LWLASVICELWFALSWILDQLPKWSPVTRETYLDRLALRYERDGEPCRLAPIDFFVSTVD PLKEPPIITANTVLSILAVDYPVDRVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKF TIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWV MQDGTPWPGNNTRDHPGMIQVYLGSQGALDVEGSELPRLVYVSREKRPGYNHHKKAGAMN SLVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDKQLGKKLCYVQFPQRFDGIDR HDRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPRPEKRPKMTCDCWPS WCCCCCCFGGGKRGKSHKNKKGGGGGEGGGLDEPRRGLLGFYKKRSKKDKLGGGAASLAG GKKGYRKHQRGFELEEIEEGLEGYDELERSSLMSQKSFEKRFGQSPVFIASTLVEDGGLP QGAAADPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCT PARAAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGRLKWLERFAYTNTIV YPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFIALFLSIIATGVLELRWSGVSIE DWWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAAADETDAFGELYLFKWTT LLVPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWVILHLYPFLKGLMGRQN RTPTIVVLWSILLASIFSLVWVRIDPFIPKPKGPVLKPCGVSC

Transcript Sequence

Transcript ID	Os10t0467800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:17262050:17266561:1 gene:Os10g0467800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE A7 description:Secondary wall-specific cellulose synthase, Secondary cell wall formation (Os10t0467800-01)
Sequence	GCCCACCAACGTCGCTTCCCCGGCACCTCACCATGGACACCGCCTCCGTCACCGGTGGCG AGCACAAGGGGAAGGAGAAGACGTGCCGGGTGTGCGGCGAGGAGGTGGCGGCGAGGGAGG ACGGGAAGCCGTTCGTGGCGTGCGCCGAGTGCGGCTTCCCGGTGTGCAAGCCCTGCTACG AGTACGAGCGCAGCGAGGGCACCCAGTGCTGCCCCCAGTGCAACACCCGCTACAAGCGCC ACAAAGGGTGCCCACGGGTGGAAGGCGACGAGGACGACGGCGGCGACATGGACGACTTCG AGGAGGAGTTCCAGATCAAGAGCCCCACCAAGCAGAAACCCCCCCACGAGCCCGTCAACT TCGACGTCTACTCGGAGAACGGCGAGCAGCCGGCACAGAAGTGGCGCCCTGGAGGCCCGG CGCTCTCTTCCTTCACCGGAAGCGTGGCTGGGAAGGATCTGGAGCAGGAGAGGGAGATGG AGGGTGGCATGGAGTGGAAGGACAGGATCGACAAGTGGAAGACGAAGCAGGAGAAGCGGG GCAAGCTCAACCGCGACGACAGCGACGACGACGACGACAAGAACGACGACGAGTACATGC TGCTCGCGGAGGCGAGGCAGCCGCTGTGGAGGAAGGTGCCGATCCCGTCGAGCAAGATCA ACCCGTACCGGATCGTGATCGTGCTCCGGCTGGTGGTGCTCTGCTTCTTCCTCAAGTTCC GGATCACGACGCCGGCGATGGACGCGGTGCCGCTGTGGCTGGCCTCGGTGATCTGCGAGC TGTGGTTCGCGCTGTCGTGGATCCTCGACCAGCTGCCCAAGTGGTCGCCGGTGACGAGGG AGACGTACCTGGACCGGCTGGCCCTCCGGTACGAGCGCGACGGCGAGCCGTGCCGCCTGG CCCCGATCGATTTCTTCGTCAGCACGGTGGACCCGCTCAAGGAGCCGCCCATCATCACCG CCAACACCGTGCTGTCCATCCTCGCCGTCGACTACCCCGTCGACCGCGTCTCCTGCTACG TCTCCGACGACGGCGCGTCCATGCTGCTCTTCGACACGCTCTCCGAGACCGCCGAGTTCG CCCGCCGGTGGGTCCCCTTCTGCAAGAAGTTCACCATCGAGCCCCGCGCCCCCGAGTTCT ACTTCTCCCAGAAGATCGACTACCTCAAGGACAAGGTCCAGCCCACCTTCGTCAAAGAAC GCCGCGCCATGAAGAGAGAGTATGAGGAGTTCAAGGTGAGGATAAACGCGCTGGTGGCGA AGGCGCAGAAGAAGCCGGAGGAAGGGTGGGTGATGCAGGACGGGACGCCATGGCCGGGGA ACAACACGAGGGACCACCCGGGGATGATCCAGGTGTACCTGGGCAGCCAGGGCGCGCTCG ACGTCGAGGGCAGCGAGCTGCCGCGGCTGGTGTACGTGTCCCGCGAGAAGCGGCCCGGCT ACAACCACCACAAGAAGGCCGGCGCCATGAACTCCCTCGTTCGCGTCTCCGCCGTGCTTA CCAACGCCCCCTTCATCCTCAACCTCGACTGCGACCACTACGTCAACAACAGCAAGGCCG TCCGCGAGGCCATGTGCTTCCTCATGGACAAGCAGCTCGGCAAGAAGCTGTGCTACGTCC AGTTCCCCCAGCGCTTCGACGGCATCGACCGCCACGATCGCTACGCCAACCGCAACACCG TCTTCTTCGACATCAACATGAAGGGGCTGGACGGGATACAGGGGCCGGTGTACGTGGGGA CGGGGACGGTGTTCAACAGGCAGGCGCTGTACGGATACGACCCGCCGCGGCCGGAGAAGA GGCCGAAGATGACGTGCGACTGCTGGCCGTCGTGGTGCTGCTGCTGCTGCTGCTTCGGCG GGGGGAAGCGCGGCAAGTCGCACAAGAACAAGAAGGGCGGCGGCGGCGGCGAGGGCGGCG GCCTCGACGAGCCGCGCCGCGGGCTGCTCGGGTTCTACAAGAAGAGGAGCAAGAAGGACA AGCTCGGCGGCGGCGCGGCGTCGCTCGCCGGAGGGAAGAAAGGGTACCGGAAGCACCAGC GCGGGTTCGAGCTGGAGGAGATCGAGGAGGGCCTCGAGGGGTACGACGAGCTGGAGCGCT CGTCGCTCATGTCGCAGAAGAGCTTCGAGAAGCGGTTCGGCCAGTCGCCGGTGTTCATCG CCTCCACCCTCGTCGAGGACGGCGGCCTCCCCCAGGGCGCCGCCGCCGACCCCGCCGCCC TCATCAAGGAGGCCATCCACGTCATCAGCTGCGGCTACGAGGAGAAGACCGAGTGGGGCA AGGAGATTGGGTGGATCTACGGGTCGGTGACGGAGGACATCTTAACGGGGTTCAAGATGC ATTGCCGTGGGTGGAAGTCGGTGTACTGCACGCCGGCGAGGGCGGCATTCAAGGGGTCGG CGCCCATCAACCTGTCGGATCGTCTGCACCAGGTGCTCCGGTGGGCGCTCGGCTCCGTCG AGATCTTCATGAGCCGCCATTGCCCGCTCTGGTACGCCTATGGCGGCCGCCTCAAGTGGC TCGAGCGCTTCGCCTACACCAACACCATCGTCTACCCCTTCACCTCCATTCCCCTCCTCG CCTACTGCACCATCCCCGCCGTCTGCCTCCTCACCGGCAAGTTCATCATCCCCACGCTTA ACAATTTGGCGAGCATATGGTTCATAGCGCTTTTCCTGTCGATCATCGCGACGGGGGTGC TGGAGCTGCGGTGGAGCGGGGTGAGCATCGAGGACTGGTGGAGGAACGAGCAGTTCTGGG TGATCGGCGGCGTGTCGGCGCACCTGTTCGCCGTGTTCCAGGGCCTCCTCAAGGTGCTCG GCGGCGTGGACACCAACTTCACGGTGACGTCCAAGGCCGCCGCCGACGAGACCGACGCGT TCGGCGAGCTCTACCTGTTCAAGTGGACGACGCTGCTGGTGCCGCCGACGACGCTGATCA TCATCAACATGGTGGGGATCGTCGCCGGCGTGTCGGACGCCGTGAACAACGGGTACGGGT CGTGGGGCCCGCTGTTCGGGAAGCTCTTCTTCTCCTTCTGGGTCATCCTCCACCTCTACC CCTTCCTCAAGGGGCTCATGGGGAGGCAGAACCGGACGCCCACCATTGTCGTGCTCTGGT CCATCCTCCTCGCCTCCATCTTCTCCCTCGTCTGGGTCAGGATCGACCCCTTCATCCCCA AGCCCAAGGGCCCCGTCCTCAAGCCATGCGGGGTCTCGTGCTGAGCTGCTGCTGCTACTT CTCTGTGTCTCTGCATTTTGCAAGAGGGATGACCGGATGGATGATTCTTGTTGTATGGAG TATTTTGACTTGTTCATGTACAAGTTTTTGTGAGTGGGATAAAAGTGTTTTGGGGGTAAA ATTTGTAAGAACTGAGGTGGAGATTATACTCGAATTTAAGAACAATTGTTTTTGAATTTT CTTTT