Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0467200-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:17250766:17255582:1 gene:Os10g0467200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxisome assembly, p12 domain containing protein. (Os10t0467200-01)
Sequence	ATGCTGTTCCAGGTGGGAGGGCAGGGGGCGCGGCCCACCTTCTTCGAGATGTCGGCCGCG CAGCAGCTGCCGGCCAGCCTCCGCGCCGCGCTCTCCTACTCGCTCGGGGTTTTTGCACTA AGACGGCCGTTGTTACATAAAGTTTTAGATTACGAGGATGAATTCTTTGCCTTGTTAATG GCTGTCCTTGAGTCCCATAGTTTGCGAACGACAGATGGTTCTTTTTCGGAGTCATTGTAT GGTCTCAGGCGGAGACCTGTTAAGGTTTCAGTAAAGAGAAGTAGTTCTGGTGCAGAATCC AATGATAAAGCCTATGATTCTGTTCTAAGGAAGCGCCAGAAAGTCCTTTCTGTTGTTTTT TTGGTTGTTTTGCCATATTTCAAGTCAAAGCTGCAGTCCATATATAACAAAGAAAGGGAG GCCAGGTTGCAGGCAAGCCTTTGGGGTCAGGGTGATGTTAGATTCGATGAAGCTGACCTT GTTTCAGATCAAGGGGAGACTTCTCAAGCACAAGTCGAGGCTACAACTGGAGAAGTATCA AATATGGCACGTATTAAGAAGAATTTTGCGGCATTAATAGGTGTTTGCTATCCATGGATT CATGCGACCAATGAAGGTCTCTCATTTGCTTACCAGTTGCTGTATTTGTTGGATGGTACT GCATTTTATAGTCCAGCACTGCATGCTCTTGGGCTTCATGTTTGTCGTGCTACAGGACAA GAGCTGATGGAATCATCTTCTAGGGTATCAAGAATCAGAAATCGAGAACTTGAGAGACTT CGTGGTCCTCCATGGCTGAAGACCATGCAAAGGGTGTTACTTAACTGTATGTACACTAGC CTAGATTATGCACAAACTGGTTTGATTGCTGCAGTTTTCTTTTTCAAGATGATGGAATGG TGGTATCAATCTGCTGAGGAAAGAATGTCAGCTCCGACTGTATATCCCCCACCCCCTCCT CCACCTCTGCCAAAGGTTGCTAAAGATGGACTTCCCTTGCCCCCTGACAGGACATTGTGC CCCTTATGCTGCCAGAAGCGCAATAACCCTTCTGTTCTTTCTGCTTCTGGTTTTGTATTC TGCTACAGTTGCATTTTTAAGTCAGTCTCCCAGCATAAAAGGTGCCCCATCACATTGATG CCTGCCACAGTAGAACAAATCAGACGCCTCTTTCATGATTTGTAG

Peptide Sequence

PEP ID	Os10t0467200-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:17250766:17255582:1 gene:Os10g0467200 transcript:Os10t0467200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxisome assembly, p12 domain containing protein. (Os10t0467200-01)
Sequence	MLFQVGGQGARPTFFEMSAAQQLPASLRAALSYSLGVFALRRPLLHKVLDYEDEFFALLM AVLESHSLRTTDGSFSESLYGLRRRPVKVSVKRSSSGAESNDKAYDSVLRKRQKVLSVVF LVVLPYFKSKLQSIYNKEREARLQASLWGQGDVRFDEADLVSDQGETSQAQVEATTGEVS NMARIKKNFAALIGVCYPWIHATNEGLSFAYQLLYLLDGTAFYSPALHALGLHVCRATGQ ELMESSSRVSRIRNRELERLRGPPWLKTMQRVLLNCMYTSLDYAQTGLIAAVFFFKMMEW WYQSAEERMSAPTVYPPPPPPPLPKVAKDGLPLPPDRTLCPLCCQKRNNPSVLSASGFVF CYSCIFKSVSQHKRCPITLMPATVEQIRRLFHDL

Transcript Sequence

Transcript ID	Os10t0467200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:17250766:17255582:1 gene:Os10g0467200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxisome assembly, p12 domain containing protein. (Os10t0467200-01)
Sequence	ACACGCACACACACCGCCGTGGACGCCGAGGACTACACTAACCGGCGGCTGCGGCGGCAA CTCCGGCGGATCCACCCGCAGCTAGGCCGAGTCGCGCTGCCGGGGAAGAGGCAGCGGGAA CCCTAGCCGGCCGAGCCTAGCCCGGGGGAGGAGGAGGAGGCAGGATGCTGTTCCAGGTGG GAGGGCAGGGGGCGCGGCCCACCTTCTTCGAGATGTCGGCCGCGCAGCAGCTGCCGGCCA GCCTCCGCGCCGCGCTCTCCTACTCGCTCGGGGTTTTTGCACTAAGACGGCCGTTGTTAC ATAAAGTTTTAGATTACGAGGATGAATTCTTTGCCTTGTTAATGGCTGTCCTTGAGTCCC ATAGTTTGCGAACGACAGATGGTTCTTTTTCGGAGTCATTGTATGGTCTCAGGCGGAGAC CTGTTAAGGTTTCAGTAAAGAGAAGTAGTTCTGGTGCAGAATCCAATGATAAAGCCTATG ATTCTGTTCTAAGGAAGCGCCAGAAAGTCCTTTCTGTTGTTTTTTTGGTTGTTTTGCCAT ATTTCAAGTCAAAGCTGCAGTCCATATATAACAAAGAAAGGGAGGCCAGGTTGCAGGCAA GCCTTTGGGGTCAGGGTGATGTTAGATTCGATGAAGCTGACCTTGTTTCAGATCAAGGGG AGACTTCTCAAGCACAAGTCGAGGCTACAACTGGAGAAGTATCAAATATGGCACGTATTA AGAAGAATTTTGCGGCATTAATAGGTGTTTGCTATCCATGGATTCATGCGACCAATGAAG GTCTCTCATTTGCTTACCAGTTGCTGTATTTGTTGGATGGTACTGCATTTTATAGTCCAG CACTGCATGCTCTTGGGCTTCATGTTTGTCGTGCTACAGGACAAGAGCTGATGGAATCAT CTTCTAGGGTATCAAGAATCAGAAATCGAGAACTTGAGAGACTTCGTGGTCCTCCATGGC TGAAGACCATGCAAAGGGTGTTACTTAACTGTATGTACACTAGCCTAGATTATGCACAAA CTGGTTTGATTGCTGCAGTTTTCTTTTTCAAGATGATGGAATGGTGGTATCAATCTGCTG AGGAAAGAATGTCAGCTCCGACTGTATATCCCCCACCCCCTCCTCCACCTCTGCCAAAGG TTGCTAAAGATGGACTTCCCTTGCCCCCTGACAGGACATTGTGCCCCTTATGCTGCCAGA AGCGCAATAACCCTTCTGTTCTTTCTGCTTCTGGTTTTGTATTCTGCTACAGTTGCATTT TTAAGTCAGTCTCCCAGCATAAAAGGTGCCCCATCACATTGATGCCTGCCACAGTAGAAC AAATCAGACGCCTCTTTCATGATTTGTAGTTTGATTAGACAGAACACACTCTTCTCCCCA AAGATCAGGGGAAGCCGGATATAAAGAATCGTACTATGCAGCTATTCATTTTTGTTGAAC AGACCACAAGGAACTCAGCCCTTCTGACACTCAAGGCATGGCCATCTACTCAAGAACAGT GCTGTTGATTCTTCCCCCGTTAGGAAATTCTATGTTCATACAAAGCTTGTATTCGTTTTC TTCTGTTGAAATCAAAAAAACATGCACAGCTCGAGATTTTGGTACTGATGTGCAATTACT GT