Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0466300-02
CDS Infomation	cds chromosome:IRGSP-1.0:10:17203627:17210541:-1 gene:Os10g0466300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 72, U-box protein 72 description:Similar to Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica. (Os10t0466300-01);Similar to Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica. (Os10t0466300-02)
Sequence	ATGATCTGCGCAATCTCCGGCGAGGTGCCGGATGAGCCGGTGGTGTCGAAGAAGTCCGGG CTTCTCTTCGAGCGGCGGCTCGTCGAGCGCTACATCGAGGACCATGGGAAGTGCCCAGTC ACCAAGGAGGAGCTCACCATGGACGACATCGTGGCGGTGAAGACCAACAAGGTTGTGAAG CCCAGACAATTGCAGGCTGCAAGCATTCCCGGACTCCTGGGGATGTTCCAAAATGAGTGG GATGCTATCATGCTTTCTAGTTTTGCTTTGGAGCAGCAGCTTCATACAGCAAGACAAGAA CTTAGTCATGCGCTATATCAGCATGATGCTGCCTGCCGTGTTATAGCTAGATTAAAGAAA GAACGAGATGAAGCCAGAGCACTTTTGGCTCAAGCTGAGAGACAGATTCCTGCATCGATG GCAGGAGCTGCACCTACAGCTGTTGTCTCCAACGGGAAAAGAGCATTTGAAGATGAAGTT GGACCAGACGGGAAGAAGATTCGTCCTGGTATCAACCCTGTGATGATTGATGAACTAACA GAGTGTAATACCATGCTCTCTGCGCATCGTAAGAAACGACAGGTTCCTCCAACTTTGGCA TCAATTGATGCAATTGAGAGATATACCCAGATCTCCAGTCATCCACTTCACAAGACAAAC AAACCAGGCATCTTATCTATGGATATTCATCCTTCAAAGGACATTATTGCAACTGGTGGC ATTGATACAAACGCAGTGCTTTTTGACAGGCCATCCGGTCAAATCTTGTGCACACTTACT GGTCACTCAAAGAAGATAACCAGTTTGAAATTTGTTCCTCGGGATGAGCTCTTTGTAACT GGATCAGCAGATAAGACTGTTAAAATTTGGCAAGGAAGCGAGGAGGGAAATTACAATTGC ATCCATACATTGAAAGATCACACTGCCGAGGTTGAAGCTGTTACAGTCCATGCGACTCAG AAGTACTTTGTGACTGCTTCCAAGGATAATACTTGGTGCTTCTACGATATTCCATCAGGA TCTTGCCTCACACAGGTTGGCGAGTCTTCAGGACAAGAGGGATATACATCTGCATCTTTC CACCCAGATGGTCTTATCCTGGGGACAGGGACCACTGAAGCTGTTGTCAAAATTTGGGAT GTGAAGACGCAGTCAAATGTTGCAAAGTTTGAGGGGCATGTTGGACCAGTGACTGCTATG TCCTTCTCTGAAAATGGTTACTTCCTTGCGACTGCTGCTCTCGATGGAGTCAAGCTTTGG GATCTTCGAAAATTAAGAAACTTTAGGACGATATCACCTTATGACTCAGACACGCCAACA AATTCTGTGGAATTTGACTTTAGCGGAAGTTATCTAGCTGTTGGTGGTTCAGATACAAGG GTTTACCAAGTAGCAAATGTTAAGCTTGAATGGAATCTTGTCAAGACCTTACCAGATTTG TCAGGCACAGGGAAAGTGACAAACGTCAAGTTTGGCACCGATGCGAAGTACATTGCCGTA GGTTCTATGGATCGTAACCTACGGATATTTGGGCATCCGGGAGAAGATGATCAAATGGAC GACGCAAAGCCATCGGAAGAGTGA

Peptide Sequence

PEP ID	Os10t0466300-02
PEP Infomation	pep chromosome:IRGSP-1.0:10:17203627:17210541:-1 gene:Os10g0466300 transcript:Os10t0466300-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 72, U-box protein 72 description:Similar to Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica. (Os10t0466300-01);Similar to Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica. (Os10t0466300-02)
Sequence	MICAISGEVPDEPVVSKKSGLLFERRLVERYIEDHGKCPVTKEELTMDDIVAVKTNKVVK PRQLQAASIPGLLGMFQNEWDAIMLSSFALEQQLHTARQELSHALYQHDAACRVIARLKK ERDEARALLAQAERQIPASMAGAAPTAVVSNGKRAFEDEVGPDGKKIRPGINPVMIDELT ECNTMLSAHRKKRQVPPTLASIDAIERYTQISSHPLHKTNKPGILSMDIHPSKDIIATGG IDTNAVLFDRPSGQILCTLTGHSKKITSLKFVPRDELFVTGSADKTVKIWQGSEEGNYNC IHTLKDHTAEVEAVTVHATQKYFVTASKDNTWCFYDIPSGSCLTQVGESSGQEGYTSASF HPDGLILGTGTTEAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAALDGVKLW DLRKLRNFRTISPYDSDTPTNSVEFDFSGSYLAVGGSDTRVYQVANVKLEWNLVKTLPDL SGTGKVTNVKFGTDAKYIAVGSMDRNLRIFGHPGEDDQMDDAKPSEE

Transcript Sequence

Transcript ID	Os10t0466300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:17203627:17210541:-1 gene:Os10g0466300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 72, U-box protein 72 description:Similar to Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica. (Os10t0466300-01);Similar to Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica. (Os10t0466300-02)
Sequence	CCCCCGCCGCCGCCGGCGCCGCCGCCACCACCACTGCCGGAGAGAGAGAGAGCTGCCTGG GAGGAGCAGCCTCGGTGCGCGCGCGCGCGCTAATCCCCTCCTCCACTCTCCGTCGCCGCC GCCGCCGCAGCCATGATCTGCGCAATCTCCGGCGAGGTGCCGGATGAGCCGGTGGTGTCG AAGAAGTCCGGGCTTCTCTTCGAGCGGCGGCTCGTCGAGCGCTACATCGAGGACCATGGG AAGTGCCCAGTCACCAAGGAGGAGCTCACCATGGACGACATCGTGGCGGTGAAGACCAAC AAGGTTGTGAAGCCCAGACAATTGCAGGCTGCAAGCATTCCCGGACTCCTGGGGATGTTC CAAAATGAGTGGGATGCTATCATGCTTTCTAGTTTTGCTTTGGAGCAGCAGCTTCATACA GCAAGACAAGAACTTAGTCATGCGCTATATCAGCATGATGCTGCCTGCCGTGTTATAGCT AGATTAAAGAAAGAACGAGATGAAGCCAGAGCACTTTTGGCTCAAGCTGAGAGACAGATT CCTGCATCGATGGCAGGAGCTGCACCTACAGCTGTTGTCTCCAACGGGAAAAGAGCATTT GAAGATGAAGTTGGACCAGACGGGAAGAAGATTCGTCCTGGTATCAACCCTGTGATGATT GATGAACTAACAGAGTGTAATACCATGCTCTCTGCGCATCGTAAGAAACGACAGGTTCCT CCAACTTTGGCATCAATTGATGCAATTGAGAGATATACCCAGATCTCCAGTCATCCACTT CACAAGACAAACAAACCAGGCATCTTATCTATGGATATTCATCCTTCAAAGGACATTATT GCAACTGGTGGCATTGATACAAACGCAGTGCTTTTTGACAGGCCATCCGGTCAAATCTTG TGCACACTTACTGGTCACTCAAAGAAGATAACCAGTTTGAAATTTGTTCCTCGGGATGAG CTCTTTGTAACTGGATCAGCAGATAAGACTGTTAAAATTTGGCAAGGAAGCGAGGAGGGA AATTACAATTGCATCCATACATTGAAAGATCACACTGCCGAGGTTGAAGCTGTTACAGTC CATGCGACTCAGAAGTACTTTGTGACTGCTTCCAAGGATAATACTTGGTGCTTCTACGAT ATTCCATCAGGATCTTGCCTCACACAGGTTGGCGAGTCTTCAGGACAAGAGGGATATACA TCTGCATCTTTCCACCCAGATGGTCTTATCCTGGGGACAGGGACCACTGAAGCTGTTGTC AAAATTTGGGATGTGAAGACGCAGTCAAATGTTGCAAAGTTTGAGGGGCATGTTGGACCA GTGACTGCTATGTCCTTCTCTGAAAATGGTTACTTCCTTGCGACTGCTGCTCTCGATGGA GTCAAGCTTTGGGATCTTCGAAAATTAAGAAACTTTAGGACGATATCACCTTATGACTCA GACACGCCAACAAATTCTGTGGAATTTGACTTTAGCGGAAGTTATCTAGCTGTTGGTGGT TCAGATACAAGGGTTTACCAAGTAGCAAATGTTAAGCTTGAATGGAATCTTGTCAAGACC TTACCAGATTTGTCAGGCACAGGGAAAGTGACAAACGTCAAGTTTGGCACCGATGCGAAG TACATTGCCGTAGGTTCTATGGATCGTAACCTACGGATATTTGGGCATCCGGGAGAAGAT GATCAAATGGACGACGCAAAGCCATCGGAAGAGTGATGAAACCAATTGTACTTCATTTGG CCTGCGTAAATTGCTCCCTGTTTGTGTGTTTTGACGGTGGATGAGCTGGCTGAGATTGGA GGCACATAACAACGGGAGACGAGAAGTTCCTTGCAGGAGCAATTTGGTGGGCTTTGGTCG ATGTAAACAAATTTGACATTGTTATTGTATTTGTAGGCCTTACTACCTAATGAGGATACG GTTTGTTTTGGAGATGAATACAATGCTGAAGTGCTCGACTTGCGG