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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0466200-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:17201518:17203079:-1 gene:Os10g0466200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L11 family protein. (Os10t0466200-01)
Sequence

ATGGCAACCACTCTGAAAGATGCAGTTGCACGGAAGCCTGTGTTGGCAACAATCCGCCTT
ATCGTTCCAGCTGGTGCCGCCCGCCCTGCGCCACCAGTTGGTCCAGCGCTAGGTTTCTAC
AGGCTGAACCTGATGGCGTTCTGCAAGGATTTCAATGCCAGGACTCAGAAGTATAAGGCA
GAAACTCCTATGCAGGTTACCTTAACTGCCTACAAGGACAGCACATTCGAGTTTGTAGTC
AAGTCACCATCTGTCTCATGGTTCCTCAAGAAGGCCGCCGGGATTGAGACAGCCAGCGGC
CGTCCAGGGCACACTGTAGTGTCATCCCTTTCACTTCGCCATGTCTACGAGATCGCGAAA
TTGAAGCAATCTGATCCCTACTGCAAGCACATGTCACTCGAGGCGCTGTGCAAGTCAATC
ATTGGCACAGCCAACTCCATGGGCATTGAGATTGTTAAAGATCTATGA

Peptide Sequence

PEP ID

Os10t0466200-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:17201518:17203079:-1 gene:Os10g0466200 transcript:Os10t0466200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L11 family protein. (Os10t0466200-01)
Sequence

MATTLKDAVARKPVLATIRLIVPAGAARPAPPVGPALGFYRLNLMAFCKDFNARTQKYKA
ETPMQVTLTAYKDSTFEFVVKSPSVSWFLKKAAGIETASGRPGHTVVSSLSLRHVYEIAK
LKQSDPYCKHMSLEALCKSIIGTANSMGIEIVKDL

Transcript Sequence

Transcript ID

Os10t0466200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:17201518:17203079:-1 gene:Os10g0466200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L11 family protein. (Os10t0466200-01)
Sequence

ACACAACAAGTCGATTCGATCCATCCCGGAGGATCCTCCGCCGCCGCCGTCCCGGAGCGC
CGCCGCCGCCGCCGTCGTACCGGAGATCTTCATAAGCCTACGGCATGGCAACCACTCTGA
AAGATGCAGTTGCACGGAAGCCTGTGTTGGCAACAATCCGCCTTATCGTTCCAGCTGGTG
CCGCCCGCCCTGCGCCACCAGTTGGTCCAGCGCTAGGTTTCTACAGGCTGAACCTGATGG
CGTTCTGCAAGGATTTCAATGCCAGGACTCAGAAGTATAAGGCAGAAACTCCTATGCAGG
TTACCTTAACTGCCTACAAGGACAGCACATTCGAGTTTGTAGTCAAGTCACCATCTGTCT
CATGGTTCCTCAAGAAGGCCGCCGGGATTGAGACAGCCAGCGGCCGTCCAGGGCACACTG
TAGTGTCATCCCTTTCACTTCGCCATGTCTACGAGATCGCGAAATTGAAGCAATCTGATC
CCTACTGCAAGCACATGTCACTCGAGGCGCTGTGCAAGTCAATCATTGGCACAGCCAACT
CCATGGGCATTGAGATTGTTAAAGATCTATGAGCTGCTTGGCCCCATCTTTGTCATGAGG
GGAGTTGGTGAGTTGCTTAATGATTTTGTGTATTACTAATTTTTAGTTGGGGAAGTAAAT
TGTGTCCTGGTTTATTGAGCAGAGATCTTGAGAGTTCCATGCCTCTGAAATTGCCTTCAG
CACAGCCTTTTTTCTCTCTGCAATTCTGATCTGAAACATGTAGTTCCCACAAATCGTTCT
CACCGATGTCAATTTGTTCAATGTGGTGATGGTACAATGAAAATAATAGATTTCTCTGAT
GATGGACTC