Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0466100-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:17198438:17200621:1 gene:Os10g0466100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os10t0466100-00)
Sequence

ATGGTGCACAGGTTCTTCTCCTGCACGGGCGCCACCCGGCCGCCGGCGCCCGAGAACGCT
GACATCACCCTCGTCTCGGGCCCTTCGTGCTGCGGGAAGACGTCGCTTCTCTTCCAGTTC
GCGATAAACCGCGCGACGGAGAGTGGACGAGGCGTGGTGTTCATCTGCAGGAAGGGGAGA
CTGGAGAATAGCCCCCCGTTCTTGTCCCAGGGTATTGATCTATCACACAGCGTGCTTCAG
AGAATCCATATCAAATACATTGAAGATGATGAGGGCATCAGAAAGTACTTCGCGGCATTT
CATCTGCTTGGCAGCTTCCCTGCTGCAGTAATTATTGATGATTTTGCAGATTTCTTCTCA
GAAAGGAGCTGTCAGCAAAGATATGGAAATGCTAGGGCTCGGGATCTAGCAGTGGTTCGC
ATATTAGCTCTGTGTCAAAATGCTGTTGCGCATGCAAACACAAAGCTCGGAGTCCCTGGG
TCTTGTAATCTCTTGCTCTCTGATGTTCATCAAGGTGACACCCCAAGATCCATGTTCATT
TACAAGAGGTGGATAAGTTCAATATATACAATCCAAGGTGATGGGCATGGATCCTACATA
CTCAAGAGCATTAGCAGTTCAGATTGTGGGTCCAGGGAAGGAAGAGCAGCCAAGTACTCA
ATAGCACTGCAATATCTTGTGCTTGAACATATCAGCAATGGATAG

Peptide Sequence

PEP ID

Os10t0466100-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:17198438:17200621:1 gene:Os10g0466100 transcript:Os10t0466100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os10t0466100-00)
Sequence

MVHRFFSCTGATRPPAPENADITLVSGPSCCGKTSLLFQFAINRATESGRGVVFICRKGR
LENSPPFLSQGIDLSHSVLQRIHIKYIEDDEGIRKYFAAFHLLGSFPAAVIIDDFADFFS
ERSCQQRYGNARARDLAVVRILALCQNAVAHANTKLGVPGSCNLLLSDVHQGDTPRSMFI
YKRWISSIYTIQGDGHGSYILKSISSSDCGSREGRAAKYSIALQYLVLEHISNG

Transcript Sequence

Transcript ID

Os10t0466100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:17198438:17200621:1 gene:Os10g0466100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os10t0466100-00)
Sequence

ATGGTGCACAGGTTCTTCTCCTGCACGGGCGCCACCCGGCCGCCGGCGCCCGAGAACGCT
GACATCACCCTCGTCTCGGGCCCTTCGTGCTGCGGGAAGACGTCGCTTCTCTTCCAGTTC
GCGATAAACCGCGCGACGGAGAGTGGACGAGGCGTGGTGTTCATCTGCAGGAAGGGGAGA
CTGGAGAATAGCCCCCCGTTCTTGTCCCAGGGTATTGATCTATCACACAGCGTGCTTCAG
AGAATCCATATCAAATACATTGAAGATGATGAGGGCATCAGAAAGTACTTCGCGGCATTT
CATCTGCTTGGCAGCTTCCCTGCTGCAGTAATTATTGATGATTTTGCAGATTTCTTCTCA
GAAAGGAGCTGTCAGCAAAGATATGGAAATGCTAGGGCTCGGGATCTAGCAGTGGTTCGC
ATATTAGCTCTGTGTCAAAATGCTGTTGCGCATGCAAACACAAAGCTCGGAGTCCCTGGG
TCTTGTAATCTCTTGCTCTCTGATGTTCATCAAGGTGACACCCCAAGATCCATGTTCATT
TACAAGAGGTGGATAAGTTCAATATATACAATCCAAGGTGATGGGCATGGATCCTACATA
CTCAAGAGCATTAGCAGTTCAGATTGTGGGTCCAGGGAAGGAAGAGCAGCCAAGTACTCA
ATAGCACTGCAATATCTTGTGCTTGAACATATCAGCAATGGATAGATCATATTTTCTACT
GTTTGGTCCCAGTACCCAAACATGTACAATCATA