Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0464500-00
CDS Infomation	cds chromosome:IRGSP-1.0:10:17140936:17145821:-1 gene:Os10g0464500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os10t0464500-00)
Sequence	ATGGCGGTGGCGAAGTGGGAGCGCGCCAAGCGCGCGCTTGCCACCAGGCTCTGCGTCCGC GCGCCGAGGGTGCGGGCGGCGGCGGCGGAGGCGGAGGGGGAGGGGGAGGAGGGGGAAGGG AGGGGGAGGTCGGTGGCCGCCTCGCCGCCCGCGCATGTGGCCTCCTCGCGGCGGCTGTCG AGGTGCGGGAGCAGGAGCTCCACGAAGATATGTGCCATTTGCCTCGGAGGAATGTGTTCA GGCAATGGCCAAGCCTTGTTCACCGCGGAATGCTCCCACAAGTTCCACTTCCACTGCATC TCCTCCAGCGTTCGCCACGGCAACACCGTCTGCCCGATTTGCCGCGCCGTGTGGAAGGAG CTGCCGTTCCAGGGCCCTCTCCCTGCAGCAGCAGCAGCAGATGCTAGTCTTCTTGGAACA GCTCGAGTGAACCCTCACCCACTGGATGACAGGCATCAGCATCAGCGAATGGCCGTTGTC CGCAGGCTGTCTCGCGGAGACAGCGTGACCCGGCAATGGCAGCTCCCGATCTTTCGTACG CTGGATGGCGGCATTTTCGATGACGATGAACAGTTGGATCTTCATCCTGCTGAAGATGTG GTTGGAACTCAGGATGTTGATTCGATCGTCGCTGATGAAATGGCGCCTGCTTCTGTTGGG ATCACGACGTACGCTGCGTTCCCGGCGATGGAGGAGTCTGTGATGGTTGAGGAGTTTGCG GTGTTGATCCACCTGAAGGCTCCGTCTTCTCCGGCGACGGTGACCTCCCGCGCGCCCATC GACCTCGTCACCGTGCTCGACGTGAGCTGGAGCATGGCCGGGACGAAGCTGGCGCTGCTG AAGCGCGCCATGAGCTTCGTGATCCAGGCGCTCGGCCCCGGCGACCGGCTGTCCGTCGTC ACGTTCTCGTCGTCGGCGAGGAGGCTGTTCCCGCTGAGGAAGATGACGGAGTCCGGGCGG CAGCGCGCGTTGCAGAGGGTGAGCTCGCTCGTCGCCGACGGCGGCACCAACATCGCCGAC GCGCTGAGGAAGGCGGCGAGGGTGATGGAGGACAGGAGGGAGAGGAACCCCGTGTGCAGC ATCGTCCTCCTCTCCGACGGCCGGGACACCTACACCGTCCCGGTGCCGCGCGGCGGCGGC GGCGGCGGCGACCAGCCGGACTACGCCGTGCTCGTCCCGAGCTCGCTCCTTCCCGGTGGC GGGTCGGCGCGCCACGTGCAGCGCGCCACGGCGCGCGGCGACTCGACGGAGCTCACCAGC GTCATCCATACCTACCAGACGCCCTTCATGGTCGACATGCTGCAGCGCTCGCAGACGCTC CAGCCGGAGGTCGTCGTGGCGATGAGCCGCTCGGCGCCGCTACCGGCGCCGTCCCTGTCG CTGTCGCCGCCGCCGCCGCCGTCGCAGCTGCGGCGCCGCTCGGTGAGGCCGGCCATGTCG TTCCCCGGGCGGCGTTCGTGA

Peptide Sequence

PEP ID	Os10t0464500-00
PEP Infomation	pep chromosome:IRGSP-1.0:10:17140936:17145821:-1 gene:Os10g0464500 transcript:Os10t0464500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os10t0464500-00)
Sequence	MAVAKWERAKRALATRLCVRAPRVRAAAAEAEGEGEEGEGRGRSVAASPPAHVASSRRLS RCGSRSSTKICAICLGGMCSGNGQALFTAECSHKFHFHCISSSVRHGNTVCPICRAVWKE LPFQGPLPAAAAADASLLGTARVNPHPLDDRHQHQRMAVVRRLSRGDSVTRQWQLPIFRT LDGGIFDDDEQLDLHPAEDVVGTQDVDSIVADEMAPASVGITTYAAFPAMEESVMVEEFA VLIHLKAPSSPATVTSRAPIDLVTVLDVSWSMAGTKLALLKRAMSFVIQALGPGDRLSVV TFSSSARRLFPLRKMTESGRQRALQRVSSLVADGGTNIADALRKAARVMEDRRERNPVCS IVLLSDGRDTYTVPVPRGGGGGGDQPDYAVLVPSSLLPGGGSARHVQRATARGDSTELTS VIHTYQTPFMVDMLQRSQTLQPEVVVAMSRSAPLPAPSLSLSPPPPPSQLRRRSVRPAMS FPGRRS

Transcript Sequence

Transcript ID	Os10t0464500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:17140936:17145821:-1 gene:Os10g0464500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os10t0464500-00)
Sequence	ATGGCGGTGGCGAAGTGGGAGCGCGCCAAGCGCGCGCTTGCCACCAGGCTCTGCGTCCGC GCGCCGAGGGTGCGGGCGGCGGCGGCGGAGGCGGAGGGGGAGGGGGAGGAGGGGGAAGGG AGGGGGAGGTCGGTGGCCGCCTCGCCGCCCGCGCATGTGGCCTCCTCGCGGCGGCTGTCG AGGTGCGGGAGCAGGAGCTCCACGAAGATATGTGCCATTTGCCTCGGAGGAATGTGTTCA GGCAATGGCCAAGCCTTGTTCACCGCGGAATGCTCCCACAAGTTCCACTTCCACTGCATC TCCTCCAGCGTTCGCCACGGCAACACCGTCTGCCCGATTTGCCGCGCCGTGTGGAAGGAG CTGCCGTTCCAGGGCCCTCTCCCTGCAGCAGCAGCAGCAGATGCTAGTCTTCTTGGAACA GCTCGAGTGAACCCTCACCCACTGGATGACAGGCATCAGCATCAGCGAATGGCCGTTGTC CGCAGGCTGTCTCGCGGAGACAGCGTGACCCGGCAATGGCAGCTCCCGATCTTTCGTACG CTGGATGGCGGCATTTTCGATGACGATGAACAGTTGGATCTTCATCCTGCTGAAGATGTG GTTGGAACTCAGGATGTTGATTCGATCGTCGCTGATGAAATGGCGCCTGCTTCTGTTGGG ATCACGACGTACGCTGCGTTCCCGGCGATGGAGGAGTCTGTGATGGTTGAGGAGTTTGCG GTGTTGATCCACCTGAAGGCTCCGTCTTCTCCGGCGACGGTGACCTCCCGCGCGCCCATC GACCTCGTCACCGTGCTCGACGTGAGCTGGAGCATGGCCGGGACGAAGCTGGCGCTGCTG AAGCGCGCCATGAGCTTCGTGATCCAGGCGCTCGGCCCCGGCGACCGGCTGTCCGTCGTC ACGTTCTCGTCGTCGGCGAGGAGGCTGTTCCCGCTGAGGAAGATGACGGAGTCCGGGCGG CAGCGCGCGTTGCAGAGGGTGAGCTCGCTCGTCGCCGACGGCGGCACCAACATCGCCGAC GCGCTGAGGAAGGCGGCGAGGGTGATGGAGGACAGGAGGGAGAGGAACCCCGTGTGCAGC ATCGTCCTCCTCTCCGACGGCCGGGACACCTACACCGTCCCGGTGCCGCGCGGCGGCGGC GGCGGCGGCGACCAGCCGGACTACGCCGTGCTCGTCCCGAGCTCGCTCCTTCCCGGTGGC GGGTCGGCGCGCCACGTGCAGCGCGCCACGGCGCGCGGCGACTCGACGGAGCTCACCAGC GTCATCCATACCTACCAGACGCCCTTCATGGTCGACATGCTGCAGCGCTCGCAGACGCTC CAGCCGGAGGTCGTCGTGGCGATGAGCCGCTCGGCGCCGCTACCGGCGCCGTCCCTGTCG CTGTCGCCGCCGCCGCCGCCGTCGCAGCTGCGGCGCCGCTCGGTGAGGCCGGCCATGTCG TTCCCCGGGCGGCGTTCGTGA