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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0464300-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:17132122:17132676:-1 gene:Os10g0464300 gene_biotype:protein_coding transcript_biotype:protein_coding description:AWPM-19-like family protein. (Os10t0464300-00)
Sequence

ATGGCGTTGGAGCATCTCGGGAGGAGGAACGTGGCGGGGTCGCTGCTGCTGCTGAACCTC
CTCATGTACGTCTTCTTGCTGGGGTTCGCCGGGTGGGCGCTCAACAGCTCCATCAAGAAC
GCCGGCGCCGACGTCGGCGTCGGCTGGGGGGAGCAGCCGTGGTCGCCGTACTACCGCCAG
AGCGCGTGGTTCGCCTCGAGGTTCCACCTCGCAACGTTCGCGGCGCTGGCGGGGGCGCTG
GGCGTCGCGGCGAAGGCGTCCGCGGCGTACCACGGCGGCCGCTCGGGCGCGTCGTGGCGG
CCGCAGGGGCTCGCCGCCGCGGCGTCGCTCGGCACCGCCGCGTGGGCGGCCACCGCGCTG
GCGTTCGGGGTGGCGTGCAGGGAGATCCACGACGCCGCCGCGGCGGGGCCCGCCGGCGCC
GCGCGCGGGTGGCGGATGCGCGCGCTGGAGGGGCTCACCGTGACGCTGGCGTTCACGCAG
CTCCTCTACGTGCTGCTGCTGCACGCCGCCGTCGCCGGCGAGCGCTGCGGCCTCGCCTGC
GCCGCCGACGCATGA

Peptide Sequence

PEP ID

Os10t0464300-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:17132122:17132676:-1 gene:Os10g0464300 transcript:Os10t0464300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:AWPM-19-like family protein. (Os10t0464300-00)
Sequence

MALEHLGRRNVAGSLLLLNLLMYVFLLGFAGWALNSSIKNAGADVGVGWGEQPWSPYYRQ
SAWFASRFHLATFAALAGALGVAAKASAAYHGGRSGASWRPQGLAAAASLGTAAWAATAL
AFGVACREIHDAAAAGPAGAARGWRMRALEGLTVTLAFTQLLYVLLLHAAVAGERCGLAC
AADA

Transcript Sequence

Transcript ID

Os10t0464300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:17132122:17132676:-1 gene:Os10g0464300 gene_biotype:protein_coding transcript_biotype:protein_coding description:AWPM-19-like family protein. (Os10t0464300-00)
Sequence

ATGGCGTTGGAGCATCTCGGGAGGAGGAACGTGGCGGGGTCGCTGCTGCTGCTGAACCTC
CTCATGTACGTCTTCTTGCTGGGGTTCGCCGGGTGGGCGCTCAACAGCTCCATCAAGAAC
GCCGGCGCCGACGTCGGCGTCGGCTGGGGGGAGCAGCCGTGGTCGCCGTACTACCGCCAG
AGCGCGTGGTTCGCCTCGAGGTTCCACCTCGCAACGTTCGCGGCGCTGGCGGGGGCGCTG
GGCGTCGCGGCGAAGGCGTCCGCGGCGTACCACGGCGGCCGCTCGGGCGCGTCGTGGCGG
CCGCAGGGGCTCGCCGCCGCGGCGTCGCTCGGCACCGCCGCGTGGGCGGCCACCGCGCTG
GCGTTCGGGGTGGCGTGCAGGGAGATCCACGACGCCGCCGCGGCGGGGCCCGCCGGCGCC
GCGCGCGGGTGGCGGATGCGCGCGCTGGAGGGGCTCACCGTGACGCTGGCGTTCACGCAG
CTCCTCTACGTGCTGCTGCTGCACGCCGCCGTCGCCGGCGAGCGCTGCGGCCTCGCCTGC
GCCGCCGACGCATGA