Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0463300-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:17074150:17075296:1 gene:Os10g0463300 gene_biotype:protein_coding transcript_biotype:protein_coding description:UspA domain containing protein. (Os10t0463300-01)
Sequence

ATGGCCCCGTTCATCGACCTCGGCCGCGGCGGGCCGACGGCGGCGCCGGGGAAGCCGAGG
CTGGTGATGATCATCGCCGACCCGGGGCGCGAGTCGACGGCGGCGATGGAGTGGGCGCTC
TCGCACGCCGTCGCCGAGGGGGACGCCATCCTGCTCCTCCACATCAACATGCCCCCCAAC
TCCGCGGGCGGCGCCGGGCCGTCGCGCACCGGCTCCGGCGGGAGCGCCGGGTCCCCGCTC
ACGGCGCTCCTCGGCGCCGGCGCCGCGGGGGACGCCGATTTCATGGAGACGATGAGCGCC
GCGTGCAAGGCGCGGCACCCGCGCGCCCGCGTCCGCGCCCTGCGCGTCGAGCCCGCCACC
GAGGGCCGCGAGGCCAAGGCCCAGACCATCCTCGCCGAGTCCCAGCGCCGCGGCGTCGAG
CTCCTCGTCATCGGCCACCGCCGCGTCTCCTCCTTCCTCGGGTTGAGGAGCCCGAGCGGG
TCGAGCCGAGCGCACGACAGCACGGCGGAGTTCTTGATCGAACACAGCAAGTGCGTGTGC
GTGAGTGTGCAGAAGAAGGGGCAGAACGCCGGCTACCTGCTCAACACCAAGACGCACAAG
AACTTTTGGCTCCTCGCTTGA

Peptide Sequence

PEP ID

Os10t0463300-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:17074150:17075296:1 gene:Os10g0463300 transcript:Os10t0463300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:UspA domain containing protein. (Os10t0463300-01)
Sequence

MAPFIDLGRGGPTAAPGKPRLVMIIADPGRESTAAMEWALSHAVAEGDAILLLHINMPPN
SAGGAGPSRTGSGGSAGSPLTALLGAGAAGDADFMETMSAACKARHPRARVRALRVEPAT
EGREAKAQTILAESQRRGVELLVIGHRRVSSFLGLRSPSGSSRAHDSTAEFLIEHSKCVC
VSVQKKGQNAGYLLNTKTHKNFWLLA

Transcript Sequence

Transcript ID

Os10t0463300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:17074150:17075296:1 gene:Os10g0463300 gene_biotype:protein_coding transcript_biotype:protein_coding description:UspA domain containing protein. (Os10t0463300-01)
Sequence

GACAAACGCGCGTAGATCTCCCCCATTAGGCTCGTGTCGTGTGTCCGCCAGCTGCGCGCA
GGCCGGCGACGAAGCTGCGTGCGCGCGGCAACGTCGGCCGGCCGCAGCAATGGCCCCGTT
CATCGACCTCGGCCGCGGCGGGCCGACGGCGGCGCCGGGGAAGCCGAGGCTGGTGATGAT
CATCGCCGACCCGGGGCGCGAGTCGACGGCGGCGATGGAGTGGGCGCTCTCGCACGCCGT
CGCCGAGGGGGACGCCATCCTGCTCCTCCACATCAACATGCCCCCCAACTCCGCGGGCGG
CGCCGGGCCGTCGCGCACCGGCTCCGGCGGGAGCGCCGGGTCCCCGCTCACGGCGCTCCT
CGGCGCCGGCGCCGCGGGGGACGCCGATTTCATGGAGACGATGAGCGCCGCGTGCAAGGC
GCGGCACCCGCGCGCCCGCGTCCGCGCCCTGCGCGTCGAGCCCGCCACCGAGGGCCGCGA
GGCCAAGGCCCAGACCATCCTCGCCGAGTCCCAGCGCCGCGGCGTCGAGCTCCTCGTCAT
CGGCCACCGCCGCGTCTCCTCCTTCCTCGGGTTGAGGAGCCCGAGCGGGTCGAGCCGAGC
GCACGACAGCACGGCGGAGTTCTTGATCGAACACAGCAAGTGCGTGTGCGTGAGTGTGCA
GAAGAAGGGGCAGAACGCCGGCTACCTGCTCAACACCAAGACGCACAAGAACTTTTGGCT
CCTCGCTTGATCATGATCATCACGGCCTAGATAGTGATCCACACATCCATGCAGCTTCAT
ATATGTTAATGGATCGAACAAAAGCTCCAAAAACTTTTTTTTTTGATTCTTCTCGCAGCA
ATGCTTGTGTCAGACACGATCGATCAATCGAGTTAATTCTTCATTAATGCAGAAACAACG
AATCGAGAAAAGCAAAATAAAGTGTTGTTTTGTTTTTTAATCGAGAT