Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0458900-00
CDS Infomation	cds chromosome:IRGSP-1.0:10:16852034:16853554:-1 gene:Os10g0458900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exostosin-like family protein. (Os10t0458900-00)
Sequence	ATGGCGGCGAGTGTCGTGTCCGACAAGTCCAGCGGCGGAGCGAGCTTGCTCCGGCCGTCG CGGGTCTTGTTCCTCGCCGTGCTCTCGACGGCGTTCTGGTCGGTGATATTCTACGCGCAC CACTCCGCCGTGCAAGGTAACGCGACCATGGCGTCCGTCTTGCTCCGGCCGTCGTCGTTC TCCCGCCCGCTGCTGACGTCGTTCCGGCTCATCGGCGGCGGGCTTGACCGGTGCGCCGGC CGGCGGGTGTACATGTACGAGCTCCCGCCGCGGTTCAACGCCGAGCTCGTCCGCGACTGC AGGCTGTACTCGAGGTCCATGGACGTGTGCAAGCTCGTCGTGAACGACGGGTTCGGCCCG GCGCTCCCCGGCGGAGGCGCGCTGCCGGAGCGGGACGTGTACGACACCGACCAGTACATG CTGGCGCTGATCTACCACGCGCGGATGCGGCGGTACGAGTGCCTCACCGGCGACGCGGCC GCCGCCGACGCGGTGTTCGTCCCGTTCTACGCCGGGTTCGACGCGGCGATGAACCTGATG AAGAGCGACCTCGCGGCGCGCGACGCGCTGCCGCGGCAGCTCGCCGAGTGGCTGGTGCGG CGGCCGGAGTGGCGCGCCATGGGCGGGCGCGACCACTTCATGGTCGCCGCGCGCCCCGTC TGGGACTTCTACCGCGGCGGCGACGACGGGTGGGGCAACGCGCTGCTCACCTACCCGGCG ATCCGCAACACGACGGTGCTCACCGTCGAGGCCAACCCGTGGAGGGGCATCGACTTTGGC GTGCCGTTCCCGTCCCACTTCCACCCGACCTCCGACGCCGACGTGCTCCGGTGGCAGGAC CGGATGCGGCGGCGCGGCCGCCGGTGGCTCTGGGCGTTCGCCGGCGCGCCGCGGCCCGGG AGCACCAAGACGGTGCGCGCCCAGATCATCGAGCAGTGCACCGCGTCGCCGTCCTGCACC CACTTCGGGAGCTCGCCGGGGCACTACAACTCGCCGGGGCGGATCATGGAGCTCCTCGAG TCCGCCGCGTTCTGCGTCCAGCCGCGCGGCGACTCCTACACCCGCAAGTCGACGTTCGAC TCCATGCTCGCCGGCTGCATCCCGGTGTTCCTCCACCCGGCGTCGGCGTACACCCAGTAC ACGTGGCACCTGCCGAGGGACTACCGGAGCTACTCGGTGTTCGTCCCCCACACCGACGTC GTCGCCGGCGGCCGGAACGCGAGCATCGAGGCGGCGCTGAGGAGGATCCCGGCGGCGACG GTGGCGAGGATGCGGGAGGAGGTGATCCGGCTGATCCCGAGGATCACGTACAGGGACCCC GCGGCGACGCTGGTGACGTTCCGGGACGCGTTCGACGTCGCCGTCGACGCCGTGCTCGAC CGCGTGGCGAGGCGGCGGCGCGCCGCCGCCGAGGGGAGGGAGTACGTGGACGTGTTCGAC GGGCACGACAGCTGGAAGCACAACCTGCTCGACGACGGACAGACGCAGATCGGCCCGCAC GAGTTTGATCCATACCTGTAG

Peptide Sequence

PEP ID	Os10t0458900-00
PEP Infomation	pep chromosome:IRGSP-1.0:10:16852034:16853554:-1 gene:Os10g0458900 transcript:Os10t0458900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exostosin-like family protein. (Os10t0458900-00)
Sequence	MAASVVSDKSSGGASLLRPSRVLFLAVLSTAFWSVIFYAHHSAVQGNATMASVLLRPSSF SRPLLTSFRLIGGGLDRCAGRRVYMYELPPRFNAELVRDCRLYSRSMDVCKLVVNDGFGP ALPGGGALPERDVYDTDQYMLALIYHARMRRYECLTGDAAAADAVFVPFYAGFDAAMNLM KSDLAARDALPRQLAEWLVRRPEWRAMGGRDHFMVAARPVWDFYRGGDDGWGNALLTYPA IRNTTVLTVEANPWRGIDFGVPFPSHFHPTSDADVLRWQDRMRRRGRRWLWAFAGAPRPG STKTVRAQIIEQCTASPSCTHFGSSPGHYNSPGRIMELLESAAFCVQPRGDSYTRKSTFD SMLAGCIPVFLHPASAYTQYTWHLPRDYRSYSVFVPHTDVVAGGRNASIEAALRRIPAAT VARMREEVIRLIPRITYRDPAATLVTFRDAFDVAVDAVLDRVARRRRAAAEGREYVDVFD GHDSWKHNLLDDGQTQIGPHEFDPYL

Transcript Sequence

Transcript ID	Os10t0458900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:16852034:16853554:-1 gene:Os10g0458900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exostosin-like family protein. (Os10t0458900-00)
Sequence	ATGGCGGCGAGTGTCGTGTCCGACAAGTCCAGCGGCGGAGCGAGCTTGCTCCGGCCGTCG CGGGTCTTGTTCCTCGCCGTGCTCTCGACGGCGTTCTGGTCGGTGATATTCTACGCGCAC CACTCCGCCGTGCAAGGTAACGCGACCATGGCGTCCGTCTTGCTCCGGCCGTCGTCGTTC TCCCGCCCGCTGCTGACGTCGTTCCGGCTCATCGGCGGCGGGCTTGACCGGTGCGCCGGC CGGCGGGTGTACATGTACGAGCTCCCGCCGCGGTTCAACGCCGAGCTCGTCCGCGACTGC AGGCTGTACTCGAGGTCCATGGACGTGTGCAAGCTCGTCGTGAACGACGGGTTCGGCCCG GCGCTCCCCGGCGGAGGCGCGCTGCCGGAGCGGGACGTGTACGACACCGACCAGTACATG CTGGCGCTGATCTACCACGCGCGGATGCGGCGGTACGAGTGCCTCACCGGCGACGCGGCC GCCGCCGACGCGGTGTTCGTCCCGTTCTACGCCGGGTTCGACGCGGCGATGAACCTGATG AAGAGCGACCTCGCGGCGCGCGACGCGCTGCCGCGGCAGCTCGCCGAGTGGCTGGTGCGG CGGCCGGAGTGGCGCGCCATGGGCGGGCGCGACCACTTCATGGTCGCCGCGCGCCCCGTC TGGGACTTCTACCGCGGCGGCGACGACGGGTGGGGCAACGCGCTGCTCACCTACCCGGCG ATCCGCAACACGACGGTGCTCACCGTCGAGGCCAACCCGTGGAGGGGCATCGACTTTGGC GTGCCGTTCCCGTCCCACTTCCACCCGACCTCCGACGCCGACGTGCTCCGGTGGCAGGAC CGGATGCGGCGGCGCGGCCGCCGGTGGCTCTGGGCGTTCGCCGGCGCGCCGCGGCCCGGG AGCACCAAGACGGTGCGCGCCCAGATCATCGAGCAGTGCACCGCGTCGCCGTCCTGCACC CACTTCGGGAGCTCGCCGGGGCACTACAACTCGCCGGGGCGGATCATGGAGCTCCTCGAG TCCGCCGCGTTCTGCGTCCAGCCGCGCGGCGACTCCTACACCCGCAAGTCGACGTTCGAC TCCATGCTCGCCGGCTGCATCCCGGTGTTCCTCCACCCGGCGTCGGCGTACACCCAGTAC ACGTGGCACCTGCCGAGGGACTACCGGAGCTACTCGGTGTTCGTCCCCCACACCGACGTC GTCGCCGGCGGCCGGAACGCGAGCATCGAGGCGGCGCTGAGGAGGATCCCGGCGGCGACG GTGGCGAGGATGCGGGAGGAGGTGATCCGGCTGATCCCGAGGATCACGTACAGGGACCCC GCGGCGACGCTGGTGACGTTCCGGGACGCGTTCGACGTCGCCGTCGACGCCGTGCTCGAC CGCGTGGCGAGGCGGCGGCGCGCCGCCGCCGAGGGGAGGGAGTACGTGGACGTGTTCGAC GGGCACGACAGCTGGAAGCACAACCTGCTCGACGACGGACAGACGCAGATCGGCCCGCAC GAGTTTGATCCATACCTGTAG