Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0457500-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:16768975:16771729:-1 gene:Os10g0457500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Yeast ham (Hydroxylaminopurine sensitivity) related protein 1 (HAM-1- like protein). (Os10t0457500-01)
Sequence	ATGTCCGGGGCGGCGGCGGCGGCGGCGCGGGCGCTGCCCAAGGCGGTGACCTTCGTGACG GGCAACGCCAAGAAGCTGGAGGAAGTCCGCGCCATCCTCGGCTCCTCCATCCCCTTCCAG TCCCTCAAGCTCGACCTCCCTGAATTGCAAGGTGAGCCGGAGGACATATCTAAAGAGAAA GCACGAATGGCTGCATCCCAGGTGAATGGGCCTGTACTTGTTGAGGACACCTGCCTATGC TTCAATGCACTCAAAGGCTTACCAGGGCCCTACATAAAATGGTTCCTTGAGAAAACTGGG CATGAAGGTTTGAACAATTTGTTGCTAGCCTATGAAGATAAATCTGCTTTTGCTATGTGC ATCTTTTCTCTTGCTCTTGGACCAGGAGAAGAACCAATGACATTCGTTGGGAAAACAGCA GGAAAGATTGTGCCTGCTAGAGGACCTGCTGATTTTGGATGGGACCCAGTATTCCAACCA GATGGTTTTGATCAAACCTACGCTGAGATGCCCAAGTCAGTGAAGAATCAAATATCTCAC AGGGGAAAAGCTCTTGCTTTGGTGAAAGAACACTTTGCAGCTGCCAACTATAAAGTTCAG AACGATGGTTCAGCTTGA

Peptide Sequence

PEP ID	Os10t0457500-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:16768975:16771729:-1 gene:Os10g0457500 transcript:Os10t0457500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Yeast ham (Hydroxylaminopurine sensitivity) related protein 1 (HAM-1- like protein). (Os10t0457500-01)
Sequence	MSGAAAAAARALPKAVTFVTGNAKKLEEVRAILGSSIPFQSLKLDLPELQGEPEDISKEK ARMAASQVNGPVLVEDTCLCFNALKGLPGPYIKWFLEKTGHEGLNNLLLAYEDKSAFAMC IFSLALGPGEEPMTFVGKTAGKIVPARGPADFGWDPVFQPDGFDQTYAEMPKSVKNQISH RGKALALVKEHFAAANYKVQNDGSA

Transcript Sequence

Transcript ID	Os10t0457500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:16768975:16771729:-1 gene:Os10g0457500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Yeast ham (Hydroxylaminopurine sensitivity) related protein 1 (HAM-1- like protein). (Os10t0457500-01)
Sequence	TTTTGCTGGGCTAATCAATCTCTTCCTCCGGTCCGCCGCATCACCGTTCCTCCCGGCGGA AGCAGCGGCCAACACCGGAGCGCAGCAAGCATGTCCGGGGCGGCGGCGGCGGCGGCGCGG GCGCTGCCCAAGGCGGTGACCTTCGTGACGGGCAACGCCAAGAAGCTGGAGGAAGTCCGC GCCATCCTCGGCTCCTCCATCCCCTTCCAGTCCCTCAAGCTCGACCTCCCTGAATTGCAA GGTGAGCCGGAGGACATATCTAAAGAGAAAGCACGAATGGCTGCATCCCAGGTGAATGGG CCTGTACTTGTTGAGGACACCTGCCTATGCTTCAATGCACTCAAAGGCTTACCAGGGCCC TACATAAAATGGTTCCTTGAGAAAACTGGGCATGAAGGTTTGAACAATTTGTTGCTAGCC TATGAAGATAAATCTGCTTTTGCTATGTGCATCTTTTCTCTTGCTCTTGGACCAGGAGAA GAACCAATGACATTCGTTGGGAAAACAGCAGGAAAGATTGTGCCTGCTAGAGGACCTGCT GATTTTGGATGGGACCCAGTATTCCAACCAGATGGTTTTGATCAAACCTACGCTGAGATG CCCAAGTCAGTGAAGAATCAAATATCTCACAGGGGAAAAGCTCTTGCTTTGGTGAAAGAA CACTTTGCAGCTGCCAACTATAAAGTTCAGAACGATGGTTCAGCTTGAACTTGGTGATGA TCCGACTCCGTTGCGATTCTTGCCACTTCACCAAGTTGTGACAACCAATTAAAGATGTCA AATACATTAAATACGTCTCGCCTAGCTATCTGCTTGTGCAACATGCTCGGTGCCTGAATC TGAATGGGAGAATAAGTATCTTCTTCACCTATGCAAAGTGTAGCACAAGTATCTTCTTCA CTTATGCAACGTTAATCAGGCAGAAGAACATGCTGCAGAAGTGCAGATGCATCTTAATCA T