Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0457200-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:16755659:16761229:-1 gene:Os10g0457200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:dwarf and early-senescence leaf1 description:Pectate lyase (PEL) precursor, Maintenance of normal cell division, Induction of leaf senescence (Os10t0457200-01)
Sequence	ATGGCCGGGCCCGTCGAATCCACCCGCATTACCCTCCTCCTCGTCGCCGCCACCCTCCTC CTCCTCCCGCCGCCGCTCGCCGCCTCCCTCAACTCCTCCCTCCCCGACCCCGCCGCCGTC GTCGCCGACTTCCACAGCAAGGTGGCGACGTCGCGGCGGCGGATGCAGAAGGCCGACGGC GGCGGCGGCGGTGGCGGCGGGGGGTGTTTGACGGGGAACCCCATCGACCACTGCTGGCGG TGCGCCGGGACGGACTGGAGGCAGGACCGGCAGCGGCTGGCGGACTGCGGCATCGGGTTC GGGCGCAACGCCATGGGCGGCAAGGGCGGGCCGGTGTACGTCGTCACCGACCCCTCCGAC GGCGACCCGGTGAACCCCGCGCCGGGGACGCTCCGGTACGGCGCCATCCAGGAGGGCCCC CTCTGGATCGTGTTCGCCGGCGACATGACCATCCGCCTCAACGAGGAGCTCCTCGTGAAC AGCTACAAGACCATCGACGGCCGCGGCGCCAACGTCCACGTCGGCGCCGGCGGCGCGTGC ATCACGCTCCAGTACGTCTCCAACGTCATCATCCACAACATCCACGTCCACGACTGCGTC CCCGCCGGCAACGCCAACGTGCGCGCCTCGCCGACGCACTACGGGTGGCGCACCCGCTCC GACGGCGACGGCATCTCGCTCTACTCGGCGCGCGACGTGTGGGTGGACCACTGCGCGCTG TCGCGCTGCGCCGACGGCCTCATCGACGCCATCATGGGGTCCACGGCGATCACCGTGTCG AACAGCTACTTCTCGCACCACAACGAGGTGATGCTGCTGGGGCACAGCGACGGGTACCTG CCGGACTCGGCGATGCAGGTGACCATCGCGTTCAACCACTTCGGGATCCAGCTCGTGCAG CGGATGCCTCGGTGCAGGAGGGGGTACTTCCACATCGTCAACAACGACTACACGGCGTGG GAGATGTACGCCATTGGAGGGAGCGCGAGCCCCACCATCAACAGCCAGGGCAACCGCTAC ATCGCCCCCGCCGATCCCAACGCCAAGGAGGTGACGAAGCGGGTGGACACGGAGGAGGGG CAGTGGGCGGGGTGGAACTGGAGGACGGAGGGGGACATGATGGTCAACGGCGCCTTCTTC GTCCCCTCCGGCGAGGGCCTCGAGGCCATCTACGACAAGGCCTCCAGCACCGACCCCAAG TCGTCGGCGCTCGTCGACCAGCTCACCGCCGGCGCCGGCGTCCTCGGCGGCCCCAGGGAC AACGGCGAGGCGGCGGCGTACGCCGGCGTCAACTACGCCGGAGTTGGAACCGGCGGCGGA GGCGGTGGCGGCGCCGGTGCCGGCGGGATGGGGTATGGTTATCTCGGGATGGTCTATGGC AGCGGCGGCAATTGGAGCTGCCGAGCTGACCTGACACTGCAATTGACTTCATTGTTTCTT GCACTCTTTGCTCTCATATGCTTGCACCCATTGTGA

Peptide Sequence

PEP ID	Os10t0457200-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:16755659:16761229:-1 gene:Os10g0457200 transcript:Os10t0457200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:dwarf and early-senescence leaf1 description:Pectate lyase (PEL) precursor, Maintenance of normal cell division, Induction of leaf senescence (Os10t0457200-01)
Sequence	MAGPVESTRITLLLVAATLLLLPPPLAASLNSSLPDPAAVVADFHSKVATSRRRMQKADG GGGGGGGGCLTGNPIDHCWRCAGTDWRQDRQRLADCGIGFGRNAMGGKGGPVYVVTDPSD GDPVNPAPGTLRYGAIQEGPLWIVFAGDMTIRLNEELLVNSYKTIDGRGANVHVGAGGAC ITLQYVSNVIIHNIHVHDCVPAGNANVRASPTHYGWRTRSDGDGISLYSARDVWVDHCAL SRCADGLIDAIMGSTAITVSNSYFSHHNEVMLLGHSDGYLPDSAMQVTIAFNHFGIQLVQ RMPRCRRGYFHIVNNDYTAWEMYAIGGSASPTINSQGNRYIAPADPNAKEVTKRVDTEEG QWAGWNWRTEGDMMVNGAFFVPSGEGLEAIYDKASSTDPKSSALVDQLTAGAGVLGGPRD NGEAAAYAGVNYAGVGTGGGGGGGAGAGGMGYGYLGMVYGSGGNWSCRADLTLQLTSLFL ALFALICLHPL

Transcript Sequence

Transcript ID	Os10t0457200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:16755659:16761229:-1 gene:Os10g0457200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:dwarf and early-senescence leaf1 description:Pectate lyase (PEL) precursor, Maintenance of normal cell division, Induction of leaf senescence (Os10t0457200-01)
Sequence	ATGCCAATCTTCCCCTCCATGAAACATTCTCCATTCTCCCTCCTCCAAAGGCTCAAACAA ACCCCCTCTTTTAACAAGCAAGGAAGCCATCTCCCCCAGGTGATTCCATTTCACCTCCTC TCTCTCTCTCTCTCCTCCCCCAGCGAGTTCTCCCCTTCCTCCCCACCATTGCTGTCCAAT CCCAAGCTCCAAATTAAATCTCAAGAACTTCACCACCCAGCTGCTGATTCTCTCTCCAAA TCCACCATTTTCCACTCCCTCACTGTGCTCCACACTCTCCTGCATTGCTATAAAAATCCA CTGCATCTCCAGTTCTCCACTCCCAAATCCACCCAAGAACCAGCCGCCGCCATGGCCGGG CCCGTCGAATCCACCCGCATTACCCTCCTCCTCGTCGCCGCCACCCTCCTCCTCCTCCCG CCGCCGCTCGCCGCCTCCCTCAACTCCTCCCTCCCCGACCCCGCCGCCGTCGTCGCCGAC TTCCACAGCAAGGTGGCGACGTCGCGGCGGCGGATGCAGAAGGCCGACGGCGGCGGCGGC GGTGGCGGCGGGGGGTGTTTGACGGGGAACCCCATCGACCACTGCTGGCGGTGCGCCGGG ACGGACTGGAGGCAGGACCGGCAGCGGCTGGCGGACTGCGGCATCGGGTTCGGGCGCAAC GCCATGGGCGGCAAGGGCGGGCCGGTGTACGTCGTCACCGACCCCTCCGACGGCGACCCG GTGAACCCCGCGCCGGGGACGCTCCGGTACGGCGCCATCCAGGAGGGCCCCCTCTGGATC GTGTTCGCCGGCGACATGACCATCCGCCTCAACGAGGAGCTCCTCGTGAACAGCTACAAG ACCATCGACGGCCGCGGCGCCAACGTCCACGTCGGCGCCGGCGGCGCGTGCATCACGCTC CAGTACGTCTCCAACGTCATCATCCACAACATCCACGTCCACGACTGCGTCCCCGCCGGC AACGCCAACGTGCGCGCCTCGCCGACGCACTACGGGTGGCGCACCCGCTCCGACGGCGAC GGCATCTCGCTCTACTCGGCGCGCGACGTGTGGGTGGACCACTGCGCGCTGTCGCGCTGC GCCGACGGCCTCATCGACGCCATCATGGGGTCCACGGCGATCACCGTGTCGAACAGCTAC TTCTCGCACCACAACGAGGTGATGCTGCTGGGGCACAGCGACGGGTACCTGCCGGACTCG GCGATGCAGGTGACCATCGCGTTCAACCACTTCGGGATCCAGCTCGTGCAGCGGATGCCT CGGTGCAGGAGGGGGTACTTCCACATCGTCAACAACGACTACACGGCGTGGGAGATGTAC GCCATTGGAGGGAGCGCGAGCCCCACCATCAACAGCCAGGGCAACCGCTACATCGCCCCC GCCGATCCCAACGCCAAGGAGGTGACGAAGCGGGTGGACACGGAGGAGGGGCAGTGGGCG GGGTGGAACTGGAGGACGGAGGGGGACATGATGGTCAACGGCGCCTTCTTCGTCCCCTCC GGCGAGGGCCTCGAGGCCATCTACGACAAGGCCTCCAGCACCGACCCCAAGTCGTCGGCG CTCGTCGACCAGCTCACCGCCGGCGCCGGCGTCCTCGGCGGCCCCAGGGACAACGGCGAG GCGGCGGCGTACGCCGGCGTCAACTACGCCGGAGTTGGAACCGGCGGCGGAGGCGGTGGC GGCGCCGGTGCCGGCGGGATGGGGTATGGTTATCTCGGGATGGTCTATGGCAGCGGCGGC AATTGGAGCTGCCGAGCTGACCTGACACTGCAATTGACTTCATTGTTTCTTGCACTCTTT GCTCTCATATGCTTGCACCCATTGTGATTGTAAGATGCTTCATTATGATTCAATTGGAAA GGTTAGGAAAAAGGGGAGAAGAAAAAGGAAGCAAAAGGTGTTGACAGTTGACACTTAGGG AGTAGTAGGCAACAGTGTTACAGTGAGATGATATCCACCATGTAATGAGCACATGGATGG GAATATTGCAGGTTTAGCCAATGTAGTTGTTGCAAAGGGGAATGGGATTATTCAGACTAA CTT