Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0447900-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:16225413:16238841:1 gene:Os10g0447900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:silicon efflux transporter 5, Si efflux transporter 5 description:Similar to Citrate transporter family protein. (Os10t0447900-01)
Sequence	ATGGTGCTCGCGAGCACGCCGAAGGTGGTGCTGGGATGCGTGGCGTTCACGATCTTCTGG GTGCTGGCCGTGTTCCCGTCGGTGCCGTTCATGCCGGTGGGTCGCACGGCGGGGTCCCTC CTGGGCGCCATGCTGATGGTGCTCTTCCGCGTGATGACACCCGAGGAGGCGTACGCCGCC ATCGACCTCCCCATCCTCGGCCTCCTCTTCGGCACCATGGTCGTCTCCATCTTCCTGGAG CGCGCCGACATGTTCAAGTACCTCGGCAACATGCTGTCGTGGAAGAGCCGCGGCAGCAAG GACCTCCTCTTCCGCGTCTGCGTCGTCTCCGCCGTCGCCAGCGCGCTCTTCACCAACGAC ACCACCTGCGTCGTCCTCACCGAGTTCATCCTCAAGGTGGCGCGCCAGAACAACCTCCCG CCGCAGCCGTTCCTCCTCGCGCTCGCGTCGAGCTCCAACATCGGGTCGGCGGCGACGCCC ATCGGCAACCCGCAGAACCTCGTCATCGCCGTCGAGAGCGGCATCACGTTCGGCCAGTTC CTCCTCGGCGTGTTCCCGGCGATGGTCGTCGGCATCCTCGCCAACACCTGCATCCTCCTC TGCTACTTCTGGAGGTACCTCTCCGCCGACCGCGACCAGCTCGAGGGCGGCGGCGGCGCG CATGGTCCCGAGGTCGTCGCCGACGAGGAGGTCACCTCGCACCGGTTCACCCCGGCGAGG ATGTCCCACGCGTCGTCCGTCAACGACAGCGACTGCATCAGCGAGCCCATCCGCCGGAGC GAGAGCATGAACCGCGCCGACGCGCTCCGCAGCCGGAGCTACAACTCCGAGGGCGACATC CAGGTCGCCATCCGCTCGCTCCGGGCGTCGAGCCTGTCGCGCGAGATGGTGGAGGTGTCC ACCGTCTGCGACCGCCGCGACGTCGTCGTCGACGGCGGCGGCGGCGGCGGGCCGCGCAAG ATCACCAGGTCGACGAGCCACCAGCGGAGCGTCATCATCGAGGACGCGCCGGAGCAGCAC CAGCATCCGGCCGGCCTTTTCGACGGCGAGAAGGACAAGGACGACGAGGCGATCGGCAAG CGGCGGCGGTGGAAGGTGATCGTGTGGAAGTACGCCGTCTACCTCACCACCCTCGGCATG CTCGCCGCCCTCCTCCTCGGCCTCAACATGTCGTGGACCGCCATTACCGCCGCCCTCATC CTCCTCGCCCTCGACTTCACTGACGCCCAAGCTTGCCTCGAGAAGGTGTCATACTCGCTG CTGATCTTCTTCTGCGGGATGTTCATCACGGTGGATGGATTCAACAAGACTGGAATTCCA AACACTCTCTGGGAGCTCGTCGAGCCGTATGCGAGAATCGATAGCCCGAAAGGCGTCGTT CTTCTCGCGATCGTCATCCTTGTTCTGTCAAATGTGGCATCAAATGTTCCAACAGTTCTA CTGCTGGGCACAAGAGTGGCAGCATCAGCCGCAGCGATCTCCCCTGCATCGGAGAAGAAA GCCTGGCTGATCCTGGCCTGGGTGAGCACGGTGGCCGGCAACCTGACCCTCCTCGGCTCA GCCGCGAACCTGATCGTCTGCGAGCAGGCGAGGCGCGCGCAGTTCTTCGGGTACAACCTC ACCTTCTGGAGCCACCTCCGCTTCGGCGTGCCGTCGACGATCATCGTCACCGCCATCGGC CTTCTCATCGTCATGAGCTACTGA

Peptide Sequence

PEP ID	Os10t0447900-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:16225413:16238841:1 gene:Os10g0447900 transcript:Os10t0447900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:silicon efflux transporter 5, Si efflux transporter 5 description:Similar to Citrate transporter family protein. (Os10t0447900-01)
Sequence	MVLASTPKVVLGCVAFTIFWVLAVFPSVPFMPVGRTAGSLLGAMLMVLFRVMTPEEAYAA IDLPILGLLFGTMVVSIFLERADMFKYLGNMLSWKSRGSKDLLFRVCVVSAVASALFTND TTCVVLTEFILKVARQNNLPPQPFLLALASSSNIGSAATPIGNPQNLVIAVESGITFGQF LLGVFPAMVVGILANTCILLCYFWRYLSADRDQLEGGGGAHGPEVVADEEVTSHRFTPAR MSHASSVNDSDCISEPIRRSESMNRADALRSRSYNSEGDIQVAIRSLRASSLSREMVEVS TVCDRRDVVVDGGGGGGPRKITRSTSHQRSVIIEDAPEQHQHPAGLFDGEKDKDDEAIGK RRRWKVIVWKYAVYLTTLGMLAALLLGLNMSWTAITAALILLALDFTDAQACLEKVSYSL LIFFCGMFITVDGFNKTGIPNTLWELVEPYARIDSPKGVVLLAIVILVLSNVASNVPTVL LLGTRVAASAAAISPASEKKAWLILAWVSTVAGNLTLLGSAANLIVCEQARRAQFFGYNL TFWSHLRFGVPSTIIVTAIGLLIVMSY

Transcript Sequence

Transcript ID	Os10t0447900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:16225413:16238841:1 gene:Os10g0447900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:silicon efflux transporter 5, Si efflux transporter 5 description:Similar to Citrate transporter family protein. (Os10t0447900-01)
Sequence	CTAGCTCCACCAGCCATTTCTCCCCCCCATCTCCTCTCTGCTTGCGAGCTTGTCAACCGC GCAAAGGTTCATATATACACCGATCGAAATCGATCGGTGTAGAGCCACACTCTTGGAGTC GATCGTTCGCTGGTTAGCTAACTAAGCTAAGCTGAGCTGCCTTGCTCTCTTCGACGATCA GGTTGCTTGGTTTGACGAGCTGACGATCGAGGAGAAGAGGACGGCGAACGTTTTTTTGCA GGATCAGTACTAGGGTTCATCTTGGAGAACCAATTTGATTCGATAGAACGAGCGAGTCGA AGAAGATGGTGCTCGCGAGCACGCCGAAGGTGGTGCTGGGATGCGTGGCGTTCACGATCT TCTGGGTGCTGGCCGTGTTCCCGTCGGTGCCGTTCATGCCGGTGGGTCGCACGGCGGGGT CCCTCCTGGGCGCCATGCTGATGGTGCTCTTCCGCGTGATGACACCCGAGGAGGCGTACG CCGCCATCGACCTCCCCATCCTCGGCCTCCTCTTCGGCACCATGGTCGTCTCCATCTTCC TGGAGCGCGCCGACATGTTCAAGTACCTCGGCAACATGCTGTCGTGGAAGAGCCGCGGCA GCAAGGACCTCCTCTTCCGCGTCTGCGTCGTCTCCGCCGTCGCCAGCGCGCTCTTCACCA ACGACACCACCTGCGTCGTCCTCACCGAGTTCATCCTCAAGGTGGCGCGCCAGAACAACC TCCCGCCGCAGCCGTTCCTCCTCGCGCTCGCGTCGAGCTCCAACATCGGGTCGGCGGCGA CGCCCATCGGCAACCCGCAGAACCTCGTCATCGCCGTCGAGAGCGGCATCACGTTCGGCC AGTTCCTCCTCGGCGTGTTCCCGGCGATGGTCGTCGGCATCCTCGCCAACACCTGCATCC TCCTCTGCTACTTCTGGAGGTACCTCTCCGCCGACCGCGACCAGCTCGAGGGCGGCGGCG GCGCGCATGGTCCCGAGGTCGTCGCCGACGAGGAGGTCACCTCGCACCGGTTCACCCCGG CGAGGATGTCCCACGCGTCGTCCGTCAACGACAGCGACTGCATCAGCGAGCCCATCCGCC GGAGCGAGAGCATGAACCGCGCCGACGCGCTCCGCAGCCGGAGCTACAACTCCGAGGGCG ACATCCAGGTCGCCATCCGCTCGCTCCGGGCGTCGAGCCTGTCGCGCGAGATGGTGGAGG TGTCCACCGTCTGCGACCGCCGCGACGTCGTCGTCGACGGCGGCGGCGGCGGCGGGCCGC GCAAGATCACCAGGTCGACGAGCCACCAGCGGAGCGTCATCATCGAGGACGCGCCGGAGC AGCACCAGCATCCGGCCGGCCTTTTCGACGGCGAGAAGGACAAGGACGACGAGGCGATCG GCAAGCGGCGGCGGTGGAAGGTGATCGTGTGGAAGTACGCCGTCTACCTCACCACCCTCG GCATGCTCGCCGCCCTCCTCCTCGGCCTCAACATGTCGTGGACCGCCATTACCGCCGCCC TCATCCTCCTCGCCCTCGACTTCACTGACGCCCAAGCTTGCCTCGAGAAGGTGTCATACT CGCTGCTGATCTTCTTCTGCGGGATGTTCATCACGGTGGATGGATTCAACAAGACTGGAA TTCCAAACACTCTCTGGGAGCTCGTCGAGCCGTATGCGAGAATCGATAGCCCGAAAGGCG TCGTTCTTCTCGCGATCGTCATCCTTGTTCTGTCAAATGTGGCATCAAATGTTCCAACAG TTCTACTGCTGGGCACAAGAGTGGCAGCATCAGCCGCAGCGATCTCCCCTGCATCGGAGA AGAAAGCCTGGCTGATCCTGGCCTGGGTGAGCACGGTGGCCGGCAACCTGACCCTCCTCG GCTCAGCCGCGAACCTGATCGTCTGCGAGCAGGCGAGGCGCGCGCAGTTCTTCGGGTACA ACCTCACCTTCTGGAGCCACCTCCGCTTCGGCGTGCCGTCGACGATCATCGTCACCGCCA TCGGCCTTCTCATCGTCATGAGCTACTGATGAACAAGCCTCAAATGGAGAAGAAGAAGTA AGTAAGTAGCAGCAATCGAAATCACGTAGCAGCAGTACAAGATTGAAGGTTTTACTACTA CTACTACTATTTCAGCTGGTTTCTTCCACAAAGGTAAAGAAGAATGGAAGGAAGCAGCTG TGGATATGATGGATGCAGATGGGGACTGAACTGAAATACTAGGTTCAGCTGAGAAAAAAC AATGTGATACTTTGTAATGTGTTTTTTGTTGTTATAGCTGGGTTTTGTGTTCTGTACTTG TAATCTTTTAATCCATGCATGCATGCGCGAAGCAAAATTAAGCGCGAGGTTGTGTCGCTA ATTAATCTGCTGAAAAGCAAAAAAATAAGTGGGGGCAGATTATTGTTTGTAGATGATGAT AATTAATGACCCAGTCGATGGAACTTGGAATTAGTCGGCGTACTTTGTACCCTGTTGTAA GGTGAAGCAAGGCCTTTGATAGGAATGGATATATGGTGATGTTATTTTGCT