Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0445600-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:16096849:16098550:-1 gene:Os10g0445600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAF1 description:Conserved hypothetical protein. (Os10t0445600-01)
Sequence	ATGCTCTCCCTCTCCCACCCCCACCCCCACCCCGCCTCCACCACGGCGGCGGCGGCGGCG CGCCACCACCACCGCCGGAACGCCCCCTTCGCGCCGCACCACCGCCGCCGCCGCCGCTTC GCGCACCTGACGACCTCCGCCGTCATCCTGGGCCCCGACGGGCGGCCCATCGGCGGCGGG CCGCGCGACAACAAGCTCCCCTTCACCCCTCCCCCCACCGCGCCGCCCGACCAGCTCTAC CAGCCGTTCCATCCGCCGCCGTCGCCGCTCCCCGACAAGTACAAGGACCTCGACCTCGGC CAGCGCCTCGCTGTGCTCCGGGACCGCCTCGGGCTTTGGCACGAGTACGCGCCGCTCATC TCCGCGCTGTCGAGGGAAGGGTTCACGCCGTCGTCGATCGAGGAGGCCACGGGGATCTCC GGCGTCGAGCAGAACAGCGTCGTCGTCGCCACCCAGGTCCGCGACTCGCTCGTCGCCGAC GAGGGCGGCTTCCCCGCCGAGCTCCTCCGCTACTTCGACTCCTACGGCGGGCCCGAGCTG CTCTACGAGCTCCGGTTCCTCAACGCGAGGCAGCGCGCCGACGCGGCGAGGCACGCCATC GACCGCCGCCTGGAGCCACGCGGGGTGCGCGAGCTCGCCCGCTCCATGAAGGACTTCCCG CAACGCCGCGGCGACGACGGGTGGGAGGCCTTCACGCGGGACAACCCCGGGGACTGCCTC GCCTTCGCGCGGTTCCGCCAGTCGCGTGAGGCCATCGACGCCGAGGACTCCGTGGCGGAG CTGGAGCGCGCGCTGGAGGTTGTGGACACGGAGCCCGCGAGGGCGCGGGTGGAGGCGGAG CTCGACCGCGCGAGGAGGAAGGCCGCCGGGGAGGAGGTGGACGACGAGGACGGCGCCGCC AACGCCGCCGCCGCCGCGTCGCGCCCTGCCGTGCCCGTGGTGCGGCTCATGTACGGCGAG GTGGCGGAGGCGACGACCGTGCTGCTGCTCCCGGTGGTGCGCGAGGGCGACGGCGGCGAG GCGCTCGCCCACGCGCCGAGGCGGACCAGGACGGACGCGGACCTCGGCATGGTGGAGGTG GACAAGGGGTGGACGCGGTGGGCGGTGGTGCCCGGGTGGGGCCCCGTGGCGGAGGTAGCC GGCGAGGCGGTGGTGATCGAGCTCGCCGACGGGCGCACGCTGCCGTGGCGGTCGGCGGAG GCGGAGCGGGTGCTGGTGGTGGCGAACCGCGGGCGGAGGGAGGTGGTCGAGGACGGCATC TACGTGGTGGAGAGGGAGGGGAGGCTGGTGGTGGAGAAGGGGAGGAAGCTGGCGGCGGAG GGCGTCGGCGAGGCCGCCGCCGAGGTGCTCGTCGTCGTCCGGCCGCCCAGGGACGAGGAC GACATGATCAGCGACGACGAGTGGGACTGA

Peptide Sequence

PEP ID	Os10t0445600-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:16096849:16098550:-1 gene:Os10g0445600 transcript:Os10t0445600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAF1 description:Conserved hypothetical protein. (Os10t0445600-01)
Sequence	MLSLSHPHPHPASTTAAAAARHHHRRNAPFAPHHRRRRRFAHLTTSAVILGPDGRPIGGG PRDNKLPFTPPPTAPPDQLYQPFHPPPSPLPDKYKDLDLGQRLAVLRDRLGLWHEYAPLI SALSREGFTPSSIEEATGISGVEQNSVVVATQVRDSLVADEGGFPAELLRYFDSYGGPEL LYELRFLNARQRADAARHAIDRRLEPRGVRELARSMKDFPQRRGDDGWEAFTRDNPGDCL AFARFRQSREAIDAEDSVAELERALEVVDTEPARARVEAELDRARRKAAGEEVDDEDGAA NAAAAASRPAVPVVRLMYGEVAEATTVLLLPVVREGDGGEALAHAPRRTRTDADLGMVEV DKGWTRWAVVPGWGPVAEVAGEAVVIELADGRTLPWRSAEAERVLVVANRGRREVVEDGI YVVEREGRLVVEKGRKLAAEGVGEAAAEVLVVVRPPRDEDDMISDDEWD

Transcript Sequence

Transcript ID	Os10t0445600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:16096849:16098550:-1 gene:Os10g0445600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAF1 description:Conserved hypothetical protein. (Os10t0445600-01)
Sequence	GATATGAGATAAGCCCCCCCGGCACCCTTATCACCACCACCACCGCCACCATGCTCTCCC TCTCCCACCCCCACCCCCACCCCGCCTCCACCACGGCGGCGGCGGCGGCGCGCCACCACC ACCGCCGGAACGCCCCCTTCGCGCCGCACCACCGCCGCCGCCGCCGCTTCGCGCACCTGA CGACCTCCGCCGTCATCCTGGGCCCCGACGGGCGGCCCATCGGCGGCGGGCCGCGCGACA ACAAGCTCCCCTTCACCCCTCCCCCCACCGCGCCGCCCGACCAGCTCTACCAGCCGTTCC ATCCGCCGCCGTCGCCGCTCCCCGACAAGTACAAGGACCTCGACCTCGGCCAGCGCCTCG CTGTGCTCCGGGACCGCCTCGGGCTTTGGCACGAGTACGCGCCGCTCATCTCCGCGCTGT CGAGGGAAGGGTTCACGCCGTCGTCGATCGAGGAGGCCACGGGGATCTCCGGCGTCGAGC AGAACAGCGTCGTCGTCGCCACCCAGGTCCGCGACTCGCTCGTCGCCGACGAGGGCGGCT TCCCCGCCGAGCTCCTCCGCTACTTCGACTCCTACGGCGGGCCCGAGCTGCTCTACGAGC TCCGGTTCCTCAACGCGAGGCAGCGCGCCGACGCGGCGAGGCACGCCATCGACCGCCGCC TGGAGCCACGCGGGGTGCGCGAGCTCGCCCGCTCCATGAAGGACTTCCCGCAACGCCGCG GCGACGACGGGTGGGAGGCCTTCACGCGGGACAACCCCGGGGACTGCCTCGCCTTCGCGC GGTTCCGCCAGTCGCGTGAGGCCATCGACGCCGAGGACTCCGTGGCGGAGCTGGAGCGCG CGCTGGAGGTTGTGGACACGGAGCCCGCGAGGGCGCGGGTGGAGGCGGAGCTCGACCGCG CGAGGAGGAAGGCCGCCGGGGAGGAGGTGGACGACGAGGACGGCGCCGCCAACGCCGCCG CCGCCGCGTCGCGCCCTGCCGTGCCCGTGGTGCGGCTCATGTACGGCGAGGTGGCGGAGG CGACGACCGTGCTGCTGCTCCCGGTGGTGCGCGAGGGCGACGGCGGCGAGGCGCTCGCCC ACGCGCCGAGGCGGACCAGGACGGACGCGGACCTCGGCATGGTGGAGGTGGACAAGGGGT GGACGCGGTGGGCGGTGGTGCCCGGGTGGGGCCCCGTGGCGGAGGTAGCCGGCGAGGCGG TGGTGATCGAGCTCGCCGACGGGCGCACGCTGCCGTGGCGGTCGGCGGAGGCGGAGCGGG TGCTGGTGGTGGCGAACCGCGGGCGGAGGGAGGTGGTCGAGGACGGCATCTACGTGGTGG AGAGGGAGGGGAGGCTGGTGGTGGAGAAGGGGAGGAAGCTGGCGGCGGAGGGCGTCGGCG AGGCCGCCGCCGAGGTGCTCGTCGTCGTCCGGCCGCCCAGGGACGAGGACGACATGATCA GCGACGACGAGTGGGACTGAGGATTTTGAGAGAGGGTTTTTTCTTCTCGGTAATGCGTAA TTTTCTCTTGGTAAAAAAACACAAAATCTCTCCCTAATTCTCATCATTTCATAGTTCATG AATGGATTATTAGGGGAAATCAGTTGTTTCTTTTTATTACAGTATAAACTCATAGGGAAC ATGGCAGATGCGATGCTCTGGCCTTTGTCATTGCTTAATTTCTTCAAATAAGATGATCAA ATACAATAATGTTATATTGCTG