Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0444100-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:15997619:16000815:1 gene:Os10g0444100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os10t0444100-01)
Sequence

ATGGAGAAGGCGGTAGCGGCGGCTTGTGGATGGAGGAAGGGTTTGGAGGAGGGAGAGCCG
GAGTGGGAAGCGATGGAGCTGGAGGCGGCGGCGCCGGCGATCTTTCCGGCGGACGGTGGC
GGCGGCGGCGTCAGGAGGAGTCCGGCGGCGTCGACGATCTTCTTGCCAGATCTTCTAGAC
GGGAGCTTTCTTTCTGACGATGATCTAAGCCAGATGGAGGATATATTTCAACCAGCACAT
GAGGATGACATCCACCATTTGTTACAAGGGCCCCAAGATGAAGCAGACCTGGACAAATGG
TTAGCAGGTCAATCTTGTTCACCCGCAGCGGAAGGCTCCATAACAGTCCAAACACCTACA
TATCCCATACTAAATCTTATAGATTTCATACCAAAGGACGGTTGTAAACGTGGCCCACGA
GGTGCTCGCAAGAGACAGACATTTCCATCACGAGGTGCTCGCACGAGACGGGCTTTTCCA
TTGCAACAACTATGCTTTGGAACCACTAGAGACAAAAGATGTCGTCTAAGAAAAAATAAT
GATCACTGGACAATCAAAGAAGTAAAAAATTTGGTACAAGGTGTTTCCAAGCATGGGGTT
GGACGATGGACAGAATTGAAGAGAGATTTTTTCTCCACATCCATTCGAACTTCTGTCCAT
CTGAAGGATAAATGGAGGAACCTGTTGAAAGCATGTGGGATCGATTTCACCTCCACAGCA
AAGGGAAAAGCACAGAAGACAATGCTATGGCCCCTTGATAAACGATTGACTGAACAGATT
ATACAGTTAGCATATAAACACCCTTACCCAAGACAAAAGTACTAG

Peptide Sequence

PEP ID

Os10t0444100-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:15997619:16000815:1 gene:Os10g0444100 transcript:Os10t0444100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os10t0444100-01)
Sequence

MEKAVAAACGWRKGLEEGEPEWEAMELEAAAPAIFPADGGGGGVRRSPAASTIFLPDLLD
GSFLSDDDLSQMEDIFQPAHEDDIHHLLQGPQDEADLDKWLAGQSCSPAAEGSITVQTPT
YPILNLIDFIPKDGCKRGPRGARKRQTFPSRGARTRRAFPLQQLCFGTTRDKRCRLRKNN
DHWTIKEVKNLVQGVSKHGVGRWTELKRDFFSTSIRTSVHLKDKWRNLLKACGIDFTSTA
KGKAQKTMLWPLDKRLTEQIIQLAYKHPYPRQKY

Transcript Sequence

Transcript ID

Os10t0444100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:15997619:16000815:1 gene:Os10g0444100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os10t0444100-01)
Sequence

CTCTTTCTCTCTCGTCTTCTTCGCCTCCCTCCCTCCGCCGCGCCTCCCCATCCCCTCCGC
CGCCGCCGCTCTCCGCTCTTCCGGTCTCCTCGGCGATCTGCGCGGCCAATCGCACAGGCG
GGGCGCGCGCGCGGTGAAGGATCGCTCCAGTGAGGTGAGTGCAGGGGAGCTCTGCATCAG
CTGGGCCATGGAGAAGGCGGTAGCGGCGGCTTGTGGATGGAGGAAGGGTTTGGAGGAGGG
AGAGCCGGAGTGGGAAGCGATGGAGCTGGAGGCGGCGGCGCCGGCGATCTTTCCGGCGGA
CGGTGGCGGCGGCGGCGTCAGGAGGAGTCCGGCGGCGTCGACGATCTTCTTGCCAGATCT
TCTAGACGGGAGCTTTCTTTCTGACGATGATCTAAGCCAGATGGAGGATATATTTCAACC
AGCACATGAGGATGACATCCACCATTTGTTACAAGGGCCCCAAGATGAAGCAGACCTGGA
CAAATGGTTAGCAGGTCAATCTTGTTCACCCGCAGCGGAAGGCTCCATAACAGTCCAAAC
ACCTACATATCCCATACTAAATCTTATAGATTTCATACCAAAGGACGGTTGTAAACGTGG
CCCACGAGGTGCTCGCAAGAGACAGACATTTCCATCACGAGGTGCTCGCACGAGACGGGC
TTTTCCATTGCAACAACTATGCTTTGGAACCACTAGAGACAAAAGATGTCGTCTAAGAAA
AAATAATGATCACTGGACAATCAAAGAAGTAAAAAATTTGGTACAAGGTGTTTCCAAGCA
TGGGGTTGGACGATGGACAGAATTGAAGAGAGATTTTTTCTCCACATCCATTCGAACTTC
TGTCCATCTGAAGGATAAATGGAGGAACCTGTTGAAAGCATGTGGGATCGATTTCACCTC
CACAGCAAAGGGAAAAGCACAGAAGACAATGCTATGGCCCCTTGATAAACGATTGACTGA
ACAGATTATACAGTTAGCATATAAACACCCTTACCCAAGACAAAAGTACTAGAATAGTTA
CTGGTTGTTCTAGCAGAGAAAGCAACTGGTAGAAGAGTCAGAAGGTATCAGAGCATATAG
TAGAGTTGATTTTAGTCAGGACCATCAGTAGATTTATCTCCTCCTTAACTAGTAGCTACT
GAAATTTAAACGTTTTTTTGTCGTTTTGGTTACAATTTCCTCTCCACATTTGGGATTTTG
TAATTGGATTGTAAATACTGTCTTATTGACAAATTGGAGGGGGTTCAGTCTCCAGGATCT
TACTTGGTTTTACTG