Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0443200-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:15946268:15950066:1 gene:Os10g0443200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to translin-like protein [Oryza sativa (japonica cultivar-group)]. (Os10t0443200-01)
Sequence	GCAGCCACCGCCACCGCCGCGCTCCGACTCCGAGCCGCCTTCCTCTCCCCTCCTCCTCCT CCCGCCGCCGCCGCCGCCTCCGCAGCCGCAGCTTCGAGGCTCCTCCCTCGCCGGCCCACC GCCTCCATCCTCCTCCTCCCCCTGCGCCGCCTCTGCTCCGTCCCTCCCCACGCGGTAGGC GACGCCGGCACCGGAAGCAGCTCCCAGCCGTCGCCGGTGATGGACGCGCAGTTCGAGTCC TTCCGCGCGCAGCTCGACGAGTCCTCCACGCTCCGCGACCGCATCCGCGCCGTCGTCTCC GAGGTCGAGTCCGCCTCCCGCGTCGCCTCCGCCGCGCTCCTCCTCGTGCACCAGCCCGTC CCCCTCGCAGATGTGCTCGGGAAGGCGAAGGCGCAGGTGGAGGTGATCAAGGGGCTCTAC TCGCGGCTCGCCGAGATCCTCAAGGAGTGCCCGGGCCAGTACTACAGGTACCACGGCGAT TGGAGGAGCGAGACGCAGGCGGTGGTGTCGATGCTCGCCTTCATGCACTGGCTTGAGACC GGCGGCCTCCTCATGCACGCCGAGGCCCAGGAGAAGCTAGGATTGAGCTCCGGGGAGTTT GGCCTGGATGTTGAAGATTACCTTACTGGATTGTGCTTCATGTCCAACGATTTCCCGAGA TATGTAGTGAACCGTGTCACTGCTGGAGACTATGACTGTCCAAGAAAGGTGTTGTCATTT CTGACAGACCTTCATGCTTCATTTAGGATGCTGAACCTGCGCAATGACTTTCTACGTAAG AAGTTTGATGGGATGAAGTATGATTTGAGGAGGGTAGAGGAGGTGTATTATGATGTGAAG ATTCGAGGACTTGTACCAGGGGAGTCCAAACAAGAGGCAGCTTAG

Peptide Sequence

PEP ID	Os10t0443200-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:15946268:15950066:1 gene:Os10g0443200 transcript:Os10t0443200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to translin-like protein [Oryza sativa (japonica cultivar-group)]. (Os10t0443200-01)
Sequence	AATATAALRLRAAFLSPPPPPAAAAASAAAASRLLPRRPTASILLLPLRRLCSVPPHAVG DAGTGSSSQPSPVMDAQFESFRAQLDESSTLRDRIRAVVSEVESASRVASAALLLVHQPV PLADVLGKAKAQVEVIKGLYSRLAEILKECPGQYYRYHGDWRSETQAVVSMLAFMHWLET GGLLMHAEAQEKLGLSSGEFGLDVEDYLTGLCFMSNDFPRYVVNRVTAGDYDCPRKVLSF LTDLHASFRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGLVPGESKQEAA

Transcript Sequence

Transcript ID	Os10t0443200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:15946268:15950066:1 gene:Os10g0443200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to translin-like protein [Oryza sativa (japonica cultivar-group)]. (Os10t0443200-01)
Sequence	GCAGCCACCGCCACCGCCGCGCTCCGACTCCGAGCCGCCTTCCTCTCCCCTCCTCCTCCT CCCGCCGCCGCCGCCGCCTCCGCAGCCGCAGCTTCGAGGCTCCTCCCTCGCCGGCCCACC GCCTCCATCCTCCTCCTCCCCCTGCGCCGCCTCTGCTCCGTCCCTCCCCACGCGGTAGGC GACGCCGGCACCGGAAGCAGCTCCCAGCCGTCGCCGGTGATGGACGCGCAGTTCGAGTCC TTCCGCGCGCAGCTCGACGAGTCCTCCACGCTCCGCGACCGCATCCGCGCCGTCGTCTCC GAGGTCGAGTCCGCCTCCCGCGTCGCCTCCGCCGCGCTCCTCCTCGTGCACCAGCCCGTC CCCCTCGCAGATGTGCTCGGGAAGGCGAAGGCGCAGGTGGAGGTGATCAAGGGGCTCTAC TCGCGGCTCGCCGAGATCCTCAAGGAGTGCCCGGGCCAGTACTACAGGTACCACGGCGAT TGGAGGAGCGAGACGCAGGCGGTGGTGTCGATGCTCGCCTTCATGCACTGGCTTGAGACC GGCGGCCTCCTCATGCACGCCGAGGCCCAGGAGAAGCTAGGATTGAGCTCCGGGGAGTTT GGCCTGGATGTTGAAGATTACCTTACTGGATTGTGCTTCATGTCCAACGATTTCCCGAGA TATGTAGTGAACCGTGTCACTGCTGGAGACTATGACTGTCCAAGAAAGGTGTTGTCATTT CTGACAGACCTTCATGCTTCATTTAGGATGCTGAACCTGCGCAATGACTTTCTACGTAAG AAGTTTGATGGGATGAAGTATGATTTGAGGAGGGTAGAGGAGGTGTATTATGATGTGAAG ATTCGAGGACTTGTACCAGGGGAGTCCAAACAAGAGGCAGCTTAGCAAAGACTGTCGTTC CTCACCGAGTTGTTTGGATCCGTCACGCGTTTAGCAAGATCCGTCACTTGTCTAAACTGT GCTAGTTCCTGTTGGAGTCATTTGGATTCCTCTAATATCGACTGGGCTGGCCTATGCTGC CAAATTTACCCGAACCCTTCTAGAGTAGGCATGTGGCAAATATATTCAGATCTGTTCTAA TG