Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0439200-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:15754895:15755880:-1 gene:Os10g0439200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Expansin-A28. (Os10t0439200-00)
Sequence

AGGTTCTTCGCCGTCCTGGCGGCGGCGCTGTGCATCACGTCGGCCTCGGCTGCGGCGGCG
GGCGGCTGGGTGAGCGGGACGGCGACGTTCTACGGCGGGAAGGACGCGTCGGGGACGATG
GGCGGGGCGTGCGGGTACGGGAACCTGTACACGCAGGGGTACGGCGTGTACAACGCGGCG
CTGAGCACGGCGCTGTTCAACGGCGGCGCGTCGTGCGGGCAGTGCTACCTCATCATGTGC
GACGCCTCCAAGACCCCCGAGTGGTGCAAGGCCGGCACCGCCGTCACCATCACCGCCACC
AACCTCTGCCCCCCCAACTGGGCCCTCGCCAACGACGACGGCGGCTGGTGCAACCCGCCC
CGCCCCCACTTCGACATGTCCCAGCCCGCCTGGGAGACCATCGGCATCTACCGCGCCGGC
ATCGTCCCCGTCCTCTACCAACAGGTGAAGTGCTGGAGGCAGGGAGGGGTGAGGTTCACA
GTCTCCGGGTTCAACTACTTCGAGCTGGTGCTCATCACCAACGTCGCCGGCAGCGGGTCG
GTGCAGGCGATGTCGGTGAAGGGGAGCAAGACGGGGTGGATACCGCTGGCGAGGAACTGG
GGCGCGAACTGGCAGTGCAACTCGGCGCTCGTCGGGCAGGCGCTGTCGTTCCGGGTCACC
TCCACCGGCGGCCAGACGCTGCAGATCAACAGCGTCGTGCCGGAGTGGTGGGAGTTCGGG
ACGACCTTCACCAGCA

Peptide Sequence

PEP ID

Os10t0439200-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:15754895:15755880:-1 gene:Os10g0439200 transcript:Os10t0439200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Expansin-A28. (Os10t0439200-00)
Sequence

RFFAVLAAALCITSASAAAAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAA
LSTALFNGGASCGQCYLIMCDASKTPEWCKAGTAVTITATNLCPPNWALANDDGGWCNPP
RPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGS
VQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWWEFG
TTFTS

Transcript Sequence

Transcript ID

Os10t0439200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:15754895:15755880:-1 gene:Os10g0439200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Expansin-A28. (Os10t0439200-00)
Sequence

CAGGTTCTTCGCCGTCCTGGCGGCGGCGCTGTGCATCACGTCGGCCTCGGCTGCGGCGGC
GGGCGGCTGGGTGAGCGGGACGGCGACGTTCTACGGCGGGAAGGACGCGTCGGGGACGAT
GGGCGGGGCGTGCGGGTACGGGAACCTGTACACGCAGGGGTACGGCGTGTACAACGCGGC
GCTGAGCACGGCGCTGTTCAACGGCGGCGCGTCGTGCGGGCAGTGCTACCTCATCATGTG
CGACGCCTCCAAGACCCCCGAGTGGTGCAAGGCCGGCACCGCCGTCACCATCACCGCCAC
CAACCTCTGCCCCCCCAACTGGGCCCTCGCCAACGACGACGGCGGCTGGTGCAACCCGCC
CCGCCCCCACTTCGACATGTCCCAGCCCGCCTGGGAGACCATCGGCATCTACCGCGCCGG
CATCGTCCCCGTCCTCTACCAACAGGTGAAGTGCTGGAGGCAGGGAGGGGTGAGGTTCAC
AGTCTCCGGGTTCAACTACTTCGAGCTGGTGCTCATCACCAACGTCGCCGGCAGCGGGTC
GGTGCAGGCGATGTCGGTGAAGGGGAGCAAGACGGGGTGGATACCGCTGGCGAGGAACTG
GGGCGCGAACTGGCAGTGCAACTCGGCGCTCGTCGGGCAGGCGCTGTCGTTCCGGGTCAC
CTCCACCGGCGGCCAGACGCTGCAGATCAACAGCGTCGTGCCGGAGTGGTGGGAGTTCGG
GACGACCTTCACCAGCA