Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0438100-00
CDS Infomation	cds chromosome:IRGSP-1.0:10:15695559:15696486:1 gene:Os10g0438100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:S-PHASE KINASE-ASSOCIATED PROTEIN1-LIKE PROTEIN 2, Oryza sativa SKP1-like gene 2 description:Similar to Fimbriata-associated protein (Fragment). (Os10t0438100-00)
Sequence	ATGGCCTCCACAACCGCCGCCGCCGAGGACCACAAGGGCAAGCGCCCCCTGCCGCCGGAG GAGGCGGACGAGGCAGCGGCTGCGCCGCCCCCCGCCGCCGCGGAGGAGGAGGGCGAGAAG CTGGTGCTGGTGTCGGACGACGGCGTGGAGGTGCTCGCGTCGGTGGCGGCGGCGCGGGTG TCGAAGACGCTCCGCGGCATGATCGAGGACGAGTGCGCCACGGGCGCCATCCCCATCGCC GGCGTCCACTCCGACGTGCTCGCCCTCCTCGTCGAGTACTGCGAGAGGCACGCGCCGCAC TACGACCCGGAGGCCTCCGACCGCGACCGCTACCCGTTCCCGCCCTTCCCCGTCGAGCTC CCCCCCACCGCCTCCTCCATCAAGCCCGTCACCTTCGTCGACCCCGACGCCGACCCGCAC GGCCTCAAGGCGTTCGACAAGAAGTTCCTCGACGTCGACAACTCCACCCTCTTCGAGATC ATCATGGCTGCCAACTACCTGAACATCGAGGAGCTGCTCGACGACGCGTGCACCGCGGTG GCGGACAAGATGAGGGGGAAGAAGCCGGAGGAGATCCGCGACATCTTCGAGATCGAGAAC GACTACACGCCGGAGCAGGAGGCGGAGGTCAGGAGGGAGAACGCCTGGGCCTTCGAGGAC TGA

Peptide Sequence

PEP ID	Os10t0438100-00
PEP Infomation	pep chromosome:IRGSP-1.0:10:15695559:15696486:1 gene:Os10g0438100 transcript:Os10t0438100-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:S-PHASE KINASE-ASSOCIATED PROTEIN1-LIKE PROTEIN 2, Oryza sativa SKP1-like gene 2 description:Similar to Fimbriata-associated protein (Fragment). (Os10t0438100-00)
Sequence	MASTTAAAEDHKGKRPLPPEEADEAAAAPPPAAAEEEGEKLVLVSDDGVEVLASVAAARV SKTLRGMIEDECATGAIPIAGVHSDVLALLVEYCERHAPHYDPEASDRDRYPFPPFPVEL PPTASSIKPVTFVDPDADPHGLKAFDKKFLDVDNSTLFEIIMAANYLNIEELLDDACTAV ADKMRGKKPEEIRDIFEIENDYTPEQEAEVRRENAWAFED

Transcript Sequence

Transcript ID	Os10t0438100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:15695559:15696486:1 gene:Os10g0438100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:S-PHASE KINASE-ASSOCIATED PROTEIN1-LIKE PROTEIN 2, Oryza sativa SKP1-like gene 2 description:Similar to Fimbriata-associated protein (Fragment). (Os10t0438100-00)
Sequence	GGTTCAGTTCCGTTCCCCTTCTCCATAAAACGCAACGAAACGAAACGAAACCCCCCAAAT CCCCCAAACCCCCACGAAGAAGTAGAAGAGAGAAAAAAGCTCTCATCAATCCCACACCCA TGGCCTCCACAACCGCCGCCGCCGAGGACCACAAGGGCAAGCGCCCCCTGCCGCCGGAGG AGGCGGACGAGGCAGCGGCTGCGCCGCCCCCCGCCGCCGCGGAGGAGGAGGGCGAGAAGC TGGTGCTGGTGTCGGACGACGGCGTGGAGGTGCTCGCGTCGGTGGCGGCGGCGCGGGTGT CGAAGACGCTCCGCGGCATGATCGAGGACGAGTGCGCCACGGGCGCCATCCCCATCGCCG GCGTCCACTCCGACGTGCTCGCCCTCCTCGTCGAGTACTGCGAGAGGCACGCGCCGCACT ACGACCCGGAGGCCTCCGACCGCGACCGCTACCCGTTCCCGCCCTTCCCCGTCGAGCTCC CCCCCACCGCCTCCTCCATCAAGCCCGTCACCTTCGTCGACCCCGACGCCGACCCGCACG GCCTCAAGGCGTTCGACAAGAAGTTCCTCGACGTCGACAACTCCACCCTCTTCGAGATCA TCATGGCTGCCAACTACCTGAACATCGAGGAGCTGCTCGACGACGCGTGCACCGCGGTGG CGGACAAGATGAGGGGGAAGAAGCCGGAGGAGATCCGCGACATCTTCGAGATCGAGAACG ACTACACGCCGGAGCAGGAGGCGGAGGTCAGGAGGGAGAACGCCTGGGCCTTCGAGGACT GAAGGGAGAGGAAGGCTTGGCTTGTTCTGACTAT