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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0437900-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:15688756:15689850:1 gene:Os10g0437900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein Hsp20 domain containing protein. (Os10t0437900-00)
Sequence

ATGGATCAGGCAGCAGCAGCAGCAGCATCTGGCTCTCGCTCCCGTGTCCTGTCTGAAATC
GACCCCCACAGCGAATGGATTCACGGTGACGAGTTCGACACGCTCGTCCTCGACGTTACA
GGGTTCAGCAAGGACCATCTCAAGGTCCAGGTGGAGGCGTCGGGGAGCCTCAGGATCAGC
GGCGAGCGCGCCGTCAACGGCGGCGGCCGCCATTGGCTCCACTTCCTCAAGCGCTTCGAC
CTCCCTCCCGGCGCCGCCGACGACGCGTCGGCGATCAAGGTCCAGCTCGACAAGGGCGTC
CTCTACGTCCAGGTGCCCGGCCCCGGCGCTCCCGCCGCCGCCGGCGGCAGCGACGGCGAG
CAGCAGCAGCAGCAGGAGGGAGAGATCGCCGGCGGCCGCCGCCGCGCGGCGGCGGCGAGG
CGCGGCGGGCACCCGGCGTGGCAGCTCGCCGGGGCGCTGAGCCGGCACCGGCAGGTCGTC
CTCAACGTCGTGATCGCCGTCGTCTTGCTCTGGCTCGTCACGTTCGCCAACAAACTGACC
AAGAACGAGTGA

Peptide Sequence

PEP ID

Os10t0437900-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:15688756:15689850:1 gene:Os10g0437900 transcript:Os10t0437900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein Hsp20 domain containing protein. (Os10t0437900-00)
Sequence

MDQAAAAAASGSRSRVLSEIDPHSEWIHGDEFDTLVLDVTGFSKDHLKVQVEASGSLRIS
GERAVNGGGRHWLHFLKRFDLPPGAADDASAIKVQLDKGVLYVQVPGPGAPAAAGGSDGE
QQQQQEGEIAGGRRRAAAARRGGHPAWQLAGALSRHRQVVLNVVIAVVLLWLVTFANKLT
KNE

Transcript Sequence

Transcript ID

Os10t0437900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:15688756:15689850:1 gene:Os10g0437900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein Hsp20 domain containing protein. (Os10t0437900-00)
Sequence

AAAATAGCACAAGCAAAATGGATCAGGCAGCAGCAGCAGCAGCATCTGGCTCTCGCTCCC
GTGTCCTGTCTGAAATCGACCCCCACAGCGAATGGATTCACGGTGACGAGTTCGACACGC
TCGTCCTCGACGTTACAGGGTTCAGCAAGGACCATCTCAAGGTCCAGGTGGAGGCGTCGG
GGAGCCTCAGGATCAGCGGCGAGCGCGCCGTCAACGGCGGCGGCCGCCATTGGCTCCACT
TCCTCAAGCGCTTCGACCTCCCTCCCGGCGCCGCCGACGACGCGTCGGCGATCAAGGTCC
AGCTCGACAAGGGCGTCCTCTACGTCCAGGTGCCCGGCCCCGGCGCTCCCGCCGCCGCCG
GCGGCAGCGACGGCGAGCAGCAGCAGCAGCAGGAGGGAGAGATCGCCGGCGGCCGCCGCC
GCGCGGCGGCGGCGAGGCGCGGCGGGCACCCGGCGTGGCAGCTCGCCGGGGCGCTGAGCC
GGCACCGGCAGGTCGTCCTCAACGTCGTGATCGCCGTCGTCTTGCTCTGGCTCGTCACGT
TCGCCAACAAACTGACCAAGAACGAGTGA