Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0437100-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:15629460:15635858:-1 gene:Os10g0437100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cationic amino acid transporter 7 description:Amino acid/polyamine transporter I family protein. (Os10t0437100-01)
Sequence	ATGGCGAGGCGCCTCTCGTGGCAGGATTTGCAGGCGTCGGGCTCGGCCATCGCGACCCGC CTCTCGCTGCAGGACTTGCAGTGCCTGGTGCGGAGGAAGCCGGCGTGCTCCGCCGCCGAC CGCGCCGAGTCCTCGGCGGCGGGGGCGCCGGCCGGTGGGGGCAAAGGGCGGCACCTCGCC AAGGCGCTGTCCGTTCCTGACCTCATCGCCATCGGTGTTGGCTCAACGATTGGTGCCGGC ATCTATGTCCTGGTAGGAACTGTGGCTCGTGAGCATGCAGGACCAGCCTTGACCCTTTCC TTTCTGATAGCTGGCATAGCAGCTGCTCTTTCAGCATTGTGCTATGCAGAGCTCTCTTGC CGTTTTCCATTGGCGGGAAGTGCCTATCACTACTCATACATTTGCATTGGAGAAAGTGTC GCTTGGTTGATTGGTTGGGCTCTGATTCTGGAGTACACAATTGGTGGGTCATCAGTGGCT CGTGGCATTTCTCCGAACTTGGCTCTATTTTTTGGTGGCCATGAGAAGCTTCCCTTTTTC CTAACACAAATACATGTTAAATGGTTTGAAACCCCGCTTGATCCTTGTGCTGCTATTCTT GTATTGATAGTTACTGCATTACTTTGCCTGGGAATTAAGGAGAGTTCATTTGTGGAAGGC ATCATCACCATTGCAAATGTTATAGTTATGCTGTTCGTCATTTGTGCTGGTGGATACTTA GCATTCCAGAATGGCTGGAGTGGCTATAATGATGAACAAGGTTACTTCCCTAAAGGTGTG GCTGGTGTTCTATCTGGATCAGCAACCCTCTTCTTTGCCTATATTGGCTTTGATGCAGTT GCTAGCACAGCTGAAGAGGTGAAGAATCCCCAACGTGATCTTCCATGGGGAATGTGTCTG ACCTTGTCCTTGTGCTGCTTCCTCTACATGATGGTTTCTATTGTTATTGTTGGCTTGGTG CCATATTATGCATTGGATCCTAACACTCCTATTTCATCTGCTTTTGCTAAATATGGAATG CAATGGGCAGTGTACATTATTTCCACTGGGGCTGTTTTTGCTCTTATAGCATCCTTGATA GGTGCTATTCTCCCTCAGCCAAGAATTGTGATGGCTATGGCAAGAGATGGATTGCTTCCA CCACTCTTTTCAGCTGTTGATCCAACGACCCAAGTCCCAACCTTGAGCACAATATTGTCA GGGATATGTGCTGCTATCCTGGCTCTTTTCATGGACGTCTCAGAATTGGCAGGGATGGTA AGCGTGGGCACACTATTGGCATTTACTATGGTTGCCATTTCTGTTTTAATAGTGCGATAT GCTCCTCCAAATGAGATAGCAACGAAAGTGGCTCTTCCAGGTTCATCTGAATCACTAACT TCAGACTCTGGGTATTCAGAACCAGATGAGGAAAATTCGGAGGATCTTTTGGGCAACGTT CAAGACATACCTACTGCCAATGAAGCCAACAAGATAAGGCGACAGAAAGCCATAGCATGC ATTATACTAATTTTTCTTGGGGTTGTCACCATTGTTTCTTCAGTTTCTTTCTCCTTTTTT CCGTTATTTTTGCGATCCATTGCAGGTGCCTTTGGTAGTTTGCTTTTGGTTAGTGCTACC ATTGCACTCTGGTTCATTGGGCAAGACAAGAGCTCTTTAAGACAAACCGGAGGTTTTATG TGCCCATTTGTTCCTATACTTCCAGTATGTTGCATTCTCATCAACGTATACCTGCTTATG AACCTTGGGATTCATACGTGGATTCGTGTTTCGATGTGGCTAGCGGTTGGTGCCATCATA TACGTCTTCTATGGGAGGAAGTACAGCTCACTGACAGGGGTAGCCTATCAACGGATTTCA CCTGCATAG

Peptide Sequence

PEP ID	Os10t0437100-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:15629460:15635858:-1 gene:Os10g0437100 transcript:Os10t0437100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cationic amino acid transporter 7 description:Amino acid/polyamine transporter I family protein. (Os10t0437100-01)
Sequence	MARRLSWQDLQASGSAIATRLSLQDLQCLVRRKPACSAADRAESSAAGAPAGGGKGRHLA KALSVPDLIAIGVGSTIGAGIYVLVGTVAREHAGPALTLSFLIAGIAAALSALCYAELSC RFPLAGSAYHYSYICIGESVAWLIGWALILEYTIGGSSVARGISPNLALFFGGHEKLPFF LTQIHVKWFETPLDPCAAILVLIVTALLCLGIKESSFVEGIITIANVIVMLFVICAGGYL AFQNGWSGYNDEQGYFPKGVAGVLSGSATLFFAYIGFDAVASTAEEVKNPQRDLPWGMCL TLSLCCFLYMMVSIVIVGLVPYYALDPNTPISSAFAKYGMQWAVYIISTGAVFALIASLI GAILPQPRIVMAMARDGLLPPLFSAVDPTTQVPTLSTILSGICAAILALFMDVSELAGMV SVGTLLAFTMVAISVLIVRYAPPNEIATKVALPGSSESLTSDSGYSEPDEENSEDLLGNV QDIPTANEANKIRRQKAIACIILIFLGVVTIVSSVSFSFFPLFLRSIAGAFGSLLLVSAT IALWFIGQDKSSLRQTGGFMCPFVPILPVCCILINVYLLMNLGIHTWIRVSMWLAVGAII YVFYGRKYSSLTGVAYQRISPA

Transcript Sequence

Transcript ID	Os10t0437100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:15629460:15635858:-1 gene:Os10g0437100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cationic amino acid transporter 7 description:Amino acid/polyamine transporter I family protein. (Os10t0437100-01)
Sequence	GGTCCCCTCCCCTCAGCCACTCGTCGTCCCTCGGCCATGGCGAGGCGCCTCTCGTGGCAG GATTTGCAGGCGTCGGGCTCGGCCATCGCGACCCGCCTCTCGCTGCAGGACTTGCAGTGC CTGGTGCGGAGGAAGCCGGCGTGCTCCGCCGCCGACCGCGCCGAGTCCTCGGCGGCGGGG GCGCCGGCCGGTGGGGGCAAAGGGCGGCACCTCGCCAAGGCGCTGTCCGTTCCTGACCTC ATCGCCATCGGTGTTGGCTCAACGATTGGTGCCGGCATCTATGTCCTGGTAGGAACTGTG GCTCGTGAGCATGCAGGACCAGCCTTGACCCTTTCCTTTCTGATAGCTGGCATAGCAGCT GCTCTTTCAGCATTGTGCTATGCAGAGCTCTCTTGCCGTTTTCCATTGGCGGGAAGTGCC TATCACTACTCATACATTTGCATTGGAGAAAGTGTCGCTTGGTTGATTGGTTGGGCTCTG ATTCTGGAGTACACAATTGGTGGGTCATCAGTGGCTCGTGGCATTTCTCCGAACTTGGCT CTATTTTTTGGTGGCCATGAGAAGCTTCCCTTTTTCCTAACACAAATACATGTTAAATGG TTTGAAACCCCGCTTGATCCTTGTGCTGCTATTCTTGTATTGATAGTTACTGCATTACTT TGCCTGGGAATTAAGGAGAGTTCATTTGTGGAAGGCATCATCACCATTGCAAATGTTATA GTTATGCTGTTCGTCATTTGTGCTGGTGGATACTTAGCATTCCAGAATGGCTGGAGTGGC TATAATGATGAACAAGGTTACTTCCCTAAAGGTGTGGCTGGTGTTCTATCTGGATCAGCA ACCCTCTTCTTTGCCTATATTGGCTTTGATGCAGTTGCTAGCACAGCTGAAGAGGTGAAG AATCCCCAACGTGATCTTCCATGGGGAATGTGTCTGACCTTGTCCTTGTGCTGCTTCCTC TACATGATGGTTTCTATTGTTATTGTTGGCTTGGTGCCATATTATGCATTGGATCCTAAC ACTCCTATTTCATCTGCTTTTGCTAAATATGGAATGCAATGGGCAGTGTACATTATTTCC ACTGGGGCTGTTTTTGCTCTTATAGCATCCTTGATAGGTGCTATTCTCCCTCAGCCAAGA ATTGTGATGGCTATGGCAAGAGATGGATTGCTTCCACCACTCTTTTCAGCTGTTGATCCA ACGACCCAAGTCCCAACCTTGAGCACAATATTGTCAGGGATATGTGCTGCTATCCTGGCT CTTTTCATGGACGTCTCAGAATTGGCAGGGATGGTAAGCGTGGGCACACTATTGGCATTT ACTATGGTTGCCATTTCTGTTTTAATAGTGCGATATGCTCCTCCAAATGAGATAGCAACG AAAGTGGCTCTTCCAGGTTCATCTGAATCACTAACTTCAGACTCTGGGTATTCAGAACCA GATGAGGAAAATTCGGAGGATCTTTTGGGCAACGTTCAAGACATACCTACTGCCAATGAA GCCAACAAGATAAGGCGACAGAAAGCCATAGCATGCATTATACTAATTTTTCTTGGGGTT GTCACCATTGTTTCTTCAGTTTCTTTCTCCTTTTTTCCGTTATTTTTGCGATCCATTGCA GGTGCCTTTGGTAGTTTGCTTTTGGTTAGTGCTACCATTGCACTCTGGTTCATTGGGCAA GACAAGAGCTCTTTAAGACAAACCGGAGGTTTTATGTGCCCATTTGTTCCTATACTTCCA GTATGTTGCATTCTCATCAACGTATACCTGCTTATGAACCTTGGGATTCATACGTGGATT CGTGTTTCGATGTGGCTAGCGGTTGGTGCCATCATATACGTCTTCTATGGGAGGAAGTAC AGCTCACTGACAGGGGTAGCCTATCAACGGATTTCACCTGCATAGATCACTGTGGGGGTT GTTCATCTGTACATGGCGATTAACTTGTACAGCTTCCGTTGATTTTCCCTTTGACAAATT TCACAGTTCCAATCTTCAATGAACTATCAAAAGTCTTGAAGCTCTCAGAGATCATCTCAC AGAAATGGTCTTCATGTGTAGCCCAGCGTGTTTTGAGCAAGAATTCGAGCAAAAGCATAA CAACAGTGGCAGCAGCAGAAGCACAGCACATTGTGTAACTGCTTAGAATTTTTTGTGTCT TTCTATAGTCAGTTTTGACAGTTTTACCATCACCTGTAAATAATAAATGTTCTC