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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0436900-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:15614210:15616103:1 gene:Os10g0436900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CATION/CA2+ EXCHANGER 3 description:Sodium/calcium exchanger membrane region domain containing protein. (Os10t0436900-01)
Sequence

ATGGCAAAGCCTTCTGCCACGTCGGCGGCGGCGGCGCCGCCGGCGGCGAGGGTGCTGATC
GGTGCCAGCGTCAACGTGGCCTTCTTGCTCCTGCTCGCCTTCTTCTTCTTCATCTCGCCA
CGCGGCGGCTCGCCGCCGGAGGTGGTTTCGTCGTCGAAGGAGGTCGGGATCCGGGGGCGT
CGCGATGGCGGCGGCAGCGGCGGCGGCGGCGTGTTCCGGGTTGAGAGCTACGGGGAGAGG
TGCGAGCACGTCGGCGAGGAGGATGGCCTTGATCGCCGGCGATTCCCGCGTGGCTACGTC
GACTACCTGTACCTGTTCGACTGCGTGTTCGGCGAGGAGCGGCGGGTTCTTGGCTACGCC
GTGATGGCGGCGTGGCTCGCCGTGCTGTTCTACCTGCTCGGCGACACGGCGGCGGTGTAC
TTCTGCTCCAGCCTCGAGGGCCTCTCGCGGCTGCTCCGCCTCTCCCCGGCGATCGCCGGC
GTGACGCTCCTGTCGCTCGGGAACGGCGCGCCCGACGCGCTCTCCACCATCGCGTCGTTC
GCCTCCGGCGGGGGAGAGGGGGAGACCACCGCCGTGGGGCTCAACGGCGTGCTGGGGAGC
GCGATGCTCGTGTCCTCCGCGGTGCTCGGCGTCATCGGCGTCCGCCTCGGCGCGCGCGGG
GTCGCCGTGGACAGGGTGGACTTCTACCGCGACGCGTCTTTCCTCCTCGCCGCCCTCGCC
GCCGTGGCCGTCGTCCTCGCCGCCGGCGAGGTGACAATCTGGGGCGCCCTCGCCTTCACC
TCCCTCTACGTCGTCTACGTCGTCGCCGTCGCCTTCACCCACGGCCGCGCCCCGAGCAAA
GGCCACGGCGCGGAGGCGGACCACACGGCGGACGCCTTCTCCGAGCTCTGCAACGTCGCA
GAGACGAAGTTCTACGGCGACCAAGAACCACTCCTCCCCGACACTGCACCGCTACTCAGC
TACTACCCCGGCGACGGCGACGGCGACGGAGGCGGCGGCGGCGGCGGCTCCAAGAAGAAG
ATCAGGAGCGCGTTCTGGTCGGTGTTGCGCGCGCTGGAGCTCCCACTATGGCTTCCACGG
CGGCTGACCATCCCGGACGCGAGCAAGGAGCGGTGGAGCAAGCCGGCGGCGGTGACCGCG
GTCACCATGGCGCCCGTCCTCCTCTCCCACCTCTGCAGCCGCGCCACCGGCATCACCTCG
CCCCTCGCTGTCCTCCTCGGCGTCCTCGCCGGCGCGTCCCTCGGCGCCGTCGCCTTCTTC
ACCACCTCCCCGGACGCGCCCCCAGCCGACCACCTCGCCGCCTGGCTCGCCGCCGGGTTC
GTCATGAGCGTGGCCTGGGCGTACGCCGTGGCGACCGAGCTCCTCGCGCTGCTGGTCTCC
GCGGCGCACGTCATGGGCGTCGACTCGGCGGCGCTGGGGCTCACCGTGCTCGCGTGGGGG
AACTCCCTGGGCGACCTCGTCGCCAACCTCGCCGTGGCGTCGCGCGGCGGCGGCGGCGGG
GGCGCGCAGGTGGCCGTGGCCGGGTGCTACGGCGGGCCGGTGTTCGACGTGCTCGTGGGC
CTCGGCGTGTCGATGTTGCTGTCGTCGTGGGCCTCGCATCCGCGGCCCGTGGCAATGCCG
GCGGAGGCCGGCCCATTCCAGACGCTGGGCTTCGCCGCCGCGGGGATTTGCTGGGCCGTG
GTGGTGATGTCCAGGAGAGGGATGAGGGTGGACAGGACGCTGGGGTTTGGGCTCCTGGCC
ATTTACTTGTGCTTTCTTTGCATCAACATTTCTCAGGCACTTGGACCGGTATGA

Peptide Sequence

PEP ID

Os10t0436900-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:15614210:15616103:1 gene:Os10g0436900 transcript:Os10t0436900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CATION/CA2+ EXCHANGER 3 description:Sodium/calcium exchanger membrane region domain containing protein. (Os10t0436900-01)
Sequence

MAKPSATSAAAAPPAARVLIGASVNVAFLLLLAFFFFISPRGGSPPEVVSSSKEVGIRGR
RDGGGSGGGGVFRVESYGERCEHVGEEDGLDRRRFPRGYVDYLYLFDCVFGEERRVLGYA
VMAAWLAVLFYLLGDTAAVYFCSSLEGLSRLLRLSPAIAGVTLLSLGNGAPDALSTIASF
ASGGGEGETTAVGLNGVLGSAMLVSSAVLGVIGVRLGARGVAVDRVDFYRDASFLLAALA
AVAVVLAAGEVTIWGALAFTSLYVVYVVAVAFTHGRAPSKGHGAEADHTADAFSELCNVA
ETKFYGDQEPLLPDTAPLLSYYPGDGDGDGGGGGGGSKKKIRSAFWSVLRALELPLWLPR
RLTIPDASKERWSKPAAVTAVTMAPVLLSHLCSRATGITSPLAVLLGVLAGASLGAVAFF
TTSPDAPPADHLAAWLAAGFVMSVAWAYAVATELLALLVSAAHVMGVDSAALGLTVLAWG
NSLGDLVANLAVASRGGGGGGAQVAVAGCYGGPVFDVLVGLGVSMLLSSWASHPRPVAMP
AEAGPFQTLGFAAAGICWAVVVMSRRGMRVDRTLGFGLLAIYLCFLCINISQALGPV

Transcript Sequence

Transcript ID

Os10t0436900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:15614210:15616103:1 gene:Os10g0436900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CATION/CA2+ EXCHANGER 3 description:Sodium/calcium exchanger membrane region domain containing protein. (Os10t0436900-01)
Sequence

ATTATGCATGGCAAAGCCTTCTGCCACGTCGGCGGCGGCGGCGCCGCCGGCGGCGAGGGT
GCTGATCGGTGCCAGCGTCAACGTGGCCTTCTTGCTCCTGCTCGCCTTCTTCTTCTTCAT
CTCGCCACGCGGCGGCTCGCCGCCGGAGGTGGTTTCGTCGTCGAAGGAGGTCGGGATCCG
GGGGCGTCGCGATGGCGGCGGCAGCGGCGGCGGCGGCGTGTTCCGGGTTGAGAGCTACGG
GGAGAGGTGCGAGCACGTCGGCGAGGAGGATGGCCTTGATCGCCGGCGATTCCCGCGTGG
CTACGTCGACTACCTGTACCTGTTCGACTGCGTGTTCGGCGAGGAGCGGCGGGTTCTTGG
CTACGCCGTGATGGCGGCGTGGCTCGCCGTGCTGTTCTACCTGCTCGGCGACACGGCGGC
GGTGTACTTCTGCTCCAGCCTCGAGGGCCTCTCGCGGCTGCTCCGCCTCTCCCCGGCGAT
CGCCGGCGTGACGCTCCTGTCGCTCGGGAACGGCGCGCCCGACGCGCTCTCCACCATCGC
GTCGTTCGCCTCCGGCGGGGGAGAGGGGGAGACCACCGCCGTGGGGCTCAACGGCGTGCT
GGGGAGCGCGATGCTCGTGTCCTCCGCGGTGCTCGGCGTCATCGGCGTCCGCCTCGGCGC
GCGCGGGGTCGCCGTGGACAGGGTGGACTTCTACCGCGACGCGTCTTTCCTCCTCGCCGC
CCTCGCCGCCGTGGCCGTCGTCCTCGCCGCCGGCGAGGTGACAATCTGGGGCGCCCTCGC
CTTCACCTCCCTCTACGTCGTCTACGTCGTCGCCGTCGCCTTCACCCACGGCCGCGCCCC
GAGCAAAGGCCACGGCGCGGAGGCGGACCACACGGCGGACGCCTTCTCCGAGCTCTGCAA
CGTCGCAGAGACGAAGTTCTACGGCGACCAAGAACCACTCCTCCCCGACACTGCACCGCT
ACTCAGCTACTACCCCGGCGACGGCGACGGCGACGGAGGCGGCGGCGGCGGCGGCTCCAA
GAAGAAGATCAGGAGCGCGTTCTGGTCGGTGTTGCGCGCGCTGGAGCTCCCACTATGGCT
TCCACGGCGGCTGACCATCCCGGACGCGAGCAAGGAGCGGTGGAGCAAGCCGGCGGCGGT
GACCGCGGTCACCATGGCGCCCGTCCTCCTCTCCCACCTCTGCAGCCGCGCCACCGGCAT
CACCTCGCCCCTCGCTGTCCTCCTCGGCGTCCTCGCCGGCGCGTCCCTCGGCGCCGTCGC
CTTCTTCACCACCTCCCCGGACGCGCCCCCAGCCGACCACCTCGCCGCCTGGCTCGCCGC
CGGGTTCGTCATGAGCGTGGCCTGGGCGTACGCCGTGGCGACCGAGCTCCTCGCGCTGCT
GGTCTCCGCGGCGCACGTCATGGGCGTCGACTCGGCGGCGCTGGGGCTCACCGTGCTCGC
GTGGGGGAACTCCCTGGGCGACCTCGTCGCCAACCTCGCCGTGGCGTCGCGCGGCGGCGG
CGGCGGGGGCGCGCAGGTGGCCGTGGCCGGGTGCTACGGCGGGCCGGTGTTCGACGTGCT
CGTGGGCCTCGGCGTGTCGATGTTGCTGTCGTCGTGGGCCTCGCATCCGCGGCCCGTGGC
AATGCCGGCGGAGGCCGGCCCATTCCAGACGCTGGGCTTCGCCGCCGCGGGGATTTGCTG
GGCCGTGGTGGTGATGTCCAGGAGAGGGATGAGGGTGGACAGGACGCTGGGGTTTGGGCT
CCTGGCCATTTACTTGTGCTTTCTTTGCATCAACATTTCTCAGGCACTTGGACCGGTATG
AACTTTTTTTATTTTTTTTATTCTTTTCATAAGGGGCCCGGTTGGCCACCATTTTGTGTT
GGCCCCTCCGCGCATTGCAACGAAAATTTTAAGG